Caballeronia sp. SBC2: SBC2_55110
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Entry
SBC2_55110 CDS
T06459
Symbol
soxB
Name
(GenBank) Sarcosine oxidase subunit beta
KO
K00303
sarcosine oxidase, subunit beta [EC:
1.5.3.24
1.5.3.1
]
Organism
caba
Caballeronia sp. SBC2
Pathway
caba00260
Glycine, serine and threonine metabolism
caba01100
Metabolic pathways
Module
caba_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
caba00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
SBC2_55110 (soxB)
Enzymes [BR:
caba01000
]
1. Oxidoreductases
1.5 Acting on the CH-NH group of donors
1.5.3 With oxygen as acceptor
1.5.3.1 sarcosine oxidase (formaldehyde-forming)
SBC2_55110 (soxB)
1.5.3.24 sarcosine oxidase (5,10-methylenetetrahydrofolate-forming)
SBC2_55110 (soxB)
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Gene cluster
GFIT
Motif
Pfam:
DAO
NAD_binding_8
Thi4
Pyr_redox_3
Pyr_redox_2
FAD_oxidored
FAD_binding_2
HI0933_like
NAD_binding_9
FAD_binding_3
MCRA
Rhodanese
Trp_halogenase
Motif
Other DBs
NCBI-ProteinID:
QIE27437
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Position
pSBC2-2:54140..55384
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AA seq
414 aa
AA seq
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MSRYSIFSLLRNGMSYHENWERQWKSPEPKQEYDVVIVGGGGHGLATAYYLAKEHGVRNI
AVLEKGWIGGGNTARNTTIVRSNYLWDESAALYEKAMQLWEGLSQDLNYNVMFSQRGVMN
LAHTLQDVRDTERRVNANRLNGVDAEFLTPEQIKQIEPTINLNSRYPVLGASIQRRGGVA
RHDAVAWGFARGADQAGVDIVQNCQVTGIRRNGSQVIGVDTTKGFIKAKKVAVVAAGNTS
TLADMAGIRLPLESHPLQALVSEPIKPVVNTVVMSNAVHAYISQSDKGDLVIGAGVDQYT
GFGQRGSFHIIEGTLEAIVEMFPVFSRVRMNRQWGGIVDVSPDACPIISKTDVKGLYFNC
GWGTGGFKATPGSGWAYAHTIAKDEPHPLNAPFSIDRFYTGHLIDEHGAAAVAH
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgagccgctattcgatattcagcctgttgcgcaacggcatgtcgtatcacgagaactgg
gaacgccagtggaaaagcccggagccgaagcaggaatacgacgtggtgatcgtcggcggc
ggcggccatggcctggcgacagcctactatcttgccaaggaacatggcgtgcgcaacatc
gctgtgctcgagaaaggctggatcggcggcggtaatacggcgcgcaatacgaccatcgtg
cgctcgaattatctgtgggacgaatcggcggcgctgtacgaaaaggcgatgcagttgtgg
gaagggctttcgcaagacctgaactacaacgtgatgttcagccagcgcggcgtgatgaac
ctcgcgcatacgctgcaagatgttcgggatactgaacgtcgcgtgaacgcaaaccgtttg
aatggcgtcgatgccgaatttctcacgcctgaacagatcaagcagatcgagccgaccatc
aacctgaatagccgctatccggtgctcggtgcatccatccagcgacgcggcggcgttgct
cgtcacgacgccgtggcgtggggtttcgcgcgcggtgcggatcaggccggcgtggatatc
gtgcagaactgccaggtcacgggtatccgccgtaacggcagtcaggtgatcggcgtggat
acaacgaagggtttcatcaaggccaagaaggtcgcggtcgtggctgccggcaacacttcc
acgctcgccgatatggccggcatccggcttcccctggaaagccatccgttgcaagcgctt
gtgtccgaaccgatcaagcccgtggtcaacacggtggtgatgtcgaacgcggtgcacgcg
tatatcagccagtccgataagggcgatctcgtgatcggtgccggggtcgaccagtacacg
ggcttcggccagcgtggcagttttcacatcattgaagggacgcttgaggccatcgtcgag
atgttcccggtgttctcacgcgtgcgcatgaaccgtcagtggggcggcattgtggacgtg
tcgccggatgcgtgcccgatcatcagcaagaccgacgtgaagggcctgtacttcaactgc
ggctggggcaccggtggcttcaaggcgacaccgggttccggttgggcttacgcgcacacc
attgcgaaggacgagccgcatccgttgaacgcgccgttctccatcgaccgtttctacaca
ggtcatctgatcgacgagcacggcgctgcggccgttgcccactaa
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