Caballeronia sp. SBC2: SBC2_66290
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Entry
SBC2_66290 CDS
T06459
Symbol
tmung
Name
(GenBank) Type-4 uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
caba
Caballeronia sp. SBC2
Pathway
caba03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
caba00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SBC2_66290 (tmung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
caba03400
]
SBC2_66290 (tmung)
Enzymes [BR:
caba01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
SBC2_66290 (tmung)
DNA repair and recombination proteins [BR:
caba03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SBC2_66290 (tmung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
QIE28553
LinkDB
All DBs
Position
pSBC2-2:1293712..1294329
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AA seq
205 aa
AA seq
DB search
MATRPIGIRPDQQPERLEQCRRCLLWEAATQAVPGAGPQHALLMLVGEQPGDQEDLQGKP
FVGPAGALLDSALDEAGVDRNQVYVTNAVKHFKWEPRGKRRLHKTPAQREVDACHYWIER
ELAEHDPKVVVALGATALKSVLQKSTVKLQASMGDAIEHDGRLVIATFHPSYALRSPDAE
TRERAYSAIVEAFKHAHRLIEKHAK
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atggcgactcggcccataggcattcgccccgaccagcaaccggagcgcctcgaacaatgc
cgccgctgtctattgtgggaggcggctacgcaagctgttccgggtgcgggtccacagcat
gcgctgctgatgcttgtcggcgaacaacccggcgatcaggaagacctgcagggcaagccg
tttgtcggtcccgcaggggcgttgctggatagcgcgctcgatgaagccggcgtggaccgc
aaccaggtgtatgtaacgaacgcggtcaagcatttcaagtgggaaccgcgtggcaagcga
cgcctgcacaagacacccgcgcaacgcgaagtggacgcgtgtcactactggatcgaacgg
gaactggcggaacacgatcccaaggttgttgttgcattgggtgcgaccgcgttgaagtcc
gtgctgcaaaaatcaaccgtgaaattgcaggcttcaatgggcgatgcgatcgaacacgac
gggcgtctggtcatcgcgacctttcatccatcgtatgcgcttcgatcgcccgatgccgag
acgcgcgagcgtgcgtatagcgcgatcgtagaggcttttaaacatgcccatcgattgatt
gagaaacacgctaaataa
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