Chelonoidis abingdonii (Abingdon island giant tortoise): 116822284
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Entry
116822284 CDS
T07367
Symbol
FREM1
Name
(RefSeq) FRAS1-related extracellular matrix protein 1 isoform X1
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Pathway
cabi04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
116822284 (FREM1)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Cadherin_4
Lectin_C
Calx-beta
Motif
Other DBs
NCBI-GeneID:
116822284
NCBI-ProteinID:
XP_032631934
Ensembl:
ENSCABG00000020448
LinkDB
All DBs
Position
Unknown
AA seq
2170 aa
AA seq
DB search
MKPFENSCLFPLLAIILRCVCSSFISVNLGVKVMKGQSVFLTEDDLQFSIPREKDACKVE
VVINEPITQRVGKLTPQVFDCHFLPNEIKYTHNGCPILDDDMVMLRLYRFTETETFTETF
ILQVQLLEPDCNIIKMSTNVLEVPEFYGLSRGIDKNVLTFDYDKKTNLECTIRLAPLETL
LPAHGQLVIGEPQQEEPRGDQLHSFFPRSKHRTSQKCRSGNCVPELKMIQNTKMSCEEFL
LMGIRYQHLDPPSPDIDYIPIRLDLTDSRSKTLHKTEHAWLPVRIKGAIPNQIPRAAFMA
MFILEVDQFILSPMTTTTVDAEDSETPKSLLVFNITKPPPQGYITHLLDHTKPITSFTWK
DLSEMLIAYQPPNNSHTERRNYEVELEVHDFYFERSSPITVHISIRTTDTNAPRVSWNTG
LDLLEGQSRPITWQQFQIVDNDNIRGVRLVTVDGLQHGRLTVRGEKGFMFTVSDLRAGVV
HYHHDDSDSTKDFVVFRIFDGHHSIRHKFPINILPKDDSPPFLISNVVIELYEGQTILIQ
GSLLQASDMDSSDDYILFNITKPPQAGEIMKKPGPNLIGYPVTGFLQRDLFNGLIYYHHL
GGEIFEDSLEFVLCDSHDPPNLSEPQVVIVHIIPVDDQLPKEASGVTRHLTVEETKIAHL
TKKHLHFIDMEAQERELIYTVTTSPFFSSTHGPSDAGKLFMVDSIPKLVKDPSAPALRSF
TQHAVNYMKVAYMPPIQDIGPEPQHVQFVFSVSNQHGGTLYRICFNITVLPVDNQAPEVF
TNNLKVKEGGLCTITGSHILMSDMDTKQENLHIYLQRQPLHGMVELDGFPMHKGDRFTCQ
DLHTLKVRYQHDGSETLHDDIVFAATDGINSLEFVLQVKVLPVNDEPPIMKDGLIPLVQC
PEGEEVVITSQYIYATDADSDDMKLTFMLARQPYYGVVRKAGIVMDRFSQVDIVSGVVTY
KHTSGEIGLTPCFDTLTLVISDGEAGMDVNDCCYDGLLPPPVPPLHDSFPVYDLNISVFP
VDNQPPSIAIGAMFVVDEGFSAVITANNLFATDPDTAADDLEFVLVSPPQFGYIENTLPS
PGFEKSNTGISIASFQLKYLKALHINYVQSRHVRTEPTSDQFMIYVTDGKHHSVETPFYV
LINPTNDEVPEFIARNITVQEGQMKELDPSVINVIDLDIPQDHLMFTVVQQPQHGFLING
VYGNDIMSYKRFINSHHNRERPVHDFSMELLKNGMRLVYMHDDSENLTDGFTLQLSDGRH
KVLRTILVKIIPVNDEKPMLSKKDEIEVNMGETRIISSAVLSAEDKDTPREGIYYLFERI
PENGQLQLKVGRDWVMLQTAMKCTQEEIDMNLLRYVHTGAMGSRNQDSFTFHLWDGDNKS
PALDFYITIKDMEKGNIAVFVRPLTVSKGDRGFLTTDVLLAIDGTEKPEELLYVITLPPQ
YGQIEYASYPGVPITSFSQMDVAGQAVCYVHSSKEAAPRDLFRFIISNGLKTKHGTFEIM
LETVDQALPILSRNKGLRLVEGTMALLSPDVLQLSDADTSSKNLTFLLAQLPQYGHLCYR
GAVLLQHNFTQQDVDNMDMAYRHGGGASQIDRFTFVATDRTNEGFIVDGKVQMEPVAFTI
QVDHLDKTAPKIVHLHCSSDVELLKNGNYGIYITARSLKAYDPDTEEDQVIFKILRGPRY
GYLENVTTGGFIQEAFSQKDLNGKIILYVINPSWEVNSDSLEFQVTDPTGNSAAPQTLEL
RWSQIEMQQAEYMVCENVGMLSLKITRSGHSTDSAFIAVKVIEVTATLGKDFTVTPSKLI
QFDPGMSAKMWNIAITYDGLEEDDEVFEVVLNSPVNAILGTRTKAIVKILDSKGGQCSSF
HSSGQNKHNLWGTGTLLPVSSGSSSPFNPGTVHLEGIPLSSSKEIMVQRGDVLQEFNLVN
LSRMRLRAIRNGKIYHGLVSLRVEADTSSANANKANKSIINQGQTKINVISSRKTEVPQA
DNAELMSESHSSQQDLVFSFPKSCTPDLEGLLHFEESTQNLFQCDGISWKLWTSKNKDVN
MKKCPSGWSHHGGSCYFLITDQKVTWNTAARACREQYLGSLASVVSKQHMQWLWGFSGRK
PFWIGFNDQVSPGHWEWHGGEPVTFTNWRRSPSLLSKQGKNCVLVQRRGKWQAKDCRQVN
RHNYVCSRKL
NT seq
6513 nt
NT seq
+upstream
nt +downstream
nt
atgaagccttttgagaatagctgtttgtttccactgctcgccattatcctgagatgcgtc
tgctcctccttcatcagtgtcaaccttggggtgaaagtgatgaagggccagtctgtcttc
ctgacagaagatgacctgcagttttccatccccagagagaaagatgcttgcaaagtggaa
gttgtgattaatgagccaataacacagagggttgggaaactaactccgcaggtatttgat
tgtcatttccttcctaatgaaatcaagtatactcataatggctgtccaattttagatgac
gacatggtcatgcttaggctgtacagatttacagaaactgaaacattcacagaaacattc
atccttcaagtgcaattacttgagccagattgtaatatcatcaaaatgagcaccaatgtg
ctggaggtccctgagttttatggcctgtccagagggattgacaagaatgtgctcactttt
gactatgacaagaagacaaacctggagtgcaccatcagactggcccctttagaaactctt
ctaccagcccatggtcaacttgtcattggagaacctcagcaagaagagcctcgtggagat
caacttcatagcttcttccctagatccaagcacagaacaagccaaaagtgcaggagtggg
aactgtgttccagaactgaagatgattcagaacaccaaaatgagctgtgaggaatttttg
ctgatgggaattagatatcagcatcttgaccctccttcacccgacattgattatattcct
atcaggctggacctcacagacagcagaagcaaaactctgcacaagacagagcatgcatgg
ctccctgtccgaatcaaaggtgccattcccaaccaaatccccagagctgccttcatggct
atgttcatcctggaggtggatcagtttattttgagccccatgacaacaacaacggtggat
gctgaagacagtgaaacacccaaatccctgctagtgttcaacattaccaagccaccccca
caaggctacatcactcatctgttagaccatacgaagcctatcacctccttcacgtggaaa
gatctcagtgagatgcttatagcatatcagcctccaaacaacagccatacagaaaggagg
aattatgaggtggagttagaggttcatgacttctactttgaaaggagttcaccaatcact
gtgcatatctccatcagaacaacagatacaaatgctcctcgggtttcatggaatacaggc
ctcgatctcctggaagggcagtcccgaccaatcacgtggcaacagtttcaaatagtggac
aatgacaacatcagaggtgttcgcttggtcacagttgacggcttacagcatggacgtctc
actgtaagaggagaaaaaggattcatgttcacggtctctgaccttagggctggggttgtt
cattaccaccatgatgacagtgactctacaaaagattttgtggtatttaggatctttgat
ggccatcacagtattcgccataagtttccaatcaatatcctgcctaaagatgacagcccc
cctttcctgatcagcaatgttgtaattgaactgtatgaagggcagaccattctgatccag
ggctccttgcttcaagcttctgacatggactccagtgatgactacatactctttaatatt
accaaaccaccacaggctggagaaatcatgaagaaaccagggccgaaccttatagggtat
cctgtcactggcttccttcagagagatctgtttaatggactaatttattaccatcactta
ggaggagaaatatttgaggattcccttgagtttgtcctgtgtgatagccatgaccctccc
aatctctcagagccacaggtggtgatagtgcacattattccagtggatgatcagcttcca
aaagaagcttctggggttacccgtcacctcactgtcgaggaaaccaagatagctcatcta
actaagaaacatctccatttcatagacatggaagcacaagagagagaactcatctacaca
gtaaccacctccccatttttctcttctactcatggcccctctgatgctgggaagttgttt
atggtggacagcatccccaagctagtcaaggatccttctgctccagcactgagatcattc
actcagcatgctgtgaactatatgaaagttgcctatatgccccctatccaggacattggg
cctgaacctcagcatgtccagtttgttttttcagtcagtaatcagcatggaggcactttg
tataggatctgttttaatattacagttcttccagtggacaatcaagctccagaggtattt
acaaataacttgaaagtgaaagaagggggactgtgcaccattacagggagccatattctg
atgtcagatatggacacaaaacaggagaacctccacatctaccttcagaggcagccactg
catggaatggtagaactggatggatttcctatgcacaaaggtgacaggttcacctgccag
gacttgcacacattaaaagtcaggtatcagcatgatggctctgagactctgcatgatgac
atcgtctttgcagccacagatggcattaattctttagagtttgtcctacaggtcaaggta
ctacctgtaaatgatgagccacctatcatgaaagatggcctcattcctctagtacaatgt
ccagagggtgaggaagtggtcatcacctcacagtacatttatgccactgacgcagacagc
gatgacatgaaactgactttcatgctggctcgacagccctactatggggttgtgaggaaa
gctggtatcgtcatggatcgcttctcccaagtggacattgtctctggagtagtgacctac
aagcatactagtggggagattggcctgacaccttgttttgacaccctaaccttggttatc
tctgatggtgaagctggcatggatgtgaatgactgctgttatgatggacttcttcctcct
ccagtaccaccacttcatgattcctttccagtatatgaccttaacatcagtgtatttcca
gtggacaaccagccaccatccattgcaattggtgccatgtttgttgtggatgagggtttc
tcagctgtcattaccgctaacaatttgtttgctactgaccccgacaccgcagcagatgac
ttagagtttgttttggtttctcctccccagtttggttacattgaaaatacactaccttcc
cctgggtttgagaagagcaacactggtataagtatagcttcatttcagctgaaatacctg
aaagccttgcatataaattatgtgcagtccaggcatgtgaggacagaaccaacttcagac
cagtttatgatttatgtcactgatggaaagcatcattcagtggagactccattttatgtc
ctgatcaacccaacaaatgatgaagtcccagaattcatagcaaggaacataactgtgcag
gagggccaaatgaaagaactggatccctctgtaatcaacgtgattgatctggatatacct
caagatcatttgatgtttactgttgtccagcaaccccagcatggattcctcattaatgga
gtttatggcaatgatattatgagttacaaaagattcattaacagtcaccacaatcgtgaa
cgtcctgtgcatgacttttccatggagcttcttaagaatggaatgaggctggtgtacatg
cacgatgactctgaaaacctcactgatggttttacactccagctgtcagatgggagacac
aaagtcctcagaaccattctggtaaagatcatcccagttaacgacgagaagccaatgctg
agcaagaaggatgagatagaggtgaacatgggtgaaacccgaataatttctagtgctgtt
ctgtcagccgaagataaagacacccccagggagggaatttactatttatttgaaagaatt
ccagaaaatgggcagcttcagctcaaggtaggtagggattgggtgatgctccaaactgca
atgaagtgcacccaggaggaaatagatatgaaccttttgagatatgtgcatacaggcgct
atggggtccaggaaccaagatagcttcacatttcatctgtgggatggggacaacaaatcc
ccagcactggacttctacataactatcaaggatatggaaaaagggaacattgctgttttc
gtaaggccacttactgtatctaagggggatagaggtttcttgacaactgatgttctcctt
gcaattgatggaactgagaaaccagaagagctcctctatgtgataaccttgccacctcag
tatggacagatagagtatgccagctatcctggagtccctattacaagtttcagccaaatg
gatgtagcaggtcaagcagtctgctatgtccacagtagcaaggaagctgctcctcgagat
ctgttcagatttatcatcagcaacggattgaagactaaacatggaacgttcgagatcatg
ctggagacagtggatcaagctttgcccatactgtctaggaacaaggggctaagattagtg
gaaggcactatggcactcctttctcctgatgtcctgcagctttcagatgcagacacttcc
tcaaagaaccttactttcctcttggcacagctccctcaatatggccatctgtgctaccga
ggggctgtgctgctgcagcacaatttcactcagcaagatgtggacaacatggacatggca
tatagacacggaggaggggcttcccagattgacagatttacatttgttgcaacagatagg
actaatgaaggcttcatcgtagatgggaaggtgcaaatggagcctgtggcattcaccatt
caggtggaccatttggacaaaactgcaccaaaaattgttcacctccattgttcttcagat
gtggagctcctgaaaaatggcaattatgggatttacattactgccaggtccttgaaggca
tatgaccccgatacagaagaggaccaagtcatatttaagattttacgaggtcctcgttat
ggctacctggaaaatgtaacaacaggtggatttatccaggaagcattcagccaaaaggat
ttaaatggcaaaatcatactttatgtcatcaatccatcctgggaggtgaattcagacagc
ttagagtttcaggtcacagatcccactggaaactctgctgccccccaaactctggaactg
aggtggtctcaaattgaaatgcaacaggctgagtacatggtgtgtgagaatgtgggaatg
ttgtctttgaaaatcaccagatcggggcactccacagactctgcctttattgcagtgaag
gttattgaagtgactgctacattgggaaaggattttactgtgactccctctaagctcatt
cagtttgatccaggaatgtcagctaagatgtggaatatagcaattacctatgacggatta
gaggaagatgatgaggtctttgaagtagttctgaactcccctgtgaatgcaattcttggc
accaggacaaaagctatagtgaaaattctggactcaaaaggaggtcaatgcagctctttc
cactcctctggccaaaacaagcacaacttatgggggacaggcacattgcttccagtttcc
tcaggctcctcatcacccttcaaccctggcactgttcacttggaaggaatccctctgtcc
tcttccaaagagataatggtgcagagaggggatgtgttacaggaattcaacttggtgaat
ctctcaaggatgaggcttagagccatcagaaatggcaaaatatatcatggattggtctct
ctcagagtagaggctgacacctcatcagctaatgcaaacaaggctaacaagtcaataatt
aaccaagggcagacaaagataaatgtgatctcctccaggaagacagaagtcccacaagct
gataatgcagagttgatgtctgaatcacactctagccaacaggacctagtcttctccttt
ccaaagagctgcacacctgatttagaagggctcttgcattttgaagaaagtacccaaaac
ttatttcagtgtgatggaatttcgtggaagttatggacttcaaaaaacaaggatgttaac
atgaaaaaatgcccatctggatggagccatcatggcggcagctgttatttcctgatcaca
gaccagaaagtcacttggaatacagctgctcgggcttgccgggaacaataccttggaagt
ctagcaagtgtggtcagtaaacaacacatgcagtggctgtggggcttcagtggaaggaag
cccttttggataggctttaatgatcaagttagtcctggccattgggagtggcatggagga
gaacctgtcaccttcacaaactggagaagaagtccatctctcctttcaaagcaaggaaag
aattgtgttttggtccagaggcgagggaaatggcaagcaaaagactgcaggcaggttaat
aggcacaactatgtctgctcaagaaagctgtaa
DBGET
integrated database retrieval system
