Chelonoidis abingdonii (Abingdon island giant tortoise): 116828934
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Entry
116828934 CDS
T07367
Symbol
CATSPERB
Name
(RefSeq) cation channel sperm-associated protein subunit beta
KO
K16893
cation channel sperm-associated protein subunit beta
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cabi03037
]
116828934 (CATSPERB)
04040 Ion channels [BR:
cabi04040
]
116828934 (CATSPERB)
Cilium and associated proteins [BR:
cabi03037
]
Motile cilia and associated proteins
Sperm associated proteins
116828934 (CATSPERB)
Ion channels [BR:
cabi04040
]
Voltage-gated cation channels
Calcium channel, sperm-associated (CatSper)
116828934 (CATSPERB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CATSPERB
CATSPERB_2nd
CATSPERB_1st
RVT_1
HBM
Cytochrom_B558a
Motif
Other DBs
NCBI-GeneID:
116828934
NCBI-ProteinID:
XP_032643356
LinkDB
All DBs
Position
Unknown
AA seq
1347 aa
AA seq
DB search
MDSLVLYIAVGAILKMPNLSSGITYNVEVNDISRFSCYTEPLDDASPKPKVIKLYLGSQN
LKISCHLYTVNEEDTLENRKKLLLLYTSSGLAPTIEIFNSTYSGIFYFRMKLEESQSTWT
TDIPRRNITYNTDIAPIEEWFVRFTMHHRLNMFTTEGTLLDVFREPLLQWHLGKPINYTE
IDALIPDVINITVSKCPCANDVAVIALICNDTVHGIYLGVTRSGFISRETQWFNMTNSLC
SLLDDDCAGLSLVNIILTNNHLIILTTLGLFISQDLRYPTGRILNFTKPSFCGFERDDYF
SANVWYNVQCLANAESYEVDYISLSFNKDKTLSQVSTCFYSNDPYTEWYSCLPHRIHGGK
TLSRRVVAFLIDYQQNTGIGLITVQNKAMVSVYKITDHKLNRQTKFPVFWFPDPKFLPFG
MFFHPGSHFLYVYGSQVWFSDDGGNTFMLLITLENEIIIKTNTCVYSHSVAFVTDKGNIF
FTKAGLERYAKLTTSAHNVFNLYYDHLGSLNIISLNESVSDSLEIHLLDVITLIQQDDIG
FDGPLSPQYITEQQMVFFEHIPLNGKSRSVQKSRFYGLHKGKVLQYWPSGSATIVNVFHH
EYPPQYLSSVIVDVLEKFPFESEDKNSFIHNSLSILKVSDTTRVKLQLGSEYNSSEKVVS
SSLHVFKSSDIEKTVVIPGFSSFLIVEVLDSLNALADATMPERVPFNKTFTSDMWFVYDF
GTKNGRKWKIIVDSCRYWVKELNNLPLNAIKYLDLTQTFNFGFRVTPVNTAYPIFHMPLM
KLVVGNPSIFKVKAKDYWDDTDSYTMEFSVTNNFYKQGKSSMAVILTKASLVCDVSTIVL
TVKSGCSYSKSMHYISPVSISAQSWLHGDPKDPYGFKLLKQLPVNYRPPSKLGIAVPLTD
NFYNADPSKPRMRDYFAGSKLIQIKLKEDFEKFQTEKPLKAAEDRKSLKKCKQELALYRS
SLSALKNRDGESVTDQTEMEAICRDIYTQVFASRIDIPMPSLQETKEHILRVLISEVCHA
VHQMTEGKAPDLKGGININGERLNHLKFTDDVMLIVKNTAQLERMLKQLNTKSSQVGLKM
NQSRMEVLVKNEVRVNEGRDPSPSSQVVEALTSDVVQVPALPALEHGLEHVIPTSHNSGA
YKQCANKSTRAECNCNDNEKLSFFVAFSDCKEKALRMKYPVTRLPVHFRVDSENEYTPLV
SPFFVTVTEVNHRTNWEVAGTNETPSMLKMRAYLADKLNITLYNPEGLALNIYGSELFHF
RVATIPGVSFCNLLDEFQIYVDEAPLAFPGQYLVSTVTAVLVGGIIFVIFMLQIYKINIW
NKVKSKVRKKNKVSVSETSATVTSASS
NT seq
4044 nt
NT seq
+upstream
nt +downstream
nt
atggactcactggttttatatattgcagttggagcaattttaaagatgcctaatctatct
tcaggaatcacttataacgtggaagtgaatgacatttcacgtttctcttgctatactgaa
ccattagatgatgcaagcccaaagcccaaggtcattaaattgtaccttggttcacaaaat
ttgaaaatcagttgtcatttatatactgtaaatgaggaggatactttggagaacagaaaa
aagcttcttctgctatatacctcgtcagggcttgctcccaccattgagatcttcaacagt
acctattctgggatcttctacttcagaatgaagctggaagaaagtcagtctacctggact
actgatatccccagaagaaatattacatataatacagatattgctccaatagaggaatgg
tttgtaagattcaccatgcatcatagattaaacatgtttactactgaaggaacactacta
gatgtttttagagagcctcttcttcagtggcaccttggcaaaccaataaactatactgaa
attgatgctctaatacccgatgtaataaatatcacagtgtcaaaatgcccctgcgctaat
gatgtggcagtaattgctcttatatgcaacgatacagtacatggaatttatttaggagtt
acccggtctggatttatctctcgagaaacacagtggttcaatatgacaaacagcctgtgt
agtctcctagacgatgactgtgctggcctttcacttgtgaatataatcttaacgaacaat
catttaataatcctcactacattgggccttttcatcagtcaagatctacgctatccaact
ggaaggattttaaatttcaccaaaccaagcttctgtggctttgaaagggatgattatttc
agcgcaaatgtatggtataatgtgcaatgtctagctaatgcagagagctatgaagtggat
tacattagtctctcattcaacaaagataagacattaagccaggtatctacctgtttctat
agtaatgatccatatacagaatggtacagttgcttgccccatagaattcatggtggaaag
acactttctagacgagtagtggcatttcttattgactatcagcagaacactggaataggt
cttataactgttcagaataaagcaatggtctcggtgtacaagataacagaccacaaattg
aacaggcaaacaaaatttccagtgttctggtttccagaccctaagtttttgccttttgga
atgttttttcacccaggaagtcactttctctatgtttatggaagccaggtctggttttct
gatgatggaggcaacacttttatgttgctaatcactctggagaatgaaataattataaaa
acaaatacgtgtgtttatagtcactcagtggcatttgtgacggacaagggaaacatcttc
tttactaaggcaggtttagaaagatatgccaagcttacgacatcagcacacaatgttttc
aatttgtactatgaccacttggggtctttaaacataatttctctgaatgaatcagtctct
gatagtctggaaatacacctgcttgatgttatcactctaatacagcaggatgacataggt
tttgatggcccattgtcgccacaatacatcactgaacagcaaatggtattttttgaacat
atcccattgaatggaaaatcaagaagtgttcaaaagtcaagattttatggtctgcacaaa
ggcaaggttttacaatattggccaagtggatcagctacaatagtaaatgttttccatcat
gaatatcctccacaatatttatcctctgtcatcgtagatgttctggaaaagtttcccttt
gaatctgaagataaaaactcctttatacataattctttaagtattctgaaggtgtcagac
accaccagagttaagcttcaacttggttctgaatataatagttcggagaaggttgtttct
tcaagtcttcatgtatttaaatcttctgatattgagaagactgtggtgattcctggcttt
agcagcttcctgattgttgaagttctggatagtctgaatgctttggcagatgctaccatg
cctgagagagtgcctttcaacaaaacctttacctcagacatgtggtttgtgtatgacttt
ggcactaagaatggaagaaaatggaagattatagtagacagctgtagatactgggtaaaa
gaacttaataatctaccactgaatgccattaaatacctggatcttacccaaaccttcaat
tttggattcagagtaacccctgttaatacagcctatccaatctttcacatgccactaatg
aagctagtagttggaaatccatccatatttaaagtgaaggcaaaggattactgggatgac
actgatagttacaccatggaattctctgttactaacaatttttacaaacaaggtaaatct
tcaatggctgtcattctcacaaaagcatcacttgtttgtgatgtgtcaacaattgtgcta
acagtgaagagtggctgttcgtacagtaaatcgatgcactacatttctccagtttcaatc
tctgcccagagttggctgcatggagacccaaaagacccatatggtttcaaactcttaaaa
cagttgccggtaaactacaggcctccgtctaaactgggaatagctgttccactcactgat
aacttttataatgctgaccccagcaaacctagaatgagagattattttgctggatcaaaa
ctcatacaaattaagttgaaggaagacttcgagaaatttcaaaccgaaaagcccctaaag
gctgctgaagatcgtaaaagtctcaaaaaatgcaaacaggaattggcattgtacaggtca
tcattatcagctttgaaaaacagggatggagaatcagtaactgatcaaacagagatggag
gcaatctgcagggatatctatacccaggtgtttgcatctcgtatagacatcccaatgcca
tcacttcaggaaaccaaagaacacatacttcgggttctcattagtgaagtctgtcacgca
gtccatcaaatgacagaggggaaggctccagacttgaaaggtgggattaatatcaatgga
gagcggctaaaccatctcaagttcacagatgatgtaatgctgatagttaaaaatacagcc
cagcttgagagaatgcttaaacaactgaacacgaaaagtagtcaagttggattaaaaatg
aatcaatccaggatggaagttctggtgaaaaatgaggtgagagtgaatgaaggaagagac
ccatccccgagtagccaggtggttgaggcactcacatcggatgtggttcaagtccctgct
ctgcctgctttggaacacggacttgaacatgtgattcccacatctcataattctggagcc
tacaagcagtgtgctaacaagtcaactcgagcagaatgtaactgcaatgataacgagaaa
ctttccttttttgttgctttctcagattgcaaggagaaggctttgaggatgaaatatcca
gttacaagacttccagtccatttcagagttgacagtgagaatgaatatacaccactggta
tctcccttttttgtcacagtcacagaggttaaccataggacaaactgggaagttgcaggt
accaatgaaacaccaagcatgttaaaaatgagagcatatttagctgataaactcaacatt
acactgtataatccagaaggcctagccctaaacatatatgggtctgagctttttcatttc
agggtagcaactattcctggagtctccttttgtaatctacttgatgaatttcagatttat
gttgatgaagctcctttggccttcccaggacaatatcttgttagcacagtaacagctgta
ttagtaggaggcatcatctttgtcatatttatgctgcaaatatataaaataaacatatgg
aacaaagtgaaaagtaaagtgaggaaaaagaacaaagtatcggtgtctgaaacctcagca
actgttacttctgcttcttcctag
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integrated database retrieval system
