Chelonoidis abingdonii (Abingdon island giant tortoise): 116829167
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Entry
116829167 CDS
T07367
Symbol
GTF2H4
Name
(RefSeq) general transcription factor IIH subunit 4 isoform X1
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Pathway
cabi03022
Basal transcription factors
cabi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
116829167 (GTF2H4)
09124 Replication and repair
03420 Nucleotide excision repair
116829167 (GTF2H4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cabi03021
]
116829167 (GTF2H4)
03400 DNA repair and recombination proteins [BR:
cabi03400
]
116829167 (GTF2H4)
Transcription machinery [BR:
cabi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
116829167 (GTF2H4)
DNA repair and recombination proteins [BR:
cabi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
116829167 (GTF2H4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
fvmJAB_N
Motif
Other DBs
NCBI-GeneID:
116829167
NCBI-ProteinID:
XP_032643735
Ensembl:
ENSCABG00000018923
LinkDB
All DBs
Position
Unknown
AA seq
489 aa
AA seq
DB search
MIHSQCIVSFHCRWPGWFSLFFVPFLFMVMDSVMKLQRVQLKCKNLHEFLRGLSPGILDR
LYNHPATCLAVFRELPGLAKNYVMRMLFLEQPLPQAAVALWVKKEYVKEQEESSDILLGL
RLWHTQLLPGGLQGLVLNPIFKENLRIALLGGGKAWSDDTSQLGPDKHARDVPSLDKYAE
ERWEVILHFMVGSPSAAVSQDLAQLLIQAGLMKSSEPGEPPCITSAGFQFLLLDTSSQLW
YFMLQYLQSAETRGMDLVEILSFLFQLSFSTLGKDYSVEGMSDSLLNFLQHLREFGLVFQ
RKRKSRRYYPTRLAINLSSGISGTTTDTHNQGFIVVETNYRVYAYTDSELQIALIALFSE
MQYRFPNLVVAHVTRESIQQAIANGITAEQIIHFLRTRAHPVMLRQTPVLPPTITDQIRL
WELERDRLRFSEGVLYNQFLSQVDFELLRNHARDLGVLVFENPAKRLMVVTPAGHSDVKR
FWKRQKQSS
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgatccactcacagtgcattgtttctttccattgtcgatggcccggctggttcagcctc
ttttttgttccctttctgtttatggtgatggactccgtgatgaagctgcagagggtgcag
ctgaaatgcaagaacctgcacgaattcctgcggggactgagcccaggaatcctggatcgg
ctttacaaccaccctgccacctgcctggctgtgttccgtgagctgccgggattggccaag
aactatgtgatgcggatgctcttcctggagcagcccctccctcaggctgccgtggcatta
tgggtaaagaaggaatacgtcaaggagcaggaggagagctctgacatcctgctggggctg
cggctctggcacacccagctactcccagggggcttgcaggggctggtcctgaaccccatc
ttcaaggagaacctgcgcatcgccttgctgggcgggggcaaggcctggtccgatgacacc
agccagctgggaccagacaaacacgcgcgggatgtcccatcgctggataaatatgctgag
gagaggtgggaggtgatcctgcatttcatggtgggctcccccagcgccgcggtcagccag
gacctcgcccagctcctcatccaagccgggctgatgaagagcagcgaacccggagagccc
ccctgcatcacctccgccggcttccagttcttgctgctggacacgtcctcccagctctgg
tacttcatgctgcagtacctgcagtccgctgagacccggggcatggacctagtggagatc
ctgtccttcctcttccagctcagcttctccacccttggcaaggattactcggtggaggga
atgagcgactcgctgctcaattttcttcaacaccttcgggaatttggtctggtcttccag
aggaagaggaagtcgcggcgctattaccccacccgcctggccattaacttgtcctcagga
atctccggcacaaccacggacacccacaaccagggcttcattgtggtagagaccaattac
agggtctacgcctacacagactcggagctgcagattgcgctcatcgcactcttctccgag
atgcagtatcgcttccccaacctggtggtggcccacgtgacccgcgagagcatccagcag
gccatcgccaatggcatcacagccgagcagatcatccacttcctacggaccagagcgcat
cccgtgatgctgagacagaccccagtgctgcccccgaccatcacggatcagatccggctc
tgggagctggagcgcgaccggctgcgcttctccgagggggtgctgtacaaccagttcctg
tcccaggtggactttgagctgctgcggaaccacgcgcgggacctgggcgtgctggtcttc
gagaacccggccaagcgcctcatggtggtgacacctgccggccactctgacgtcaagcgc
ttctggaagaggcagaagcagagctcctga
DBGET
integrated database retrieval system
