Chelonoidis abingdonii (Abingdon island giant tortoise): 116830070
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Entry
116830070 CDS
T07367
Symbol
SAMHD1
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1 isoform X1
KO
K22544
deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Pathway
cabi03250
Viral life cycle - HIV-1
cabi04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
116830070 (SAMHD1)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
116830070 (SAMHD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cabi03400
]
116830070 (SAMHD1)
DNA repair and recombination proteins [BR:
cabi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
116830070 (SAMHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HD
HD_assoc_2
PDEase_I
Motif
Other DBs
NCBI-GeneID:
116830070
NCBI-ProteinID:
XP_032645182
Ensembl:
ENSCABG00000017326
LinkDB
All DBs
Position
Unknown
AA seq
632 aa
AA seq
DB search
MFLLSFVLNLISSLTLERDIVTSEEDVTLRTWVCSPLPSANLSTRPLVTVIQLVDREPIF
SYDKLEDPDETSALHREVSLDRSLRFHSPSRYDFSKGPLELRLKLLVCLQKLEQNHADIM
KVFNDPIHGHIEIHPLLVRIIDTPQFQRLRYIKQLGGTYYVFPGASHNRFEHSLGVGYLA
GCLVRALHERQPELEINQRDILCVQIAGLCHDLGHGPFSHMFDGRFIPLARPGLKWKHET
ASVQMFEHLITSNGLEKVMEDYGFVLKEDMDFIKEQIGGPLDTTPCRGLWPYRGRPEEKN
FLYEIVANKRNGIDVDKWDYFARDCHHLGIQNNFDYKRFLKFARVCEVKNKKHICTRDKE
VGNLYDMFHTRNCLHRRAYQHKVGNIIETMITDAFLKADPYIKIEGTGGKHYKISTAMED
MEAYTKLTDNIFLEILYSSNKELAEAREILRKIELRDLYKYLGETRTEPGKEITEDQYDT
LPADIAASRPKNAPQDVELNAEDFIVDVINMDYGMKEQNPIDKVRFYCKSDPSQAVKISK
EQVSRLLPETFAEQLIRVYCKKKDEKSLDAATKCFIQWCMNKDFTKPQDGDVVAPELTPM
KASWNDPDEDELQSPNDRREASKSRTRLSFNN
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgtttttgctttcctttgtcctcaatctcatttcaagtctgactttagagagagacatt
gttacatcagaagaagatgtcaccttgaggacatgggtctgctctcctcttccatctgca
aacctgagtacccgtccattggtaacagtgattcagctggtcgaccgagaaccaatcttc
tcatacgataagttggaggacccagatgagacttcagccctacatagggaagtgagtctg
gacagaagcctgaggttccattctccatccagatatgatttttctaagggacccttggaa
ttgagactgaaattgcttgtttgcctgcaaaaactagaacaaaatcatgctgatataatg
aaggtttttaatgatcctattcacggccatattgaaatacatcctctcctcgttcgaatc
attgacacacctcagtttcaacgcctgcgatatataaaacagctgggaggtacttactat
gttttcccaggagcatcacacaaccgctttgaacactccttgggggtaggctatctggca
ggatgtctggtccgggcattacacgaaagacagccagagctggaaataaaccagcgagat
atactctgtgttcagattgctggactttgtcacgatttgggtcatggaccattttcacac
atgtttgatggaagatttattccacttgctcgcccaggtctgaaatggaagcatgaaact
gcttctgttcagatgtttgaacacctgattacttccaatgggctagaaaaagtcatggaa
gattatggttttgtcctgaaagaagatatggacttcatcaaagaacaaataggaggaccc
ctagatacaaccccatgtcggggtttgtggccataccgtggtcgaccagaagagaaaaac
ttcctttatgagatagtggctaacaaaagaaatggcatcgatgttgacaaatgggattac
tttgccagggattgccatcacttaggaatccagaataattttgattataagcgcttcctt
aaattcgctcgggtctgtgaagtgaaaaacaagaagcatatctgtacccgtgacaaggag
gttggaaatctgtatgacatgttccatacacggaattgtttgcaccgcagagcttaccaa
cacaaggttggcaacatcattgaaacaatgattacagatgcctttctaaaagcagatccc
tatattaaaatagagggcactggtggaaaacactacaagatttctacagcaatggaggat
atggaagcgtacactaagctaacagataacatctttctggagattctgtactccagtaat
aaagagctggctgaggcacgagaaattttgcgtaaaatagagcttcgtgatctatataag
tatttaggagagactcggactgaaccaggaaaagaaattacagaggatcagtatgacacg
ctgccagctgacattgctgcttccagaccaaagaatgcacctcaggatgttgaattgaat
gctgaagactttatagttgacgttattaatatggactatggaatgaaagaacagaaccct
atcgataaagttcgcttctattgcaagtctgacccgagccaggcagtcaagatttcgaaa
gaacaggtttccaggcttctgccagagacatttgcagagcagctgatccgtgtttattgc
aagaaaaaggatgagaagagtttagatgctgcaacaaagtgttttattcagtggtgtatg
aacaaggattttacaaaaccacaggatggtgatgtggtcgcccctgaactaactccaatg
aaagcaagctggaacgaccctgacgaggatgaactgcaaagtccaaatgaccgcagggaa
gcttcaaaatccagaaccagactctctttcaataactga
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