Chelonoidis abingdonii (Abingdon island giant tortoise): 116831989
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Entry
116831989 CDS
T07367
Symbol
THOC1
Name
(RefSeq) THO complex subunit 1 isoform X1
KO
K12878
THO complex subunit 1
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Pathway
cabi03013
Nucleocytoplasmic transport
cabi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116831989 (THOC1)
09122 Translation
03013 Nucleocytoplasmic transport
116831989 (THOC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cabi03019
]
116831989 (THOC1)
03041 Spliceosome [BR:
cabi03041
]
116831989 (THOC1)
Messenger RNA biogenesis [BR:
cabi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
116831989 (THOC1)
Spliceosome [BR:
cabi03041
]
Complex C
Other components
EJC/TREX
116831989 (THOC1)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
116831989 (THOC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
efThoc1
Death
bDLD3
Motif
Other DBs
NCBI-GeneID:
116831989
NCBI-ProteinID:
XP_032648262
Ensembl:
ENSCABG00000019246
LinkDB
All DBs
Position
Unknown
AA seq
656 aa
AA seq
DB search
MSPPLFSLPEARLRFTNSTRDALTNKTIKPLLNAFNQIPGSENEKKCTLDQSFRVVLEEE
IINQASCENVLAIISLAINAVTDGICTASTPFVLLGDVLDCLPLDQCDKIFTFVEKNVTT
WKSNTFYSAGKNYLLRMCNDLLRRLSKSQNTVFCGRIQLFLARLFPLSEKSGLNLQSQFN
LENVTVFNTNEQESTLGQKHIEERDEGMEVEEGEMGDDEAPTSCSIPIDYNLYRKFWSLQ
DYFRNPVQCYEKISWKTFLKYSEEVLAVFKSYKLDDTQASRKKLEELKTGGEHVYFAKFL
TSEKLMDLQLSDSNFRRHILLQYLILFQYLKGQVKFKSSNYILTDEQSLWIEDTTKLVYQ
LLSENPPDGERFSKMVEHILNTEENWNTWKNEGCPSFVKERPSDCKPTRFVRKRPAPEDF
LGKGPNKKILMGNEELTRLWNLCPDNMEACKSETREYMPTLEEFFEEAIEQADPENMVEN
EYKAVNNSNYGWRALRLLARRSPHFFQPTNQQFKSLPEYLENMVIKLAKELPPPSEEIKT
GEDEDEEDNDALLKENNESPDVQQDKPVTGRQIESFANKLGEQWKTLAPYLEMKDADIRQ
IESDSEDVKMRAKQLLVAWQDQEGIHATPENLITAMNKAGLSDLAESLSNDTENSS
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atgtcgccaccgctcttcagccttcccgaggcgcggctccgcttcacgaattctactcgt
gatgctttgaccaacaaaactatcaaacccttactgaatgcatttaaccagattcctgga
agtgagaatgaaaagaaatgcaccctggatcaatctttcagagttgttctagaagaggaa
attataaatcaagcttcatgtgaaaatgtcttggctattatttctcttgctattaatgca
gtgacagatggtatctgcacagcatcaaccccttttgtgcttctgggagatgttctggat
tgcctaccattggatcagtgtgacaaaatttttacatttgttgaaaaaaatgtcactaca
tggaaatcaaatacattttattcggctgggaagaattacttgctgagaatgtgcaatgat
ctcctaagaagattatctaaatcacagaacacagtcttctgtggaagaattcagctattc
ctggctagattatttcctctttcagagaagtcaggacttaatttgcaaagtcagtttaat
ctggaaaatgtcacagttttcaatactaatgaacaagagagcactctgggacagaagcat
atagaggagagagatgaaggaatggaagtagaagaaggtgaaatgggagatgatgaagct
cctacaagttgctccattccaatagattacaacctgtatagaaaattctggtcgcttcag
gattactttaggaatcctgtgcagtgctatgagaagatctcgtggaagacatttcttaag
tattcggaagaagttttggctgtttttaaaagctacaaattggatgacacacaggcctcc
agaaaaaagttggaagagctaaaaacagggggagaacatgtctactttgcaaagttctta
actagtgaaaagctaatggatttacagctgagtgacagtaacttccgccgtcacatcttg
ctgcagtatctaatactatttcagtatctaaagggacaggtcaaatttaaaagttcaaac
tacattctaactgatgaacagtccctctggattgaagatactacaaaattggtttaccag
cttctttcagaaaaccccccagatggtgaaagattctcaaaaatggtagagcatatatta
aacactgaagaaaactggaacacctggaaaaatgaaggctgtccaagttttgtgaaagaa
agaccatcagattgcaagccaacaagatttgtgagaaagaggccagctccagaggatttc
ctagggaaaggtccaaacaaaaaaattctcatggggaatgaggagctaactcggctttgg
aatttatgtccggacaacatggaagcttgtaaatctgagactagggaatacatgccgaca
ctggaggagttctttgaagaagctattgagcaggcagatcctgaaaacatggttgaaaat
gaatataaggctgtgaataattctaattatggctggagagcattaagattactagcacgc
agaagtccccacttcttccagccaaccaatcaacaatttaagagtttaccagaatactta
gaaaacatggtaatcaaattagccaaggagttgcctcctccttctgaagaaataaaaaca
ggagaggatgaagatgaggaagataatgatgctttattaaaggaaaacaatgaaagtcca
gatgtacaacaagacaaacccgtgacagggagacaaattgaatcatttgctaacaagctt
ggagaacaatggaagactctggccccctacttggaaatgaaggacgctgatataagacag
attgagtccgatagtgaagatgtgaagatgagagcaaagcagctgctggttgcctggcag
gatcaagaggggatacatgcaacacctgagaatctgattactgcaatgaacaaagctgga
ttaagtgaccttgcagaaagtctgtctaatgacactgaaaacagtagttaa
DBGET
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