Chelonoidis abingdonii (Abingdon island giant tortoise): 116832314
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Entry
116832314 CDS
T07367
Symbol
CNOT3
Name
(RefSeq) LOW QUALITY PROTEIN: CCR4-NOT transcription complex subunit 3
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Pathway
cabi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
116832314 (CNOT3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cabi03019
]
116832314 (CNOT3)
Messenger RNA biogenesis [BR:
cabi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
116832314 (CNOT3)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
116832314 (CNOT3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
DUF4407
Motif
Other DBs
NCBI-GeneID:
116832314
NCBI-ProteinID:
XP_032648892
Ensembl:
ENSCABG00000011396
LinkDB
All DBs
Position
Unknown
AA seq
718 aa
AA seq
DB search
MADKRKLQGEIDRCLKKVSEGVEQFEDIWQKLHNAANANQKEKYEADLKKEIKKLQRLRD
QIKTWVASNEIKDKRQLIDNRKLIETQMERFKVVERETKTKAYSKEGLGLAQKVDPAQKE
KEEVGQWLTNTIDTLNMQVDQFESEVESLSVQTRKKKGDKDKQDRIEGLKRHIEKHRYHI
RMLETILRMLDNDSIQVDSIRKIKDDVEYYVDSSQDPDFEENEFLYDDLDLEDIPQALVA
TSPPSHSHLEDEIFNQSSSTPTSTTSSSPIPPSPANCTTENSEDDKKRGRSTDSEVSQSP
AKNGSKSVHNNHPPPSPAVTPSYQLGSSSSTSSSLGNGPGSSSNGAVSNSSGGAGAKAVT
ATGHMPSTPTPYAQAVAPPPPGANASQPRPPSAQQNASKQNGATSYSSVVADSTSDSVIG
SSGPALPSQPVAHNLPSSAAKEPSGAPVPPSASSGLLVPMTVNTPSSPTPSFSEAKPSQP
LLNGPPQFSSTPEIKAPEPLSSLKSMAERAAIGASIEDPVPSLHLSERDILISSTTSQPA
SSQPPIQLSEVNIPLSLGVCPLGPVPLTKEQLYQQAMEEAAWHHMPHPSDSERIRQYLPR
NPCPTPPYHHQMPPLHSDTVEFYQRLSTETLFFIFYYLEGTKAQYLAAKALKKQSWRFHT
KYMMWFQRHEEPKTITDEFEQGHEYITTSTNEKWGQAERRKDGSPFEYHQLLEDRDLQ
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atggctgacaagaggaaattgcaaggtgagatcgatcggtgtctgaagaaggtctccgag
ggggtggagcagtttgaggatatttggcagaagctccacaatgcagccaacgccaaccag
aaggagaagtatgaagccgacctgaagaaggagatcaagaagctccagaggctgagggac
cagatcaaaacgtgggtggcttcaaatgagatcaaagacaagaggcagctgatagacaac
cggaaactcattgagacgcaaatggagcggttcaaggtggtggagcgggagaccaagacc
aaagcctactccaaggaggggctgggcctggcgcagaaagtcgaccctgcccagaaggag
aaggaagaggttggccagtggttaacgaacaccatcgacacgctgaacatgcaggtggat
cagtttgagagcgaggtggagtcactgtctgtgcagacacgcaagaagaagggggacaag
gataagcaggaccggatcgaggggctgaagcggcacatcgaaaagcaccggtaccacatc
cgcatgctggagaccatcctgcgcatgctggacaacgactccatccaggtggactcgatc
cgcaagatcaaggacgacgtggagtattacgtggactcctcacaggaccctgacttcgag
gagaacgagtttctctacgacgacctcgacctagaagacattccgcaggctctggtagcc
acctccccgcccagccacagccacttggaggacgagatcttcaaccagtccagcagcact
cccacctccaccacctccagctcgcccattccgcccagccctgccaactgcacgacggag
aattcggaagatgacaagaagagggggcggtcgacagacagcgaggtcagtcagtctccc
gcaaagaacggttcaaaaagtgtccacaacaaccatcccccaccctcgccggccgtcacc
cccagctaccagctgggcagcagctccagcacctcgtcctcgctgggcaacggcccgggc
tccagcagcaacggagccgtgtccaacagcagcgggggcgccggggccaaggccgtcaca
gccaccggtcacatgcccagcacccccaccccctacgcccaggccgtcgcgcccccgccc
cccggtgccaacgcctcgcagccccggcctcccagtgcccagcagaacgccagcaagcag
aacggagccaccagttacagctccgtggtggctgacagcacatctgactctgttattggc
agcagcggcccagcgctccccagccagccggtggcccacaacctgcccagcagcgctgcg
aaagagcccagtggagcccccgtgccccccagtgccagctctggcctcctagtccccatg
acagtgaataccccgagctccccgaccccttccttctccgaggccaagccgagccagcca
ctgctcaacgggccacctcagttcagctccacgccagaaatcaaggcgcctgagcccctg
agcagcttgaaatccatggcagagcgagcagccatcggagccagtatagaggacccagtg
ccatctctccacctgtctgaaagggacattttaattagtagcacgacctcgcagccggcc
tccagccagccgcctatccagctgtcagaggtgaacatccctctctccctgggggtctgc
cccctgggaccggtgcccctcaccaaggagcagctctaccagcaggccatggaggaggca
gcctggcaccacatgcctcacccctcggactcagagaggatccggcaatacctgccccgg
aacccctgcccgacccccccttaccaccaccagatgcctccgctgcactcggacaccgtg
gagttctatcagcggctctcaacggagacgctcttcttcatcttctactatctggagggt
accaaggcgcagtacctggcggccaaagccctgaagaagcagtcgtggcgcttccacacc
aagtacatgatgtggttccagcggcacgaggagcccaagaccatcacggatgagtttgag
cagggtcacgaatacataactacttcgactaatgagaaatggggccaagcggaaagaagg
aaagacggttcacctttcgagtaccatcagctactagaagaccgcgatctgcagtga
DBGET
integrated database retrieval system
