Chelonoidis abingdonii (Abingdon island giant tortoise): 116836775
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Entry
116836775 CDS
T07367
Symbol
DDX55
Name
(RefSeq) ATP-dependent RNA helicase DDX55 isoform X1
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cabi03009
]
116836775 (DDX55)
Enzymes [BR:
cabi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
116836775 (DDX55)
Ribosome biogenesis [BR:
cabi03009
]
Eukaryotic type
Pre-60S particles
Helicases
116836775 (DDX55)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
Helicase_C_2
SBF_like
AAA_22
Motif
Other DBs
NCBI-GeneID:
116836775
NCBI-ProteinID:
XP_032656548
Ensembl:
ENSCABG00000007682
LinkDB
All DBs
Position
Unknown
AA seq
595 aa
AA seq
DB search
MERVTEGRWESLPVTLSPGVLQTLRELGFPHMTPVQSATIPLFMNNKDVAAEAVTGSGKT
LAFVIPILEILLRREEKLKKMQVGAIVITPTRELAVQIDEVLSHFTKHFPQFSQILLIGG
RNPVEDIEKFKEHGGNIIIATPGRLEDMFRRKADGLDLASCVKSLDVLVLDEADRLLDMG
FEASLNTILDFLPKQRRTGLFSATQTQEVENLVRAGLRNPVRITVKEKGVAASSTQKTPT
RLENYYMICKADEKFNQLVHFLREHKQEKHLVFFSTCACVEYYGKALESFVKNVKIMCIH
GKMKHKRNKIFTEFRKLPSGILVCTDVMARGVDIPEVNWVLQYDPPSSASAFVHRCGRTA
RIGHLGSALVFLLPMEESYVNFLSINQKCPLQEMKPLKNVVDVLPKLKTLSLADRAMFEK
GMKAFVSCVQAYAKHECNLIFRIKDLDFASFARGFALLRMPKMPELKGKCFSDFVPVSID
TDSIPFKDKNREKQRQKLLEQQRKDRQENEGKRKFIRNKAWSKQKAKKEKKKKMTTKRKR
EEGSDIEDEEMEELLNDTRLLKRLKKGKISEEEFEKRLVSSERKVKAVFDSESED
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atggagagggtgaccgaggggaggtgggagtctctgcccgtcacgctcagcccgggcgtc
ctgcagaccctgcgtgagctgggcttcccccacatgacccccgtgcagtctgcaactata
cctttgtttatgaacaataaagatgttgctgcggaagcggtaacaggcagtggcaaaaca
ttagcttttgtaattcccatattggaaattctcctcagacgggaagaaaagttaaagaaa
atgcaggttggagccatagtcatcacacccacaagagagttagctgttcagattgatgaa
gtgctatcacatttcacaaaacacttcccccagtttagccagattcttttgattggtggt
aggaatccagtggaagatattgaaaagttcaaagaacatggtgggaacatcattatagcc
acaccgggccgtctggaggatatgttcagaagaaaagcagatgggctggatttagcaagt
tgtgtgaaatcccttgatgtgctggtattggatgaagcagacagacttctagatatggga
ttcgaagcaagtttaaataccattctggactttttgcccaagcagagacgaacaggcctg
ttctcagcaactcaaactcaagaagtagagaacctggtgagagcaggtctccgaaatccc
gtccgcatcacagtgaaagagaaaggagtggcagcaagtagcactcagaaaacacccaca
cggcttgaaaattactacatgatatgcaaagcagatgaaaaatttaatcagttggtgcat
tttcttcgagaacacaagcaggaaaaacatctggtctttttcagtacctgtgcctgtgtg
gaatattatgggaaagctctggaatccttcgttaaaaatgtgaaaataatgtgcattcat
gggaaaatgaaacataaacgtaacaagatatttaccgagtttcggaaactcccaagtggc
attttagtttgcactgatgtgatggcccgtggcgtagacattccagaagtaaactgggtt
ttacagtatgatccaccgagcagtgcaagtgcctttgtacatcgctgcggtcgaacagct
cgaattggccatttaggcagtgcgcttgtgtttttgcttcccatggaagaatcttacgta
aattttctctcaataaaccaaaagtgtcccctgcaggaaatgaaaccactgaaaaatgtg
gtagatgttcttccaaaactgaagactttgtctctggctgacagagccatgtttgagaaa
gggatgaaagcatttgtatcttgtgtgcaggcctatgccaaacatgagtgcaatcttatc
ttccgaataaaagatctggactttgctagttttgctcgaggttttgccctgctgaggatg
ccaaagatgcctgaactaaaaggaaagtgtttttcagactttgttcctgtcagtattgat
acagactccattcccttcaaagataaaaacagagaaaaacaaaggcaaaagctgttagag
cagcaaagaaaggacagacaagaaaatgaaggcaaaagaaaatttataaggaataaagcc
tggtcaaagcagaaagccaaaaaggagaagaaaaagaaaatgacaacaaaaaggaaaaga
gaagagggctctgatattgaagatgaggaaatggaggagctgctgaatgacacacgactt
ttgaaaaggttaaaaaagggtaaaattagtgaggaagagtttgagaagaggctggtgagc
agtgagagaaaagtcaaagctgtgtttgactcagagtctgaagactga
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