Chelonoidis abingdonii (Abingdon island giant tortoise): 116837338
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Entry
116837338 CDS
T07367
Symbol
U2SURP
Name
(RefSeq) U2 snRNP-associated SURP motif-containing protein isoform X1
KO
K12842
U2-associated protein SR140
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Pathway
cabi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116837338 (U2SURP)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cabi03041
]
116837338 (U2SURP)
Spliceosome [BR:
cabi03041
]
Complex A
U2 snRNP components
U2 related factors
116837338 (U2SURP)
Complex B
116837338 (U2SURP)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Surp
RRM_1
cwf21
CID
CTK3
SET_assoc
RRM_7
Motif
Other DBs
NCBI-GeneID:
116837338
NCBI-ProteinID:
XP_032657555
Ensembl:
ENSCABG00000017539
LinkDB
All DBs
Position
Unknown
AA seq
990 aa
AA seq
DB search
MADKTPGGSQKTSAKVRLPDTVETTGSADSHPLLENKLKAFSIGKMSAAKRTLSKKEQEE
LKKKVMEDEKAAAEIYEEFLAAFEGSDGNKVKTFVRGGIVNASKDEHETDEKRGKIYKPS
ARFADQKNQPNQPSSNERPPSLLMIETKKPPLKKGEKEKKKSNLELFKEELKQIQEERDE
RHKTKGRLSRFEPPQSDSDGQRRSMDAPSRRNRSSGVLDDYAPGSHDVGDPSTTNLYLGN
INPQMNEEMLCQEFGRFGPLASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNG
KMIMSFEMKLGWGKAVPIPPHPIYIPPSMMEHTLPPPPSGLPFNAQPRERLKNPNAPMLP
PPKNKEDFEKTLSQAIVKVVIPTERNLLALIHRMIEFVVREGPMFEAMIMNREINNPMFR
FLFENQTPAHVYYRWKLYSILQGDAPTKWRTEDFRMFKNGSFWRPPPLNPYLHGMSEEQE
TEAFVEEPNKKGALKEEQRDKLEEILRGLTPRKNDIGDAMVFCLNNAEAAEEIVDCVTES
LSILKTPLPKKIARLYLVSDVLYNSSAKVANASYYRKFFETKLCQIFSDLNATYRTIQGH
LQSENFKQRVMTCFRAWEDWAIYPEPFLIKLQNIFLGLVNIIEEKEIEEVPDDLDGAPIE
EELDGAPLEDVDGIPIDAAPIDDLDGIPIKSLDDDLDGIPLDTSEESKKNEPIFKVAPSK
WEAVDEAELEAQAVTTSKWELFDQHEESEEEANQNQEEESEDEEDTQSSKSEEQHMYSNP
IKEEMPESKSSIKYSEMSEEKRAKLREIELKVMKFQDELESGKRPKKPGQSFQEQIEHYR
DKLLQREKEKELERERERDKKDKEKSESRSKDKKEKEECTPTRKERKRRHSTSPSPSRSS
GSRRAKSPSPKSERSERSERSHKETSRSRSSHKDSPRDVSKKAKRSPSGSRTPKRSRRSR
SRSPKKSGKKSRSQSRSPHRSHKKSKKSKH
NT seq
2973 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaaaacgccaggcgggtcgcagaaaaccagtgcgaaggtcagactaccagat
acggtagaaacgactggatctgccgatagtcaccctcttttggaaaacaaacttaaagca
ttcagtattggcaaaatgagtgctgccaagagaactttaagtaagaaggaacaagaggag
ttaaaaaagaaggtaatggaggatgagaaggcagctgcagaaatttatgaagaattcctt
gctgcctttgaaggaagtgacggtaataaagtgaaaacattcgtaagaggaggaattgtt
aatgcgtctaaagatgaacatgaaacagatgaaaaacgaggtaaaatctacaaaccttca
gcgcgatttgcagatcaaaaaaatcagccaaatcaaccatcctctaatgagaggcctcca
tcccttctaatgatagaaaccaaaaagcctcctttgaagaagggggaaaaagaaaagaaa
aagagcaatttagaactcttcaaagaagaactaaaacaaattcaagaggagcgtgatgaa
aggcataaaacaaaaggtagattaagtcgttttgagccaccccagtcagattcagatggc
cagcgccgttccatggatgctccttcaagaagaaacagatcttctggtgtactggatgat
tacgcaccaggttcacatgatgttggagatccaagcacaacgaatttgtaccttggaaac
attaatcctcagatgaatgaagagatgttatgtcaagaatttgggcgttttggaccatta
gctagtgttaaaattatgtggccaagaaccgatgaggaaagagcaagagagaggaactgt
ggttttgttgcctttatgaacaggagagatgctgaacgagcattaaagaatttaaatggc
aagatgattatgtcctttgaaatgaagctaggttggggcaaagctgtaccgattccacca
cacccaatatacattccaccttccatgatggaacacaccctcccaccacctccatcagga
ctgccttttaacgctcagcctagagagagattgaagaaccccaatgctccaatgttacca
ccaccaaaaaacaaggaggattttgagaagactctgtcgcaagccatagtcaaagtggtt
atcccaacagaaaggaatttgctcgcattgatacatcgaatgatagagtttgtagtacgt
gaagggcctatgtttgaagccatgatcatgaaccgagaaatcaacaatccaatgttcagg
tttttgtttgaaaaccagactccagcccatgtatattacagatggaagctttattcaatt
ttacagggagacgctccaaccaagtggaggacagaagactttcgtatgttcaaaaatgga
tcattttggaggccaccaccattaaatccatatctgcatgggatgtcagaagagcaagaa
acggaagcatttgtagaggaacctaacaagaagggtgcacttaaggaggagcagagagac
aaattagaggaaatcctgcgtggattaacgcctcgtaagaacgatattggcgatgcaatg
gttttctgtcttaataatgccgaagctgctgaagaaattgtagactgcgttacggagtca
ttgtccattctgaagactcctcttcctaaaaagattgcaagattatatttggtgtcggat
gtgttatacaactcttcagctaaagttgccaatgcttcatattatagaaaattttttgaa
acaaaattatgtcagatattttctgatctcaatgctacctaccgtaccatacaaggccat
ttacagtcggaaaatttcaagcaacgggtaatgacatgcttcagagcatgggaagactgg
gcgatttatccagaaccctttttgatcaaactgcagaatattttcttgggacttgtaaat
attatagaagaaaaagaaatagaggaagtaccagatgatcttgatggagctcccattgag
gaagagcttgatggtgcaccactggaagatgttgatggaattcctattgatgctgctcca
atagatgatcttgatggaatccctattaaatcgcttgatgatgatcttgacggtatacct
ttggatacttctgaagagtctaaaaagaatgagcccatattcaaagttgccccttcaaaa
tgggaggcagtggatgaagcagaattggaagctcaggctgttacaacttctaaatgggag
ttgtttgaccagcatgaagaatcagaagaggaggcaaatcaaaatcaggaagaagaaagc
gaagatgaggaggatactcagagctctaaatcagaagagcagcatatgtactccaatccc
atcaaagaagaaatgcctgaatccaagtcatcaatcaagtactctgaaatgagtgaagaa
aagcgcgccaaactcagagaaattgagcttaaggtgatgaaatttcaagatgagttggag
tctggaaaaagacccaagaaaccaggccagagttttcaggaacagattgaacactacaga
gacaaacttcttcagagggaaaaagaaaaggagctggaaagagaacgagagagagacaag
aaagacaaggaaaaatctgaatccagatccaaagacaagaaggaaaaagaagaatgtaca
ccaacaagaaaagagaggaaaagacgacacagtacatctcccagtccgtctcgcagcagt
ggcagtagacgagcaaaatccccatcaccaaaatcggagcgctcagagcgatctgaaaga
tcccacaaagagacctcacgttcaaggtcatctcacaaagattctcctagagatgtcagt
aaaaaagccaaaaggtcaccatctggctcaaggacacccaaaagatcaagaaggtcacga
tccaggtcccctaaaaagtcagggaaaaaatccaggtcgcagtcccgttctccacacaga
tctcacaagaagtcaaagaaaagcaaacactga
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