Chelonoidis abingdonii (Abingdon island giant tortoise): 116837456
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Entry
116837456 CDS
T07367
Symbol
SMARCA2
Name
(RefSeq) probable global transcription activator SNF2L2 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Pathway
cabi03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
116837456 (SMARCA2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cabi03021
]
116837456 (SMARCA2)
03036 Chromosome and associated proteins [BR:
cabi03036
]
116837456 (SMARCA2)
Transcription machinery [BR:
cabi03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
116837456 (SMARCA2)
Chromosome and associated proteins [BR:
cabi03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
116837456 (SMARCA2)
Chromatin remodeling factors
BAF complex
116837456 (SMARCA2)
PBAF complex
116837456 (SMARCA2)
GBAF(ncBAF) complex
116837456 (SMARCA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
116837456
NCBI-ProteinID:
XP_032657720
Ensembl:
ENSCABG00000019732
LinkDB
All DBs
Position
Unknown
AA seq
1572 aa
AA seq
DB search
MSTPTDPGAMPHPGPSPGPGPSPGPILGPSPGPGPSPGSVHSMMGPSPGPPSVPHSMSSM
GPTDYPQEGMHQMHKSIDGLHEKGMVEDMHCSSMKSASMRPPHPGMGPPQSPMDQHSQGY
MSPHPSPLGAPEHVSSPISGGGPTPPHMPPSQPGPMIPGDPQVMSQPNRGPSPFSPVQLH
QLRAQILAYKMLARGQPLPENLQLAVQGKRTLPGIQQQQAPANYSRLPVAGIGVHSIPGP
PAGPGPASGVPGHAAAMTPKSWAEGQGPDMNVASTPQKLAVPPPSGRPSPAPPAAQPSAA
MPGPSVPQPTPGQPSPIVQLQQKQNRISPIQKPQGLDPVEILQEREYRLQARIAHRIQEL
ENLPGSLPPDLRTKATVELKALRLLNFQRQLRQEVVACMRRDTTLETALNSKAYKRSKRQ
TLREARMTEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQKLSKAVA
TWHANTEREQKKETERIEKERMRRLMAEDEEGYRKLIDQKKDRRLAYLLQQTDEYVANLT
NLVWEHKQAQAAKEKKKRRRRKKKAEENAEGMGSDLGPDGEPIDESSQMSDLPVKVTHTE
TGKVLLGPEAPKASQLDAWLEMNPGYEVAPRSDSEEESDSEYEEEDDDEESSRQEVDEKI
LLDPNSEEVSEKDAKQIIETAKQDVDDEYSMQYSARGSQSYYTVAHAIAERVEKQSALLI
NGSLKHYQIQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIV
PLSTLSNWTYEFDKWAPSVVKISYKGTPAMRRSLVPQLRSGKFNVLLTTYEYIIKDKHIL
AKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFLLP
TIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPE
KVEYVIKCDMSALQKILYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPY
MFQHIEESFAEHLGYSSGVINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMT
IMEDYFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADT
VIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQ
AGMFDQKSSSHERRAFLQAILEHEEENEEEDEVPDDETLNQMIARREEEFDLFMRMDMDR
RREDARNPKRKPRLMEEDDLPSWIIKDDAEVERLTCEEEEEKIFGRGSRQRRDVDYSDAL
TEKQWLRAIEDGNLEEMEEEVRLKKRKRRRNVDKDSGKEDGEKAKKRRGRPPAEKLSPNP
PKLTKQMNAIIDTVINYKDSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRN
HKYRSLGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEDESEDESND
DEEDDEEDESESESKSVKVKIKLNKKDEKSRDKGKGKKRQSRVKAKPVVSDDDSDEDQDE
NDQSEASGSDDE
NT seq
4719 nt
NT seq
+upstream
nt +downstream
nt
atgtccacgccaacagatcctggtgcaatgcctcatcctggcccttccccggggccaggc
ccatcacctggaccaattctaggacctagcccaggaccaggaccctctccaggttcagta
cacagcatgatgggaccaagtcctggaccccctagtgttccacattcaatgtccagtatg
gggcccactgattatccacaggaaggcatgcaccaaatgcacaagtccattgatggcttg
catgaaaaaggaatggttgaagacatgcattgtagctccatgaagagtgcaagtatgaga
ccgcctcaccctggaatgggcccaccacagagtccaatggatcagcatagccaaggttat
atgtctcctcacccatctcctttgggagcaccagaacatgtgtccagcccaatatctgga
gggggcccaactccaccccacatgccaccaagtcagccaggacccatgataccaggagat
ccacaggtcatgagccagcccaacaggggtccttcaccttttagccctgtccagctgcac
cagctccgggctcagattctagcttacaaaatgttagctagaggccagcctttacctgaa
aacctgcaacttgctgttcaagggaagaggacgttgcctgggattcaacagcaacaggct
cctgctaactacagcagactacctgttgcaggtattggggtgcattcaattcctggtccc
ccagctgggccaggacctgcttcaggagtgccaggacatgcagccgccatgacccctaaa
tcttgggcagaaggtcaaggcccagatatgaatgttgccagtacaccacaaaagcttgct
gtaccacctcctagtggaaggccttcacctgcccctcctgctgctcagccttctgcagcc
atgcctggtccttctgtaccacagccaacacctggacagccttcacctatcgtccagctg
cagcaaaaacagaaccgtatcagccccatccagaagccacaaggattggatcctgttgaa
atactccaggagcgtgaatacagacttcaggctcgaattgctcacagaatccaggaactg
gagaatttacctggctctctgcctcctgatctgcgaaccaaagctacagtcgagctgaag
gcacttaggttactgaattttcagcgccagctaagacaagaagtagtggcctgcatgcgc
cgtgacacaacactggagacagcactgaactccaaagcctacaagcgcagcaagcgccag
actctgagggaagcccgcatgacagaaaagcttgagaaacagcagaaaatcgaacaggag
agaaaacgtagacagaagcatcaggaatatctgaacagcatattgcagcatgctaaagat
tttaaagaataccaccgatcagtggctgggaaaattcagaagctttctaaagctgtggca
acttggcatgccaatactgagcgtgagcagaagaaggaaactgagcgaattgagaaagaa
agaatgagaagactgatggccgaagatgaagaaggctaccgtaagctgattgaccagaag
aaggacagacgtctggcatatctgctgcagcagacagatgagtatgtggccaacctgact
aatctggtttgggagcacaagcaagcacaagctgccaaagaaaagaaaaagaggaggaga
agaaagaagaaggcagaagagaatgcagagggaatgggatctgatcttggtcctgatgga
gagcccattgatgagagcagtcaaatgagtgaccttccagtcaaagtgactcacacggaa
acaggcaaagttcttcttggaccagaagctccaaaagcaagtcagctggatgcttggtta
gaaatgaatcctggctatgaagtagctcctaggtctgacagtgaggaggagagtgactct
gaatatgaggaagaggatgatgatgaggaatcaagtagacaagaagtggatgagaaaata
ctcctggatcctaacagtgaagaagtttctgagaaggatgctaagcagatcattgagaca
gccaaacaagatgtagatgatgaatacagtatgcaatatagtgctagagggtctcagtcc
tactatacagtcgctcatgcaatcgctgaaagggtggagaaacagtctgctcttcttatt
aatggatcactaaaacattatcagatccagggcctggaatggatggtttcactttataat
aacaatttgaatggaattttagctgatgaaatggggctaggaaagaccatacagactatt
gcactcattacttatctgatggagcacaaaagactcaatggcccctatctcatcattgtt
cccctctcgactttatccaactggacatatgagtttgacaaatgggctccttctgtggtg
aaaatttcttacaaggggacacctgccatgcgtcgttcacttgttcctcagcttcgaagt
ggaaaatttaatgttcttttaactacttatgaatacataataaaggataaacacattctt
gctaagattcgatggaagtacatgatagtagatgaaggccatcgaatgaagaaccatcac
tgcaagctgactcaggtcttgaacacccactacgtggctcctcgacggattctgttgact
gggacaccactgcagaacaagttgcctgaactttgggctctcctcaacttcctcctcccc
accattttcaagagctgcagcacctttgaacaatggtttaatgctccatttgccatgact
ggagaaagggtggacttaaacgaggaagagactattctgatcatcagacgtctccacaaa
gtgttacgacccttcttgctgaggagactgaagaaagaggttgaatctcaactgccagaa
aaggttgaatatgtgatcaaatgcgacatgtcagctcttcagaagattctctaccgccat
atgcaagcgaagggaatcctcctcacagatggctctgagaaagacaagaagggaaaaggt
ggggcgaaaactcttatgaacactatcatgcaattgagaaagatatgcaatcacccatat
atgtttcagcatattgaggagtcgtttgctgaacacttgggctattcaagtggtgttatc
aatggagccgagctttatcgggcctcagggaagtttgaactgcttgatcgcattctacca
aagttgcgagccactaatcaccgtgtgcttctcttctgtcaaatgacatccctcatgacc
attatggaggactattttgcttttcgaaatttcctttaccttcgccttgacggtacaaca
aaatcagaggatcgggctgctctgctgaagaagttcaatgagcctgggtcacagtacttt
atcttcttattgagcacaagagcgggaggcctgggcctgaatcttcaagctgctgacact
gtcattatctttgacagtgattggaatcctcaccaggatttgcaggcacaagacagagct
caccgaataggtcagcagaatgaggttcgggttctgaggctgtgcactgttaacagtgtg
gaggagaagatacttgctgctgccaagtataaactgaatgtggaccagaaagttattcag
gccggcatgttcgatcaaaaatcttcaagtcatgaacggagagcttttctacaggctata
ttggagcatgaggaagaaaatgaggaagaagatgaagttcctgatgacgagactctgaat
cagatgattgcgcgacgtgaagaggaatttgatctcttcatgcgtatggacatggatcgt
cgcagagaggatgcccgaaatcccaagcgcaagcctcgtttgatggaggaggatgatctg
ccatcctggattattaaagacgatgctgaagtagaaaggcttacctgtgaggaagaagaa
gaaaaaatatttgggagggggtcccgtcagcgcagagatgtggactacagtgatgctctc
acagagaaacagtggctcagggcaatcgaagacggcaacttggaagaaatggaagaggaa
gtccggcttaaaaaacgaaagagacgaagaaatgtggataaggattctgggaaagaagat
ggagaaaaggcaaagaagagaagaggcagacctcctgcagaaaaattgtcacccaaccca
cctaaactgacaaaacaaatgaacgccattatcgatactgtgataaactacaaggacagt
tcaggacggcagctaagtgaagtcttcattcagctcccgtctaggaaggaattaccagaa
tattatgagttaattaggaaaccagtggacttcaaaaaaataaaggaaagaattcgtaac
cataagtatcgaagccttggtgacttggagaaagatgtcatgttgctgtgtcacaatgct
cagacattcaacttggagggatcgcagatttatgaggattctattgttctccagtcagtc
ttcaagagtgcccgacagaagattgccaaagaggatgagagcgaggatgaaagcaacgat
gatgaggaagatgatgaggaagatgagtcagagtcagaatcaaaatctgtgaaagtgaaa
atcaagctgaataagaaggatgagaaaagccgggacaaagggaaaggcaagaagcgacag
agccgagtaaaagccaagcctgtcgtgagcgatgatgacagtgatgaggatcaagatgaa
aatgaccagtcagaagcaagtggaagtgatgatgagtga
DBGET
integrated database retrieval system
