Chelonoidis abingdonii (Abingdon island giant tortoise): 116838872
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Entry
116838872 CDS
T07367
Name
(RefSeq) LOW QUALITY PROTEIN: sodium channel protein type 5 subunit alpha-like
KO
K04842
voltage-gated sodium channel type X alpha
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cabi04040
]
116838872
Ion channels [BR:
cabi04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
116838872
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
PKD_channel
GPHH
IQ
Motif
Other DBs
NCBI-GeneID:
116838872
NCBI-ProteinID:
XP_032660303
Ensembl:
ENSCABG00000015883
LinkDB
All DBs
Position
Unknown
AA seq
1904 aa
AA seq
DB search
MADFSLPCSNHFRQFTRESLAAIEKRIAANKKYKDHQPKEKPRPQLDLQVFQKLPTLYGN
PPQELVGKPLEDLDPYYNDHKTFMVLNKRKTIFRFTATRALCILSPFHSIRRAAIKISVH
SLFTMFIMCTILTNCVFMAIFETRRKSKSPKFRDWRKYVEYTFTAIYTFEVLIKILARGF
WLNEFSFLRDPWNWLDFSVIAMAYAGEFTDLGNVLALRTFRVLRALKTISILPGLKVIVG
ALIQSVKKLTDVMILTVFCLSVFALIGLQLFKGNLRHKCVRNFNSTNGTIYLDDKKWGSF
DEFINDTENVLKKNGTKDALLCGNSSDAGSCPRNYICLQVGENPDYGYTSFDTFGWAFLS
LFRLMTHDYWERLYQQTLRASGKIYMLFFMLVIFVGSFYLINLILAVVTMAYEEQNKATI
AETEAKERRFQEAMKLLKKEQEALTAKGNDTKSLCSFEMLPLPSKEVKDRSNRRKKNKSL
EIEDYGEDQKVPKSQSSSHQQNLTPVCDEVSKKHLLHHLSVDYFNEPLQSQRATGAVNTI
TCVLEESQQKCPPCLKDFALKYLIWDCCPLWLRIKKKVTILVMDPFTDLAITLCIVMNTI
FMALEHYKMTRNLKFMLNVGNKVFTGIFTAEVILKIIALDPYYYFQQRWNIFDSIIVTVS
LIDLSLHTKAKGRKEHGNLLVLRSLKLLRIFKLAKSWTTLNILIKIIGNSVSAMGNLTLV
LAIIVFIFAVVGTQLFGKSYKEHCSKISDDCKPRWHMMDFFHSFLIIFRILCGEWLETMW
DCMVVAEEPLCLIVFLLAMVIGNLVVLNLFIALLLNSFSADNLQAPEDDAEMNNLQIAFA
RIHRGLLLVKHATWDYCCGKLRQPKKATKKKMKLAAENTCVETGKEGKNCKENHSDNVTD
KNGEKCSVSILEDFITNPNMFICIPIAEAESDSEEYEEDDNNLSTFTKMEYSKQQEKHLR
XRGKQCKRSGAWCKAGVGSEISSENLSEFNINKQWKAGSSSLIQKEHLDDISCSEGSTVD
LTNPEELLKQIPELAEYLKKPDNCFPEGCIRHSPCCSVNSTKFPGKTWWNLRKTCYKIVE
HNWFESFIIFMILLSSGSLAFEDIHLGKRKNIKMMLEFFDKIFTYIFVFEMFLKWLAYGF
RKYFTNAWCWLDFLIVDVSLASLIANSLGYAEIGPMKSLKTLRALRPLRALSQFEGMRVR
VNKAISEGSLCEHQVVVNALVGAIPSIMNVVLVCLIFWLVFSIMGVNLFAGKFGKCVNLT
EEKSEINNSIKNKLDCTTYNDTQKIYWINVVVNFDNVGSGYLALLQVATFKGWMDIMYAA
VDSRGKEKQPKKDNNPYMYLYFVVFIIFGSFFTLNLFVGVIIDNFNQQKKKISGQDIFMT
EEQRKYYNAMKKLGSKKPQKPIPRPLNKYQGFFFDIVTSEAFDIIIMILICLNMITMMVE
TDNQSIRKTDILNKINMFFVAIFTVECIMKLLALRHYYFTNGWNIFDLSVVIMSIVGTLV
SHIVNAFENYFSPTLFRVIRLAQIGRILRLIRAAKGIRTLLFALMMSLPALFNIGLLLFL
VMFIYAIFGMANFAYVQWEGGIDDMFNFQTFPNSMLCLFQITTSAGWDGLLSPILNTGPP
FCDPNIKGVVGECGKPAAGIIFFVSYIIISFLIVVNMYIAVILENFSVATEESTDPVGED
DFDMFYKIWEKFDPEATQFIEYSALSDFADALAEPLRIAKPNKIELLAMDIPLASGDRIH
CLDILFAFTKRVLGESGEMDKLKEQTEEKFMAANPSRFFHEPITSTLRHKEEEVSAIIIQ
RAYRSHLIQRSMKQASLLYHRTCDGDILEDASQKEGLIAFMMNENYGRNLDKSETVSSTS
FPPSYNSVTEDTNDNLQVKTVDSSKCDVRIGCQLSPDKDKECIV
NT seq
5715 nt
NT seq
+upstream
nt +downstream
nt
atggctgacttttcactaccgtgttctaaccatttccgccagttcacgcgtgaatctttg
gctgctattgagaagcgaattgctgccaacaagaaatacaaagaccaccaacctaaagag
aaacctcgtccccaacttgacttgcaggttttccaaaagctgcctactctctatgggaat
cctcctcaggagcttgttgggaaaccactggaggatcttgacccttattacaatgatcac
aagacatttatggtattgaacaaaaggaaaacaatcttccgatttactgccacacgtgcc
ttgtgtatacttagccctttccattcaatcagaagagcagcaattaaaatttcagtacat
tcattgttcactatgtttattatgtgcactattttaaccaattgtgtcttcatggctata
tttgagactcgtagaaagtctaagtcacctaaatttcgtgactggagaaagtatgttgaa
tacacgtttacagccatttacacttttgaagtattgataaaaatattggcaagaggattc
tggctgaatgaattcagtttccttcgagatccatggaattggttggatttcagtgtcatt
gctatggcatatgcaggggagtttactgatctaggcaatgttttggcccttcgtacattc
agggttctgagagctttaaaaacgatttcaatactcccaggactgaaggtcatcgtaggt
gcactgatccagtctgttaagaaacttactgatgtgatgatcctgaccgttttctgcttg
agtgtctttgccctcataggcctccagctctttaaaggcaatttgagacataagtgtgtc
aggaattttaactccaccaatggaactatttatttggatgacaaaaaatggggctccttt
gatgagtttattaatgatacagaaaatgttttgaagaagaatggcaccaaggatgcgtta
ttgtgtggcaacagctcagatgctggctcctgtccacgtaactatatatgtctccaagtc
ggggaaaatcctgattatggctacacaagttttgatacatttggctgggcctttctttcc
ttgttccgcctgatgacacatgattactgggagcgtctctatcaacagactctcagagct
tctgggaagatctacatgctcttttttatgctggtcatctttgtgggctcattttatctg
atcaacttgatcctggctgtagtgactatggcatacgaagagcagaacaaagctactatt
gctgaaactgaggcaaaggaaaggaggtttcaggaagccatgaaactgttgaaaaaagag
caagaggcattgactgctaaaggaaatgatacgaagtcactttgctcctttgaaatgtta
cctttaccctccaaagaagtcaaagatagaagcaacaggagaaagaaaaataagtcctta
gagatagaagattatggggaagatcaaaaagttcccaaatcacagtccagtagccatcaa
caaaacctgacccctgtatgtgatgaagtgagcaagaagcatttgctccatcatctgtca
gtggactattttaatgagccactacaaagtcaaagggcaactggggcagtcaataccatt
acctgtgtcctggaggaatcacaacagaaatgccctccctgcttgaaggactttgcccta
aaatatcttatttgggactgttgtccactgtggttgagaatcaagaaaaaggtgacaatt
ttagtaatggatccatttactgacctcgctatcactctttgcattgtgatgaatactatc
ttcatggcactagagcactataaaatgacaagaaatttaaaattcatgcttaacgtaggc
aacaaggtctttactggaatttttactgcagaagtgatcttgaaaatcattgctctagat
ccctattactattttcagcaacgctggaatatttttgacagcataattgtcaccgtaagc
ttaattgacttgagtttacacaccaaagctaaaggaagaaaagaacatggaaacctgtta
gttttgcgttccctcaaactgctaaggatcttcaaactggcaaagtcctggacaactttg
aatatacttattaaaatcattggtaactcagtgagtgctatgggtaaccttaccctggtt
ctggcaatcatagtctttatatttgctgtagtaggaacgcaactttttggtaaaagctac
aaagaacattgctctaaaataagtgacgattgcaagccacgttggcatatgatggatttt
ttccactcattccttattatattccgaattctgtgtggagaatggcttgaaaccatgtgg
gattgtatggtggtggctgaggaaccattatgccttattgtcttcttgctggccatggtg
ataggaaacctagtggttctcaacctgttcattgcactactgctgaactccttcagcgct
gacaacctccaagcacctgaagatgatgcagagatgaacaaccttcagattgcatttgct
cggatccacaggggacttcttctggtgaaacatgcaacatgggattactgttgtggaaag
ctccggcaaccaaagaaagcaaccaaaaagaaaatgaaattggctgctgagaacacatgt
gtggagactgggaaagaagggaagaattgtaaagaaaatcacagtgacaatgtgactgac
aagaatggagagaaatgctctgttagcattcttgaagattttatcaccaaccccaacatg
tttatctgcatccctattgctgaagcagaatctgatagtgaggagtatgaagaagatgat
aataatttaagtacattcacaaaaatggagtacagtaaacagcaggaaaaacatcttaga
nncagagggaaacaatgtaaaagatcaggagcttggtgtaaagcaggggttggatctgag
atttcctctgaaaacttaagtgagtttaacataaacaaacaatggaaggctggctcatca
tctctaatacaaaaagagcacctggatgacatcagctgttctgaaggcagcacagtggat
ctgacaaatcctgaggagcttctaaaacagatccctgagctggctgaatacttaaagaaa
cctgataactgttttccagaaggctgtattcgacattccccttgctgttcagtgaatagc
acaaagtttccaggcaaaacttggtggaacctgaggaaaacatgctacaaaattgttgaa
cacaactggtttgaaagctttatcatattcatgattctgctaagcagtggaagcctggca
tttgaagatatacatcttggaaaaagaaaaaacattaaaatgatgttggaattttttgat
aaaatcttcacttatatctttgtcttcgaaatgtttctgaaatggctggcttatggcttc
aggaagtatttcaccaatgcctggtgttggctcgatttcctaattgtagatgtctcttta
gcaagccttatagctaactcacttggatatgccgaaataggacccatgaaatcccttaaa
actctgagagccttgagaccattaagggcattgtcacaatttgaagggatgagggtaaga
gtaaataaagcaatttctgaaggctctctttgtgaacatcaagtggttgtgaatgcctta
gtaggtgccatcccttccatcatgaacgttgtgcttgtctgcctcattttttggctcgtt
tttagtatcatgggagtgaacctatttgcaggaaaatttggaaaatgtgttaacttgact
gaagaaaaatcagaaataaataacagtattaagaacaaattggattgtacaacctataat
gacacacaaaaaatatattggataaatgttgtagtcaactttgataatgttggttctggt
tatctggctctacttcaagtggcgacatttaaaggttggatggacattatgtatgcagca
gtagattcacgagggaaagaaaaacagccaaagaaggacaataatccatacatgtacctc
tattttgtggttttcatcatctttggctctttcttcacactgaatctctttgtcggtgtt
attattgacaattttaaccaacaaaagaaaaagataagtggacaagacatctttatgaca
gaagaacagagaaaatattataatgcaatgaaaaaactgggatccaagaaaccccaaaaa
cccatcccaaggccattgaacaaataccaaggttttttttttgacatcgtaacaagcgaa
gcctttgatattatcatcatgattctcatctgccttaacatgatcactatgatggtggaa
actgataatcaaagtataaggaagactgacattcttaacaaaatcaacatgttctttgtt
gccatctttactgtagaatgcatcatgaaattattggccctaagacactactatttcacc
aatggctggaacatatttgatttaagtgtggtcattatgtctattgttggtactctggtt
tctcacattgttaatgcatttgaaaattacttctcacctacgctcttcagagtcattcgg
ttggctcagattggacgaatactaagactcatccgagctgccaaaggaattagaactctc
ctttttgccttaatgatgtctcttcctgctttgttcaacattggcctcttactctttcta
gtcatgtttatttatgccatttttggcatggctaactttgcttatgttcagtgggagggt
gggattgatgacatgttcaacttccaaacctttcctaacagcatgctctgtctcttccaa
atcacaacatctgctggctgggatggtcttctgagtcctattttaaacactggacctccg
ttttgtgatccaaacataaaaggtgttgtgggagaatgtggtaaacctgctgcaggtatt
attttctttgtaagttacatcattatatcatttctcattgttgtaaacatgtacatagct
gttattttagagaacttcagtgttgccactgaggaaagtacagatcctgtgggtgaagat
gattttgatatgttttataaaatctgggagaagtttgatcctgaagcaactcaatttatt
gagtattctgcactttcagactttgcagatgctttggcagaacctttacgcatagccaaa
ccaaacaaaattgaactcctagcaatggacattcccttggctagcggagataggatccac
tgtttggatattttgtttgcttttaccaaacgggtgctaggagaatctggggagatggac
aaactaaaagaacaaacagaggaaaagtttatggctgccaatccatccaggttttttcat
gaaccaatcacatccacgctcagacacaaagaggaggaggtttctgccattattatccag
agggcctataggagtcatttgattcaacggtccatgaagcaggcttctctcttatatcac
agaacttgtgatggtgacatccttgaagatgcttcacagaaagaaggtctcattgcattc
atgatgaatgagaattacggtaggaatctagacaagtccgagactgtgtcttcaacatct
ttccctccatcctataacagtgtcaccgaggacactaatgacaacctccaggtaaagaca
gtggactcttccaaatgtgatgtacgtataggatgtcagctatctccagacaaagataaa
gaatgcattgtttaa
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integrated database retrieval system
