Caballeronia sp. NK8: NK8_00360
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Entry
NK8_00360 CDS
T09553
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
cabk
Caballeronia sp. NK8
Pathway
cabk00550
Peptidoglycan biosynthesis
cabk01100
Metabolic pathways
cabk01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
cabk00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
NK8_00360 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
NK8_00360 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cabk01011
]
NK8_00360 (mrdA)
Enzymes [BR:
cabk01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
NK8_00360 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
cabk01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
NK8_00360 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
BCQ21928
LinkDB
All DBs
Position
1:complement(38971..41244)
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AA seq
757 aa
AA seq
DB search
MTEIKNTEQQLSKFRLRVAAAGLFVFVCFGLIGLRFLYLQVWHFSKYSLQANENRISVAP
IVPNRGIITDRNGVVLAKNYSAYTLEITRSKINGTLDETIDELSQVIPIDARDRRRFKKL
LEDSKNFESLPIRTRLTDEEVAKFTAQRFRFPGVEVRARLFRQYPLGTTAAHVIGYIGRI
SQRDQERIDDASDANDESSDHYDPRLDANNYKGTDYVGKIGVEQSYETELHGLTGFEEVE
VTAGGRPVRTMSRTQATPGNNLQLSLDIGLQQVAEQAFAGKRGALVAIEPSTGDVLAFVS
APSFDPNSFVDGIDQQTWDALNNSPDHPLLNRPLHGTYPPGSTYKPFMALAALTLHKRTP
GWGFQDPGYFTFGGHTFRNDVRSGQGWVDMNRAIVVSNDTYFYMLARDLGVNAMAGFMKP
WGFGQITGIDIAGEARGILPSTEWKRKAYRKPEQQRWYEGETISLGIGQGYNSFTILQLA
HATATLANNGVVMKPHLVRDIENPISKATRAVVRDPSDKIPVQQKDVDFIKRAMEGVVTN
GTAAKVFAGAPYLAAGKTGTAQVYSLQGANYKGHALAEHLRDHALFIAFAPAEQPKIALA
LIVENGGWGAESAGPIARKVLDYYLIDRMKPGAQAAAVAAAASATEDTGLPMIGGTQSPA
AVALPASVANSSPAFSPQAASNPNVAKAVTAPPLAASAPKASTPRAASTPPAAALPASTP
GRTPAPKKRPAEPTPTMVRGNENDGVRVLAPSGGIDE
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaaataaagaacaccgagcaacagttgtcgaagttccgcctgcgcgtcgcggcg
gcgggactgttcgtgttcgtctgcttcgggctgatcgggttgcgctttctgtatctgcag
gtctggcacttcagcaaatactcgctgcaggcgaacgaaaaccgcatttccgttgcgccg
atcgtgccgaatcgcggcatcatcaccgaccgcaacggcgtcgtgctggcgaagaactac
tccgcctatacgctcgaaatcacgcgttcgaagatcaacggcacgctcgacgaaaccatc
gacgaactctcgcaggtcattcctatcgacgcgcgtgaccgccggcgtttcaagaagctg
ctcgaagattcgaagaatttcgaaagcctgccgatccgcacgcggctcaccgatgaggaa
gtggcgaagttcacggcgcagcgctttcgctttccgggcgtcgaagtgcgggcgcgcctg
ttccgccagtatccgctcggcacgaccgccgcgcatgtgatcgggtacatcggccggatt
tcgcagcgcgatcaggagcgcatcgacgacgcgagcgacgccaatgacgaaagctcggat
cactacgatccgcgcctcgacgccaataactacaagggcacggactacgtcggcaagatc
ggtgtcgagcagagctacgagaccgagttgcacggtctgaccggtttcgaggaagtcgaa
gtcacggcgggcggtcgtccggtgcggacgatgtcgcgcacgcaggcgacgccgggcaac
aaccttcagttgtcgctggatatcggcttgcagcaggtcgcggagcaggcgttcgcgggc
aagcgcggcgcgctcgtcgcgatcgagccttccaccggcgacgtgctcgcgttcgtctcc
gcgccgagcttcgacccgaattcgttcgtcgacggcatcgatcagcaaacctgggacgcg
ctcaacaattcgccggatcacccgctcctgaatcgtccgctgcacggcacgtatccgccg
ggctcgacgtacaagccgttcatggcgctcgccgcgctgacactgcacaagcgcacgccg
ggctggggctttcaggatccgggctacttcacgttcggcggccacacgttccgcaacgac
gtgcgctcgggccagggctgggtcgacatgaaccgcgcgatcgtcgtgtcgaacgacacg
tacttctacatgctcgcgcgcgatctcggcgtcaacgcgatggccggcttcatgaagccg
tggggcttcggccagatcaccggcatcgatatcgcaggcgaggcgcgcggcattctcccg
tcgaccgaatggaagcgcaaggcgtaccgcaagcccgagcagcagcgctggtacgaaggc
gagacgatcagtctcggcatcggtcagggctataactcgttcacgatcctgcagctcgcg
cacgccaccgcgacgctcgcgaacaatggcgtcgtgatgaagccgcacctcgtgcgcgat
atcgaaaatccgatctcgaaggcgacgcgcgccgtcgtgcgcgacccgagcgacaagatc
cccgtgcagcagaaggacgtggatttcatcaagcgcgcgatggaaggcgtcgtcaccaac
ggtacggcggcgaaggtgtttgcgggcgcgccgtatctggcggcgggcaagaccggcacg
gcgcaggtctattcgttgcagggcgcgaactacaaggggcacgcgctcgccgagcatctg
cgcgatcacgcgctgttcatcgcgttcgcgcctgccgagcagccgaagatcgcgctcgcg
ttgatcgtcgaaaacggcggctggggcgcggagtccgccgggccgatcgcgcgcaaggtg
ctcgactactatctgatcgaccgcatgaagccgggcgcgcaagctgccgcggttgccgcg
gcggcatcggccacggaagacaccggcctgccgatgatcggcggcacgcaatcgcccgca
gccgtcgcgttgcccgcgtcggtcgcgaattcgtcgccggcgttttcgccgcaggccgcg
tcgaatccgaatgtcgcgaaggccgttaccgcgccgccgcttgcggcttccgccccgaaa
gcctcgacgccgcgcgccgcgtccacgccgcctgccgccgcgcttcccgcgtcgacgccg
ggccgcacgcccgcgccgaaaaagcgccccgccgagccgacgcccaccatggtgcgcggc
aacgaaaacgacggcgtgcgcgttctcgcgccgtctggcggcatcgacgagtaa
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