Caballeronia sp. NK8: NK8_05550
Help
Entry
NK8_05550 CDS
T09553
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
cabk
Caballeronia sp. NK8
Pathway
cabk01501
beta-Lactam resistance
cabk01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
cabk00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
NK8_05550
01503 Cationic antimicrobial peptide (CAMP) resistance
NK8_05550
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cabk02000
]
NK8_05550
01504 Antimicrobial resistance genes [BR:
cabk01504
]
NK8_05550
Transporters [BR:
cabk02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
NK8_05550
Antimicrobial resistance genes [BR:
cabk01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
NK8_05550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF
Motif
Other DBs
NCBI-ProteinID:
BCQ22445
LinkDB
All DBs
Position
1:591366..594530
Genome browser
AA seq
1054 aa
AA seq
DB search
MAKFFIDRPIFAWVIAIILMLAGMASIFTLPVAQYPTIAPPAIQISATYPGASASTVENT
VTQVIEQQMTGLDHLLYLSSTSDDSGTATVTLTFAAGTNPDIAQVQVQNKLQLATPLLPQ
VVQQLGTKVTKSSSSFLLVLAFVSEDGSMSKYDLANYVASNVADPLSRIDGVGTTTLFGS
QYAMRVWLDATKLTNYSLTPVDVKNAITNQNVQVAAGGLGGTPAVPGQMLQATITEATLL
RTPEQFGDILLKVNQDGSRVRLKDVARIELGGENYNFDTKYNGQPTAGFGIQLATGANAL
STAKAVRAKIDDLSKYFPHGLVVKYPYDTTPFVRLSIEEVVKTLIEGIVLVFLVMYLFLQ
NLRATIIPTIAVPVVLLGTFAIMSAVGFSINVLSMFGLVLAIGLLVDDAIVVVENVERVM
TEEHLSPRDATRKAMDQITGALIGVALVLSAVFVPVAFSGGSVGAIYRQFSLTIVAAMVL
SVMVALVLTPALCATLLKPHPEGHEPEKKGFFGWFNRTFNKSQEKYHGGVQHVIRRSGRW
LIIYIVVIVAVGMLFLRLPKSFLPDEDQGTMFVLVQAPAGSTQEYTAHVLKDVQDYLLKD
EKSIVESVFTVNGFSFAGRGQNSGLVFVRMKDYAERQHSNEKVQALVGRMFMHFAPYKDA
LIFPVNPPSIPELGTAAGFDFELQDRGGLGHAKLMEARNMLLGMAAKDPTLAQVRPNGLN
DTPQFKVNIDREKANALGVVISDIDQTFSIAWASQYVNNFLDVDNRIKKVYVQGDGPFRM
NPDDLSKWYVRNGAGTMVPFGAFATGNWTYGSPKLERYNGISAVEIQGAAAPGKSTGQAM
TAIEAIAAKLPAGIGYEWTGLSYQERQSGSQAPILYGISILVVFLCLAALYESWSIPFSV
IMVVPLGVLGALLAATLRGLENDVFFQVGLLTTVGLSAKNAILIVEFARELRMQGMSTVE
AAMEAARLRLRPILMTSLAFILGVLPLAISNGAGSASQHAIGTGVIGGMLTATFLAIFMI
PMFFVVISKFSKSKDMPAPGSSGDIEGTNGKEGH
NT seq
3165 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagttttttatcgatcggccgatcttcgcgtgggtgatcgcgatcatcctgatg
ctggcggggatggcgtcgatcttcacgctgccggtcgcgcagtatccgacgatcgcgccg
cctgcgatccagatcagcgcgacgtatccgggcgcatcggcgagcaccgtggaaaacacg
gtcacgcaggtgatcgagcagcagatgaccggtctcgaccacttgctgtatctgtcgtcg
acctccgatgactccggcacggccaccgtcacgctgacgttcgcggcgggcaccaatccg
gacatcgcgcaggtgcaggtgcagaacaagctgcagctcgccacgccgcttctgccgcag
gtcgtgcagcagctcggcacgaaggtcacgaaatcgagttcgagcttcctgctcgtgctc
gcgttcgtgtccgaagacggcagcatgagcaagtacgacctcgcgaactacgtggcgtcg
aacgtggccgatccgctctcgcgtatcgacggcgtcggcaccacgacgctgttcggctcg
cagtatgcgatgcgcgtctggctcgatgcgaccaagctgacgaactattcgctcacgccg
gtcgacgtgaagaacgccatcaccaatcagaacgtgcaggtggcggcgggcggtctcggc
ggcacgccggcggtgccggggcagatgctccaggcgaccatcacggaagcgacgctgctg
cgcacgcccgagcagttcggcgacatcctgctgaaggtgaatcaggacggctcgcgcgtg
cgtctgaaggatgtcgcgcgaatcgagctcggcggcgaaaactacaacttcgacaccaag
tacaacggccagccgacggccggcttcggtatccagcttgcgacgggcgccaacgcgctc
tccacggcaaaggcggtccgggcaaagatcgacgatctgtcgaagtacttcccgcatgga
ctggtggtgaagtatccgtacgacacgacgccgttcgtgcgcctgtcgatcgaggaagtg
gtcaagacgctgatcgaaggcatcgtgctcgtgttcctcgtgatgtatctgttcctgcag
aacctgcgggcgacgatcatcccgacgatcgcggtgccggtggtgctgctcggcacgttc
gcgatcatgtcggcggtgggcttctcgatcaacgtgctgtcgatgttcggtctcgtgctc
gcgatcggcctgctggtcgacgatgcgatcgtggtggtggagaacgtcgagcgggtgatg
accgaggagcatctgtcgccccgcgacgccacccgcaaggcgatggaccagatcacgggc
gcgctgatcggcgtggcgctggtgctgtcggcggtgttcgtgccggtggcgttctcgggc
ggctcggtcggcgcgatctaccggcagttctcgctgacgatcgtggccgcgatggtgctg
tccgtgatggtcgcgctggttctcacgccagcgctgtgcgcgacgctcctgaagccgcat
ccggaagggcacgagccggagaagaagggtttcttcggctggttcaaccgcaccttcaac
aagagtcaggagaagtaccacggcggcgtgcagcacgtgattcgccgctcggggcgctgg
ctcatcatctacatcgtcgtgatcgtcgcggtggggatgctgttcctgcgtctgccgaag
tcgttcctgccggatgaggatcagggcacgatgttcgtgctcgtgcaggcgcccgccggc
tccacgcaggaatacacggcgcacgtgctgaaggacgtgcaggactatctgctgaaggac
gaaaagtcgatcgtcgaatccgtgttcacggtgaacggcttctcgttcgcgggccgcggc
cagaactccggcctcgtgttcgtgcggatgaaggactacgcggaacgccagcacagcaac
gagaaggtgcaggcgctggtcgggcgcatgttcatgcacttcgcgccctacaaggacgcg
ctgatcttcccggtcaatccgccttcgattcctgaactcggcacggcggcgggcttcgac
ttcgagctgcaggatcgcggcggcctcggccacgcgaagctgatggaagcgcgcaacatg
ctgctcggcatggcggcgaaggacccgacgctcgcgcaggtgcgtccgaacggcctgaac
gacacgccgcagttcaaggtgaacatcgaccgcgagaaggccaacgcgctcggcgtcgtg
atttcggacatcgaccagacgttctcgatcgcctgggcgtcgcagtacgtgaacaacttc
ctcgacgtcgataaccggatcaagaaggtctacgtgcagggcgacggcccgttccgcatg
aatccggacgacctgagcaagtggtacgtgcgcaatggcgcgggaacgatggtgccgttc
ggcgcgttcgcgaccggcaactggacctacggttcgccgaagctcgagcgttacaacggt
atctcggcggtggaaattcagggcgcagcggctcccggcaagtcgacgggtcaggcgatg
acggcgatcgaagccatcgcggcgaagctgccggcgggcatcggctacgagtggacgggt
ctgtcgtatcaggaacggcagtcgggttcgcaggcgccgatcctgtacggcatctcgatc
ctcgtcgtgttcctgtgtctcgcggcgctgtatgaaagctggtcgattccgttctcggtg
atcatggtcgtgccgctcggcgtgctgggcgcgctcttggccgcgacgttgcgcggtctg
gagaacgacgtgttcttccaggtcggcctgttgacgacggtgggtctgtcggcgaagaac
gcgattctgatcgtggagttcgcgcgtgagctgcgcatgcagggcatgtcgacggtggaa
gcggcgatggaagcggcgcgcctgcggttgcgcccgattctgatgacctcgctcgcgttc
attctcggcgtgctgccgctcgcgatcagcaacggcgcgggctcggcgagccagcacgcg
atcggcaccggcgtgatcggcggcatgttgaccgcgacgttcctcgccatcttcatgatt
ccgatgttcttcgtcgttatcagcaagttcagcaagagcaaggacatgccggcaccgggt
tcgtcgggcgacatcgaaggcacgaacggtaaggaaggacactga
DBGET
integrated database retrieval system
