Caballeronia sp. NK8: NK8_20060
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Entry
NK8_20060 CDS
T09553
Symbol
rluC
Name
(GenBank) 23S rRNA pseudouridine(955/2504/2580) synthase RluC
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
cabk
Caballeronia sp. NK8
Brite
KEGG Orthology (KO) [BR:
cabk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cabk03009
]
NK8_20060 (rluC)
Enzymes [BR:
cabk01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
NK8_20060 (rluC)
Ribosome biogenesis [BR:
cabk03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
NK8_20060 (rluC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
EHN
Motif
Other DBs
NCBI-ProteinID:
BCQ23857
LinkDB
All DBs
Position
1:complement(2104951..2105895)
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AA seq
314 aa
AA seq
DB search
MIEVDETAAGQRIDNFLLRVCKGVPKSHIYRILRSGEVRVNKGRIDAAYRLELGDLVRVP
PIRTAQQDEMPVSSNAPAAEFPIIFEDDHLIVIDKPSGVAVHGGSGVAFGVIEQLRNARP
HAKFLELVHRLDRETSGVLMLAKKRAALVDLHEQIRENRVDKRYYALGHGEWQSDWGRRR
IVKAPLHKYVAADGERRVRIQENGLPSHTVFNLIERWRDYVWLEAELKTGRTHQIRVHMA
SIGLPIAGDAKYGDFALNKELARPSAKPSLKRMFLHAFRLKITHPATGEPLQFEAPLPAE
CKRFIEQLKNRETD
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaagtcgatgagaccgccgccggtcagcgcatcgacaatttcctgctgcgcgtc
tgcaagggcgtcccgaagagccatatttaccgcattctccgcagcggcgaagtgcgcgtg
aacaagggccgcatcgacgccgcgtaccggctggaactgggcgatctcgtgcgcgtgccg
ccgatccgcaccgcgcagcaggacgagatgccggtgtcgtcgaacgcgcccgccgccgaa
tttccgattattttcgaggacgatcatctgatcgtcatcgacaagccgtcgggcgtcgcg
gtgcacggcggcagcggcgtcgcgttcggtgtgatcgagcaattgcgcaacgcgcggccg
cacgccaaattcctcgaactggtgcatcggctggatcgcgagacgtccggcgtgctgatg
ctggccaagaagcgcgcggcgctcgtcgatctgcacgagcagattcgcgagaatcgtgtc
gacaagcgctattacgcgctcggtcacggcgaatggcagagcgactggggccgcagacgc
atcgtgaaggcgccgctgcacaagtatgtcgcggcggatggcgagcggcgcgtgcgcatc
caggaaaacggcttgccgtcgcatacggtcttcaatctgatcgagcgctggcgcgattac
gtgtggctcgaagcggaactgaagaccggccgcacgcaccagattcgcgtgcacatggcg
agcatcggcctgccgattgcgggtgatgcgaagtacggcgatttcgcgttgaacaaagaa
ttggcccgtccgagcgcgaaaccgtcgctcaaacgcatgtttttgcacgcatttcgtctg
aagataacccatcccgcgacgggcgagccgctgcaattcgaagcgccgctgcccgccgaa
tgcaagcgattcatcgaacaattgaaaaaccgagagacagactaa
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