Gottschalkia acidurici: Curi_c22700
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Entry
Curi_c22700 CDS
T02255
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
cad
Gottschalkia acidurici
Pathway
cad03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cad00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Curi_c22700 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cad03021
]
Curi_c22700 (rpoC)
03400 DNA repair and recombination proteins [BR:
cad03400
]
Curi_c22700 (rpoC)
Enzymes [BR:
cad01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Curi_c22700 (rpoC)
Transcription machinery [BR:
cad03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Curi_c22700 (rpoC)
DNA repair and recombination proteins [BR:
cad03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Curi_c22700 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
RPOC_hybrid
Motif
Other DBs
NCBI-ProteinID:
AFS79273
UniProt:
K0AZP8
LinkDB
All DBs
Position
complement(2380410..2383967)
Genome browser
AA seq
1185 aa
AA seq
DB search
MEGRDNPLFELENFDSIKIALASPEKIRQWSKGEVKKPETINYRTLKPEKEGLFCEKIFG
PTKDWECHCGKYKRVRYKGVVCDRCGVEVIKAKVRRERMGHIELAAPVSHIWYFKGIPSR
MGLILDMSPRSLEKVLYFASYIVIDPGETSLSEKQLLNEGEYREAKENYDKAGQKFRAAM
GAEAVKELLAKIDLEKEAKELRSQLKDSTGQKKIRIIRRLEVVEAFRQSGNRPEWMILDV
VPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPDIIVRNEKRMLQE
AVDALIDNGRRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPEL
KFYQCGLPKKMALELFKPFVMKKLVNENYAHNIKSAKRMVEKVKPVVWDVLESVIKEHPV
LLNRAPTLHRLGIQAFEPILVEGKAIKLHPLVCTAYNADFDGDQMAVHVPLSTEAQAEAR
FLMLSTNNILAPKDGKPITTPTQDMVLGSYYLTVENDEEIGTGMVFKDFEEMYMAYQNKA
VGLHARVKVRVKLSQDDRGKLVESTVGRFIFNEHIPQNLGFVDRSKDKYSLEIDTLVDKK
MLGKIVDKCYRKHGNTVTSIVLDHIKSTGFKYSTIGAITVSIEDIIVPEEKFVLIGEAEE
LVDKYEKSYRRGLISDEERYERVIEVWSKTTEKVTEALMSGLDEMNNIFIMAQSGARGSK
NQIRQLAGMRGLMANASGRTVEQPIRSNFREGLTVLEFFTSTHGSRKGLADTALRTADSG
YLTRRLVDVSQDVIIREEDCGTEEYLLARAFKDGKEVIEELWDRIEGRYSFEDVFDPNTG
EKIVGALELITEDIADKIIATGIEEVKIRTALACRTRHGVCSKCYGRNLATGTSVNIGEA
VGIIAAQSIGEPGTQLTMRTFHTGGVAGADITQGLPRVEELFEARKPKGLAIITEIPGKV
TILESKRKREVTVTSGDGESRSYSIPYGSRIKVREGNVLEAGDEITEGSVNPHDILKIKG
EAGVQSYLVKEVQRVYRLQGVDINDKHIEVIVRQMLNKVKIEDSGDTDLLPGGLINTFEY
EKENERVESEGGKPAVGTTVLLGITKASLATESFLSAASFQETTRVLTEAAIKGKEDNLI
GLKENVLIGKLIPAGTGMKRYKSIAINTEEKDEIEEEINVDTITN
NT seq
3558 nt
NT seq
+upstream
nt +downstream
nt
atggaagggagagataaccccttgtttgaacttgaaaattttgattcaataaaaattgct
ttagcatccccagagaagataagacaatggtctaaaggggaagttaaaaaaccagaaact
attaactataggacgctaaaaccagaaaaagaaggattattctgtgaaaaaatatttgga
cctactaaagactgggagtgtcactgtggtaagtataaaagagtaagatataaaggtgta
gtatgtgacagatgtggagtagaagtaataaaggccaaagtaagaagagaaagaatggga
catatagaattagcagctccagtttctcatatttggtactttaaaggaataccaagtaga
atgggacttatattagatatgtctccaagatcgctagagaaagtattgtactttgcatct
tatatagtaatagatccgggtgaaacttctctttcagagaaacagcttttaaatgaaggc
gaatatagagaggctaaagagaactatgataaagctggccagaagtttagagctgctatg
ggagcagaagctgtaaaagaacttttagctaaaatagacttagaaaaagaagccaaagaa
ttaagaagtcagcttaaagacagtacaggacagaagaaaataagaataataagaagatta
gaagttgtagaggcattcagacaatctggaaatagaccagaatggatgatcttagatgta
gtaccagttataccacctgacttaagacctatggtccaattagatggtggtagattcgca
acttcagacttgaatgacctatatagaagagttataaatagaaataatagacttaaaaga
cttctagacttaggagctccagatataattgtaagaaatgaaaagagaatgttacaagaa
gctgtggatgctcttatagacaatggtagaagaggaagacctgtaactggtccgggaaat
agacctttaaaatctctttcagatatgcttaaaggtaagcaaggtagattcagacaaaac
ttacttggaaaaagggtagattattcagggcgttcggttatagtagttggtccagaacta
aaattctatcaatgtggtcttcctaaaaaaatggcactagagctatttaaaccatttgta
atgaaaaaattagtaaatgaaaattatgctcataatattaagagtgcaaaaagaatggtt
gagaaagttaagccagtagtatgggatgttttagagtctgtaataaaagagcatccagta
ttactaaaccgtgcaccgacattacacagactgggaatacaagcatttgaacctatacta
gtagaaggaaaagctataaagctacatccactagtatgtacagcttataacgctgacttt
gatggtgaccaaatggcagtacacgttccactatcaacagaggcacaggctgaggcaaga
ttcttaatgctttcaactaataatattttagctcctaaagatggtaagcctataactact
ccaactcaagatatggtactaggaagttactatttgacagttgagaatgatgaggaaata
ggaactggtatggtatttaaagactttgaggaaatgtatatggcataccaaaataaagcc
gttggacttcatgctcgagttaaggtaagagtaaagctttcacaagatgatagaggaaag
cttgtagaaagtactgttggtagatttatatttaatgaacacataccgcaaaatttagga
ttcgttgatagaagtaaagataaatactcactagagatagataccctagttgataagaaa
atgctaggaaagatagtagataagtgctacagaaaacatggaaacactgtaacttcaata
gttttagaccatatcaaatctacaggattcaaatattctacaataggagctattacagtt
agtatagaagatattatagttccagaagaaaagtttgttcttataggagaagcagaagaa
ctagtagataagtatgaaaagtcttatagaagagggcttatatcagatgaagaaagatat
gagagagttatagaggtatggagtaaaactactgaaaaagttactgaagctcttatgagt
ggattagatgaaatgaataatatattcataatggcacaatcaggagcgagaggtagtaaa
aatcagataagacagcttgcgggtatgaggggtcttatggcaaatgcttcaggtagaaca
gtagagcagcctataagatctaactttagagaaggacttacagttcttgaattctttact
tcaactcacggttctcgtaaaggtcttgcagatacggcactaagaactgccgattcagga
tatttaactagaagattagttgatgtcagtcaagatgttataataagagaagaagattgt
ggtacagaagaatatctattagcaagagcatttaaagacggaaaagaagttatagaagaa
ctatgggatagaatcgaaggtagatatagctttgaagatgtgtttgatcctaatacggga
gaaaaaatagtaggagctctagaattaattacagaagatatagctgataaaataatagct
actggaatagaagaagttaagataagaactgcactagcatgtagaactagacatggtgtt
tgttcaaaatgttatggtagaaacttagcaacaggaacatctgttaatataggagaagca
gtaggtataatagctgcacaatcaataggggagcctggtacacaacttactatgcgtact
ttccatacaggaggagtagcaggagcagatattacacagggtcttccaagggtagaagag
ttatttgaagctagaaaaccaaaaggtcttgcgattataacagaaataccaggaaaggtt
acaatacttgaatcaaaaagaaaaagagaagtaaccgtaacatctggagatggagaatca
agaagttacagcataccatatggttcaaggattaaagttagagaaggaaatgtactggag
gctggagatgaaattacagaaggttcagtaaatccacatgatattttgaagataaagggt
gaagctggagttcagtcatatcttgtaaaagaagttcaaagagtttatagacttcaaggt
gttgatataaacgataaacatatagaagttatagttagacaaatgttgaacaaggttaaa
atagaagattcaggagatacagatttattaccaggaggacttataaatacatttgaatat
gaaaaagaaaatgaacgtgtagagtctgagggtggaaaaccggctgttggtacaacggta
ttattaggtattaccaaagcatctttagctactgagtcattcttatcagcagcttcattc
caagaaacaacaagagtattaactgaagcagctataaaaggaaaagaagataacttaata
ggactgaaagaaaatgttcttataggtaagttaattcctgcaggaacagggatgaaaaga
tataaaagtatagctataaatacagaagaaaaagatgaaattgaagaagagataaatgtt
gacactataactaactga
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