Caenibius sp. WL: K5X80_12295
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Entry
K5X80_12295 CDS
T08345
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
caen
Caenibius sp. WL
Pathway
caen03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
caen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
K5X80_12295 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
caen03400
]
K5X80_12295 (uvrB)
DNA repair and recombination proteins [BR:
caen03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
K5X80_12295 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
K5X80_12295 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_19
UB2H
AAA_16
SWI2_SNF2
Kinesin
DUF87
AAA_22
Microtub_bd
AAA_33
SRP54
Motif
Other DBs
NCBI-ProteinID:
QZP07446
LinkDB
All DBs
Position
2564876..2567062
Genome browser
AA seq
728 aa
AA seq
DB search
MAELVIRRGLEEPDTSGSFVPHKPQRPDKTDGGKPFKIVSDYEPAGDQPTAIAELVTAAK
DGEKTQVLLGVTGSGKTFTMAKVIEHLQRPALILAPNKILAAQLYGEFKSFFPGNAVEYF
VSYYDYYQPEAYVPRSDTYIEKESSVNEAIDRMRHSATRALLERDDVIIVASVSCLYGIG
SVETYSAMIFDLKKGDTADQREIIRKLVALQYKRNDAAFARGNFRVRGDNLEIFPSHYED
MAWRISFFGDEIEEIAEFDPLTGKKGASLDKVRVYANSHYVTPGPTMKQASEAIKFELSE
RLKELNAEGRLLEAQRLEQRTNFDLEMIAATGSCAGIENYSRFLTGRLPGEPPPTLFEYL
PDNALLFVDESHQTVPQIGAMARGDHRRKLTLAEYGFRLPSCIDNRPLRFNEWDAMRPQT
VAVSATPGSWEMEQTGGVFAEQVIRPTGLIDPPVEIRPVEDQVQDCINECRETAAKGYRT
LVTTLTKRMAEDLTEFMHEAGVKVRYMHSDVETLERIELIRDLRMGVYDVLVGINLLREG
LDIPECGLVCILDADKEGFLRSETSLVQTIGRAARNVDGRVILYADRMTGSMERAIAETD
RRRDKQRAFNEEHGITPQTIRRQIADIVAHTAAQDGVTVDIDADGRNNLVGHNLRAYIEE
LEAKMRAAAADLEFEEAGRLRDEIRRLEAEELGLPEAEHKAPLVGRSNEGRPGTRKMRYG
KTQRKWGR
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atggctgaactcgtgatccgacgcggactggaagaacccgatacctcgggcagctttgtt
ccgcacaaaccgcagcgcccggacaagacggacggcggcaaaccgttcaagatcgtgtcc
gattatgaaccggcgggcgaccagcccaccgcgatcgccgaactcgtgaccgctgcgaag
gacggtgaaaagactcaggtgctgctgggtgtgaccggctcgggcaagactttcaccatg
gccaaagtgatcgagcacttgcagcgccccgccctgattctggcccccaacaagattctc
gccgcccagctctatggggagttcaaaagcttcttccccggaaatgcggtggaatatttc
gtcagctattatgactactatcaaccggaagcatacgtcccgcgcagcgatacctatatc
gagaaggaaagctcggtaaacgaggccatcgaccggatgcgccactcggccacccgcgcc
ctgctcgaacgcgatgacgtgattatcgtcgcttccgtgtcatgcctctacgggatcggc
tcggtcgaaacctattccgcaatgattttcgacctgaagaaaggtgacaccgccgatcag
cgcgaaatcatccgcaagctggtcgctctgcaatacaagcgcaacgatgccgcgttcgcc
cggggcaatttccgcgtgcggggggataatctcgaaatcttccccagccactatgaggat
atggcttggcggatcagcttcttcggcgacgagatcgaggagatcgccgagttcgacccc
ctcaccggcaagaagggcgcttcgctcgacaaagtgcgggtctatgccaattcgcattat
gtcacgccggggccaacgatgaagcaggcatcggaagcgatcaaattcgaactgtccgaa
cggctcaaggagctgaacgcagaagggcgcctgctggaagcccagcggctggaacagcgg
accaatttcgaccttgagatgatcgccgccaccggatcgtgcgcggggatcgagaattac
agccgtttcctgaccggccgcctgccgggcgaaccgccgccgacgctgttcgaatacctg
cccgataacgccttgctgttcgtcgacgaaagccaccagacggtgccacagatcggcgcg
atggcgcgcggcgaccatcgccgcaagctgacgctggcggaatatggcttccgcctgccg
agttgcattgacaaccgcccgctgcgtttcaacgaatgggatgcgatgcgcccgcagacg
gtggccgtttccgccactcccggttcctgggaaatggaacagaccggcggggtgttcgcc
gaacaggtgatccgccccaccggtttgatcgatccgccggtggaaatccgcccggtggaa
gatcaggtgcaggattgcatcaacgaatgccgtgagacggcggcaaaggggtatcgcacg
ctggtcacgaccctcaccaagcgaatggccgaggatctgaccgaattcatgcacgaagcg
ggtgtcaaagtccgctacatgcattcggatgtcgaaacgctggagcgtatcgaactgatc
cgcgatctgcggatgggcgtgtacgacgtgcttgtggggatcaatctcctgcgcgaaggg
ctcgacatccccgaatgcggcctcgtctgcattctcgatgctgacaaggaggggttcctg
cgcagcgaaacctcgctggtgcagaccatcggccgggccgcgcgcaatgtcgatgggcgg
gtaatcctctatgccgaccgcatgaccggcagcatggaacgcgcgatcgccgaaaccgat
cgccgccgcgacaagcaacgcgctttcaacgaggagcatggcatcacgccgcagaccatc
cgccgccagatcgccgatatcgtggcccacacggcggcgcaggatggggtaacggtcgat
atcgacgcggatggccgcaacaatctcgtcggccacaacctacgtgcttatatcgaagag
ctggaagcgaaaatgcgcgcggcggcggccgatctcgagttcgaggaagccgggcgcctg
cgcgatgagattcgccgcctggaagcagaggagcttggtctgccagaagcggaacacaag
gccccgctcgtgggccgcagcaacgaaggccgccccggcacgcgcaagatgcgttatggc
aagacccagcggaaatgggggcgctga
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