Collinsella aerofaciens: CSV91_00775
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Entry
CSV91_00775 CDS
T05143
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
caer
Collinsella aerofaciens
Pathway
caer03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
caer00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CSV91_00775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
caer03400
]
CSV91_00775
DNA repair and recombination proteins [BR:
caer03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CSV91_00775
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CSV91_00775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
DEAD
UVR
AAA_30
AAA_16
Kinesin
AAA_22
SWI2_SNF2
Microtub_bd
AAA_5
Motif
Other DBs
NCBI-ProteinID:
ATP53199
UniProt:
A0A2D1TV12
LinkDB
All DBs
Position
173834..176074
Genome browser
AA seq
746 aa
AA seq
DB search
MAEFEVERVGGELKRFGVEGSEVAFKVVSPYEPAGSQPKAIESLVQGVRDGDRYQVLLGV
TGSGKTFTMAKTIEALGKPTLVMAPNKTLAAQLASELKEFFPNNAVVYFVSYYDYYQPEA
YVPQSDTYIEKDSSINEEVEMLRHQATASLLSRRDVIVVASVSCIYGIGSPEDYAGLAPN
VDKKVPLERDDFIHALIDIQYDRNDYDLARGTFRVRGDVVDVYPPYAEHPLRFEFFGDEV
ELIAEIDEVTGEMLREYEAIPVWPASHYVTEKPKVKAALKSISEECEKRVAELKATDKLL
EAQRLQQRTDYDLEMLETMGFCNGIENYSRHLDGRKPGEPPFTLIDYFPKDMLCIIDESH
VTVPQIRGMHEGDRSRKVTLVEHGFRLPSALDNRPLRFDEFEARIPQFIYVSATPGDYEL
RVSQNDVEQIIRPTGLLDPKIDVRPVRGQIDDLEDEIRERVARKERVLVTTLTKRMAEDL
TDHLLDAGIKVNYMHSDTATMDRVEILRTLREGKIDVLVGINLLREGLDLPEVSLVAILD
ADKEGFLRNRRSLIQTIGRAARNADGEVIMYADVVTDSMKEAIEETQRRREIQMAYNEEH
GIVPKTVRKAINDISSFIAEAEKTVGSKGRSKGDSLGHGAFYTPDESGEGGVPETVASEQ
TLAGQLEELPHDELVRIVETMEEDMRNASAAMDFEEAARLRDAVVQIRAMLEGASEDETI
ERLRSQARKGSMFASGRKRQGARFKK
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atggcggaatttgaagttgagcgtgttggaggagagctcaaacgttttggcgttgagggc
tctgaggtggcatttaaggttgtatctccttatgagcctgcaggttctcagcctaaggcc
attgagtcgcttgtgcagggtgtgagggacggagatcgctatcaggttttgctgggcgtg
actggttcgggcaagaccttcacgatggctaagactattgaggccctggggaagccgacg
ctggtcatggctcccaataaaacgctcgccgctcagcttgcgagcgagctcaaagagttc
tttcccaacaacgctgtggtctactttgtctcgtactacgactactatcagcccgaggcg
tatgtgccgcaaagcgatacatatatcgagaaagactcctcgattaacgaagaggtcgag
atgctgcgccatcaggcgaccgcgtcactgctctctcgacgcgatgtgatcgttgtcgca
tcggtctcgtgtatctatggcattggctctcctgaggactatgcgggtctggctccaaac
gtcgacaagaaggtgccgctcgagcgcgatgactttatccatgcacttatcgacattcaa
tatgatcgcaatgactatgacctggcacgcggcacgttccgcgtgcgcggcgatgttgtc
gacgtgtatccgccttatgccgagcatccgttgcggtttgagttctttggcgacgaggtc
gagctgattgccgagatcgatgaggtcaccggagagatgcttcgtgagtacgaggccatc
cccgtatggccggcatcgcactacgtgaccgagaagccgaaggtcaaggcggctctgaaa
tcgatcagcgaagagtgcgagaagcgcgtggcggagctcaaggcgaccgacaagttgctc
gaggcgcagcgtctgcagcagcgcaccgattatgatcttgagatgctcgagacgatgggc
ttttgcaacggcatcgagaactactcgcgtcatctggacggtcgcaagccgggtgagccg
ccgtttaccctgatcgattactttcctaaggacatgctctgtatcatcgacgagagccat
gtgacggtgccgcagatccgcggcatgcatgaaggcgaccgctcgcgtaaggtaacgctg
gtggaacacggttttcgcctgccctcggcactcgataatcgcccgcttcgtttcgatgag
tttgaggcaaggataccccagtttatctatgtttcggccacgccgggcgactacgagctg
cgggtgagccaaaacgacgtggagcagattattcgtccgaccggtctgctcgaccccaag
atcgatgtgcgtccggttcgtgggcagattgacgatcttgaggacgagattcgcgagcgc
gttgcccgcaaggagcgcgtgctggtgaccacgctcaccaagcgcatggccgaggacctg
accgaccatctgcttgatgccggcattaaggtcaattacatgcactccgatacagcgacg
atggaccgtgtcgagatcctgcgaacgctgcgcgagggcaagatcgatgttctcgttggc
atcaacctgcttcgcgagggcctagaccttcccgaggtctcactggtggcaattctcgat
gccgataaggaaggcttcttgcgcaaccgccgttcgctgattcagacgattggccgcgcg
gcccgtaacgccgatggcgaagtcatcatgtatgcggacgttgtgaccgattcgatgaaa
gaggccatcgaggagacgcagcgccgtcgcgagattcagatggcatataacgaagagcat
ggcattgtgccaaagacggtgcgcaaggccatcaacgacatctcaagttttattgccgag
gccgaaaaaaccgtgggttccaaggggcgctcgaagggcgactctcttggccatggcgca
ttctatacgcccgatgagtcgggcgagggtggcgtgccggaaacggtggcgtccgagcag
acacttgcggggcagttggaagaactgccgcatgacgagcttgtgcggatcgtcgaaacc
atggaagaggatatgcgtaacgcttctgccgccatggactttgaggaggcggcgcgcctg
cgcgatgccgtcgttcagattcgggcgatgctcgagggtgcgtctgaggacgagacgatt
gagcgcttacgttcgcaggcccgcaagggttccatgttcgcatcgggcagaaaacgccag
ggtgcacggtttaagaaatag
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