Citrobacter amalonaticus FDAARGOS_165: AL524_17970
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Entry
AL524_17970 CDS
T04738
Name
(GenBank) L,D-transpeptidase
KO
K21470
L,D-transpeptidase YcbB
Organism
caf
Citrobacter amalonaticus FDAARGOS_165
Brite
KEGG Orthology (KO) [BR:
caf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
caf01002
]
AL524_17970
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
caf01011
]
AL524_17970
Peptidases and inhibitors [BR:
caf01002
]
Cysteine peptidases
Family C82
AL524_17970
Peptidoglycan biosynthesis and degradation proteins [BR:
caf01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
AL524_17970
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
AVC45290
UniProt:
A0A8B3ZX50
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All DBs
Position
complement(3710753..3712603)
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AA seq
616 aa
AA seq
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MLLNKIGGRRFSAISLCLAVVFAPLSSVQADEPEVIPGDSPVVVSEQSLAQPQAQSGATA
VMAGLQPLPEGAAEKARAELQSQLPSGYTPVYMNQLELLYAARDMKPMWENREAVKAFQQ
QLAEVAIAGFQPQFTTWVALLTDPAVNGIARDLVLSDAMMGYLHLIANIPVKGNRWLYSS
KPYALATPPLSVINQWQVALDNGQLPTFIAGLAPQHPQYASMHASLLALVGDSRPWPQLT
GKATLRPGQWSNDVPALREILQRTGMLEGGPKIALPGDETPSEAVVSPSAVAVETPSADT
AKQTAPRSKPAPAVRAAYDKELVEAVKRFQTWQGLGADGAIGPATRDWLNVTPAQRAGVL
ALNIQRLRLLPSELSTGIMVNIPAYSLVYYQNGNQVLASRVIVGRPDRKTPMMSSALNNV
VVNPPWNVPPTLARKDILPKLWNDPGYLERHGYTVMRGWNSREAIDPWQVDWSTITPSNL
PFRFQQAPGARNSLGRYKFNMPSSDAIYLHDTPNHNLFQKDSRALSSGCVRVNKASELAN
MLLQDAGWNDTRISDALKQGDTRYVNIRQTIPVNLYYLTAFVGADGRTQYRTDIYNYDLT
ARSSAQIVAKAEQLIR
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgttgcttaataaaattggtggtcgtcggttctcggcaataagtttatgcctggccgta
gtattcgctccactgtccagtgttcaggctgatgagcctgaagtgatacctggcgacagc
cctgtcgttgtcagtgaacagagtctcgctcagccgcaggcgcaatctggcgcaacggcg
gtgatggcgggtctgcagccactccctgagggggcggcggaaaaggcgcgagctgagctt
cagtcgcaacttccttcaggctatacgcctgtctatatgaatcaacttgaactgctttat
gcggcgcgcgatatgaaacccatgtgggaaaatcgcgaagccgtcaaagcgttccagcaa
cagctggcagaggtcgctattgcaggcttccagcctcagttcaccacctgggtggcgtta
ctgaccgatcctgccgttaacggcatcgcgcgcgatctggtgttgtctgatgcgatgatg
gggtatctccatctgatcgccaatattccggtcaaaggcaaccgctggctgtacagcagt
aaaccgtatgcactggcgacgccaccgctgtcggtcatcaatcagtggcaggttgcgctg
gataatggacaacttccgacgtttattgccgggctggcacctcagcacccgcagtatgcg
tcaatgcacgcgtcgctattagcgctggtgggtgattcacgtccatggccgcaactgacc
ggcaaagcaacgctacgaccgggtcagtggagcaacgacgtgcctgcgctgcgggaaata
ctgcaacgtaccgggatgctggaaggcggaccgaaaattgcgctgccgggagatgagacc
ccgtcagaagcggtggtcagcccgtcagccgttgccgttgaaaccccgagcgctgacacg
gcaaaacagactgcgccgcgcagtaagccagcaccggctgtccgtgctgcgtatgataaa
gagctggttgaagcggtaaaacgcttccagacgtggcaagggttgggcgcagatggcgct
attggcccggctacccgcgactggctgaacgtgacccccgcgcagcgtgcaggggtactg
gcgctcaatatccagcgtctgcgtttgcttccatctgaactgtcgacgggtattatggtg
aatattccggcgtattcgctggtttattatcagaatggtaatcaggtgctggcgtccagg
gtgattgtcggtcgtcccgatcgtaaaacgccgatgatgagcagcgcgctgaataacgtg
gtggtcaatccgccatggaacgtcccgccgacgctggcgcgtaaggatattctgcccaag
ctgtggaacgatcctggctaccttgaacgtcacggctataccgtgatgcggggctggaac
agcagagaagcgattgatccgtggcaggttgactggtcaaccatcacgccgtcaaattta
ccgttccgtttccagcaggcgccgggagcgcgtaactcgttgggccgctacaagttcaat
atgccaagttccgatgcaatttatctgcacgacacgcctaaccataatttgttccagaag
gattcccgggcgcttagttccggttgcgtgcgtgtgaacaaggcttctgaactggcaaac
atgctgttacaggatgcgggctggaacgatacgcgaatttccgatgcgctgaagcagggc
gacacgcgctacgtcaatattcgtcagactatcccggtcaatctgtattacctgacggcg
tttgttggcgcggacgggcgtacccagtatcgtacagatatttacaattatgatctgaca
gcgcgatccagcgcacaaattgtggcaaaagcagaacaattaatcaggtaa
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