Corynebacterium afermentans subsp. lipophilum: CAFEL_00950
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Entry
CAFEL_00950 CDS
T09361
Symbol
rmlD
Name
(GenBank) dTDP-4-dehydrorhamnose reductase
KO
K23987
dTDP-4-dehydrorhamnose 3,5-epimerase/reductase [EC:
5.1.3.13
1.1.1.133
]
Organism
cafe
Corynebacterium afermentans subsp. lipophilum
Pathway
cafe00521
Streptomycin biosynthesis
cafe00523
Polyketide sugar unit biosynthesis
cafe00541
O-Antigen nucleotide sugar biosynthesis
cafe01100
Metabolic pathways
cafe01110
Biosynthesis of secondary metabolites
cafe01250
Biosynthesis of nucleotide sugars
Module
cafe_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
cafe00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
CAFEL_00950 (rmlD)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
CAFEL_00950 (rmlD)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
CAFEL_00950 (rmlD)
Enzymes [BR:
cafe01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.133 dTDP-4-dehydrorhamnose reductase
CAFEL_00950 (rmlD)
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
CAFEL_00950 (rmlD)
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Motif
Pfam:
RmlD_sub_bind
dTDP_sugar_isom
Epimerase
GDP_Man_Dehyd
NAD_binding_4
Motif
Other DBs
NCBI-ProteinID:
WJY57979
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Position
complement(220366..221694)
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AA seq
442 aa
AA seq
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MTTIDGLEVHQLTVHEDNRGWFKENWSGQKLTPKQHNVSFNARRGATRGMHAEPWDKWVS
VATGRVFGAWVDMREGSATYGEKFTCEIGPDTAVFVPRGVANGFQALEDDTTYIYLVNQR
YSPGGAFCSYKEIDWPLEPTELSAKDLEHPMLIDATALPPRRILVTGANGQLGRALRQIW
SEDQAHFVGHDEFDICHVADAAKSAGIDWADYWAIVNCAAYNDVNGAEDDRAGAWRVNAA
APAELASISNEHDLTLVHVSSDYIFDGNVEVHDEAEAPSPLSAYGASKAAGDTAAQVARK
HYVVRTSWVFGDGRNFMSVMADLAAKSAAPKVVCDQRGRPTWAEDLAKGIAHLLDTGAEY
GVYNITSDGDAATRDEIAMAVFIAVGGDPADVHPVTTEQYGAEFGVEAPRPRESTLVLDK
IKATGFNPTNWRAALALYVALR
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccatcgacggcctcgaggttcaccaacttaccgtccacgaggacaaccgtggc
tggttcaaagagaactggtccggccaaaaactcaccccgaagcagcacaacgtcagcttc
aacgcccgccgcggcgccacccgcggcatgcacgccgagccgtgggacaagtgggtctcc
gtggccaccggccgcgtgttcggcgcgtgggtggacatgcgcgaaggctccgccacgtac
ggcgagaagttcacctgcgagatcggcccggacaccgccgtgttcgtcccccgcggcgtg
gccaacggcttccaggcgctcgaggacgacaccacctacatctacctggtcaaccagcgc
tactcccccggcggcgcgttctgctcctacaaggaaatcgactggccgctcgagcccacc
gagctgtccgccaaagacctcgagcatcccatgcttatcgacgccacagcgctgccccca
cgccgcatcctcgtcaccggcgccaacggccagcttggacgcgccctgcgccaaatctgg
tcggaggaccaggcccacttcgtgggccacgacgagttcgacatctgccacgtcgccgac
gcggcgaaaagcgccggcattgactgggcggactactgggcgattgtgaactgcgccgcc
tacaacgacgtcaacggcgcggaggacgaccgggccggggcatggagggtgaatgcggcg
gcgccggcggagcttgcgtcgataagcaatgagcacgacctcacgctcgtccatgtctcc
tccgactacatcttcgacggcaacgtcgaggtgcacgacgaggctgaggccccgtcgccg
ctgagcgcgtacggcgcgtcgaaggccgccggcgacactgccgcgcaggtcgcgcgcaag
cactacgtggtgcgcacgagctgggtgttcggcgacggccgcaacttcatgtccgtcatg
gccgacctcgcggcgaaaagtgcggcgccgaaggtggtctgcgaccagcgcggccgcccc
acctgggcggaggacctggccaaaggtatcgcgcacctgctcgacaccggcgccgagtac
ggcgtgtacaacatcacctccgacggcgacgccgccacgcgcgacgagatcgccatggcc
gtgttcatcgccgtcggcggcgacccggcggacgtccaccccgtgaccaccgagcagtac
ggcgccgaattcggcgtggaggcgccgcgcccccgcgaatccaccctggtgctggacaaa
atcaaagccacaggtttcaacccgacgaactggcgcgcggcgctggcgctgtatgtggcg
ctgcggtag
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