Corynebacterium afermentans subsp. lipophilum: CAFEL_03400
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Entry
CAFEL_03400 CDS
T09361
Symbol
tag
Name
(GenBank) DNA-3-methyladenine glycosylase 1
KO
K01246
DNA-3-methyladenine glycosylase I [EC:
3.2.2.20
]
Organism
cafe
Corynebacterium afermentans subsp. lipophilum
Pathway
cafe03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cafe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CAFEL_03400 (tag)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cafe03400
]
CAFEL_03400 (tag)
Enzymes [BR:
cafe01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.20 DNA-3-methyladenine glycosylase I
CAFEL_03400 (tag)
DNA repair and recombination proteins [BR:
cafe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CAFEL_03400 (tag)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adenine_glyco
Motif
Other DBs
NCBI-ProteinID:
WJY58459
LinkDB
All DBs
Position
complement(707849..708472)
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AA seq
207 aa
AA seq
DB search
MTDLHRTPETDPESGWPVIGDDGRARPPWAAADPLLREYYDTEWGMPVTDEQGMFERVCL
EGFQVGLSWRLILQKRDALRAAFHGFDPEEVAGMSIEHLLDDASLIRNRRKLEAAVKNAQ
ATLDLREQGTHLGEFVWSYQPEHTPVPRTMAEVPTRSAESEQLAKDLKKRGFTFVGPVTM
YALMESTGIIDTNLVGTWRRGASGVWA
NT seq
624 nt
NT seq
+upstream
nt +downstream
nt
atgactgatcttcatcgcacaccagagaccgatcccgaatccggctggcccgtcatcggc
gacgacgggcgagcccgcccgccgtgggccgccgccgacccgcttttgcgcgagtactac
gacaccgaatggggcatgcccgtcaccgacgagcaaggcatgttcgagcgcgtctgcctc
gaaggcttccaggtggggttgtcctggcggctgatcctgcaaaagcgcgatgcgctgcgc
gcggcgttccacggtttcgacccggaggaggtcgcgggtatgagcatcgagcatctgctt
gacgacgcttccttgatccgcaaccggcgcaaactcgaagctgcagtgaaaaacgcccag
gccacgctagacctgcgggaacagggcacacacctgggcgagttcgtgtggtcctaccag
ccggaacacacgccggtgccgcgcacgatggcggaggtgccgacgcgctcggccgaatcc
gagcaactggcgaaggacttgaaaaagcgcggcttcaccttcgtggggccggtgaccatg
tacgcgctgatggaatccaccggcatcatcgacaccaacctggtgggcacctggcgccgc
ggtgcgtccggggtgtgggcttaa
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