Corynebacterium afermentans subsp. lipophilum: CAFEL_03560
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Entry
CAFEL_03560 CDS
T09361
Symbol
sdrD3
Name
(GenBank) Serine-aspartate repeat-containing protein D precursor
Organism
cafe
Corynebacterium afermentans subsp. lipophilum
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RibLong
CarboxypepD_reg
CarbopepD_reg_2
CooC_C
SdrD_B
MetallophosN
SpaA
EMC7_beta-sandw
Rib
fn3_3
MG2
Motif
Other DBs
NCBI-ProteinID:
WJY58491
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All DBs
Position
742081..746160
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AA seq
1359 aa
AA seq
DB search
MSLPGKDCVRAKRITAVATVLALAGGAAEIPLGPVGSVAHAQIAPTQQPGIDNGTVRTAG
RDWEASVFFLTGMTVRTVSIDFVPADSTNPREEAPADDPVFTRIPEIADYRVDHMKGKEV
LASYDVTARRSQGTSTSGHPTIHITYELPGVQVGQGERLALFAPGKGSQYPTPLRGGGAR
FTRPTVNADIRGSVTMHDATADEYKQTMVEIRQGAETFTSPVQPDGSYEIAMPSPSGTME
INVIPPAGFVTPEPKTWEAAEGLAAPDFDVYPITVSGSLIDDSGTPVQGAPVTIAGRTAT
TDQYGNFTVNKVPAGTYDVVFGDTTTTHERTVSGVVVSDKRDNWIGQHTTAAKSQFGTVS
GRVTDPDGNGLAGVTVTAGGKTATTNADGVYSIADVPTGSVSVAVDAATVPDGYSVDGPL
DRNVTTSGVSGVKFSTTRETGAVSGRVTDPDGNGVAGVTVSAGDLSARTDADGDYSIAGV
PTGSVSVEVTDGVPAGYSVSGAQQENLTTAGVTDVDFSTMRETGTVSGRVTGPGSTGVAG
VTVKAGTATATTDANGMYSIPGVPTGTTTIEVTALPSRYVLPTSQQRNVTVNGVQNVDFP
LELKPTPTPTPKPTTSAPTPTPTPEPTTSAPAPKPSPTTSAQPTTPKPSPTTTAQPTTSA
PAPKPSPTTSAQPTTSKPSPTTSAQPTTLKPTPTSTTPKPSPTPAPAPPSTQPPAPTVGS
VAGKVADPAGKPVPGATVTARDARGKTHSVPVAANGKFQLTDLPPGDYTVTVGVPTGHVA
PPPANVTVKAGQQVQLPGFVVNPEKPKARFDWDRVVVKPGQTQVTAPTRTGDTTTPPNFR
TSTVTQVKPDGTTTELPAEESWITVEGDGTVVARPPRDAEPGEYRVEVRGDSGETHTITV
EVDEPTPMAQQHEVRFPLIPVPAGSTRQAGRPRATVTDGPFVYVDRRLPEGTRFEVGPAY
ADWVRADNNGRLTFTPPKDAAPGIREIPVKVTFPDGTSRTYTAEVEIGDPLLAHTTELGY
EEGLSVRPGEGITVLRTGAAVLPEGTTFEVDRSQPLGDWVAIVDEHTGNLRVFAPQQGEV
KVPVIAYFADGSSAELTASVRVSTSSALSAAHSPSYADVSAAPGGTATVKLSGSVPAGTT
FAVVDGGGLRNVGVDRRTGSLKIKLPADAQLDTPYTVTVRVRYADGSTEEITAQVTAASD
AARFTPRVAGVTAEVGEAATVRTGLNHNAKLAEFDHDGWQVFYDRATGELTAKPNSDVPV
GTVLKVPMKVTFPDGSTKIVEYAFTATDTPAPAVKQNRTSSGSSDGSSIGSSAGSSDGSS
ASGGWIAVVLGLLAMIAGVGYAAFLNQDAIRAQLKHYGF
NT seq
4080 nt
NT seq
+upstream
nt +downstream
nt
atgtctctgcccggtaaagattgcgtgcgtgcaaagcgaatcaccgcagtagctacagtg
ttggcgctcgcgggcggtgccgcggaaattccgcttggccccgtcgggtcggtcgcgcac
gcgcagatcgcgccaacgcagcagccgggcatcgacaacggcaccgtgcggaccgccgga
cgcgattgggaagcgtccgtgtttttcctcacgggcatgacggtgcggacggtgagcatc
gactttgtgccggcagacagcaccaatccgagggaagaggctccagccgacgacccagtg
ttcacgcgcatccccgaaatcgccgattaccgcgtggaccacatgaagggcaaagaggtc
ctcgcctcctacgacgttacggcgcgccgcagccaagggacctccacgtcggggcatccg
accatccacatcacgtatgagctcccaggagtgcaggttggccagggcgagcgactggcc
ctcttcgcgccgggtaaaggcagtcagtaccccacgcctttgcgtggcggcggtgcgcgg
tttactcgccccaccgtcaatgcagacatccgcggttcagtaaccatgcacgacgcaacc
gcggatgagtacaagcagacgatggtggagatccgccagggtgccgagaccttcacctct
ccagtgcaacccgacggttcctacgagattgcgatgccgtcgccctccggcacgatggaa
atcaacgtgattccaccggccggttttgttaccccggagccaaagacgtgggaggctgct
gagggcctcgccgcccccgacttcgatgtctacccgatcaccgtgagcggttcgcttatc
gacgactccggtacccccgtgcaaggcgcccccgtgacgattgccggccgcaccgcgact
acggatcagtacggcaacttcaccgtgaacaaggttccggctggcacgtacgacgtggtg
ttcggcgacaccacgacgacgcacgagagaacagtctccggtgttgtggtgagcgacaag
cgcgacaactggattgggcagcacacgactgccgcgaagtcgcagttcggcaccgtgtct
ggtcgtgtgactgatccggatggcaatggtcttgcgggggtgacggtgactgccggcggc
aagacggctactactaatgccgacggtgtctactcgattgctgatgtgccgactggttcg
gtgtcggttgcggttgatgccgccaccgtgccggatgggtactcggttgatggcccgctt
gatcgcaatgtgacgacgtctggcgtgtctggtgtgaaattctccacgacgcgtgagacc
ggcgccgtgtctggtcgtgtgactgatccggatggcaatggtgttgcgggtgtgacggtg
agcgctggcgatctgtcggcgcggaccgatgctgatggtgactattcgattgctggtgtg
ccgactggttcggtgtcggttgaggtgactgatggtgtaccggccgggtactcggtttct
ggtgcgcagcaggagaatctcacgacggcgggcgtgacggacgtggatttctccacgatg
cgtgagaccggcaccgtgtctggtcgtgtgaccggtccgggcagcacaggcgttgccgga
gtaactgtcaaggccggcacagcaacggcgacgacggacgctaacggcatgtactcgatt
cctggggtgcccacgggcacgaccaccatcgaggtcacagcgttgccttcgcggtatgta
ctgcctacgtcgcagcagcggaacgtgacggtcaatggggtccaaaacgtcgactttcct
ctcgagctaaagccgaccccgacgccgactccgaaaccgacgacttctgcacccaccccg
acgccgacacccgaaccgacgacttcagcaccggcaccgaagccgtcgcccacgacgtct
gctcagccgacgactccgaagccgtcgccgacgacgactgcccagccgacgacttcagca
ccggcaccgaagccgtcgcccacgacgtctgctcagccgacgacctcgaagccgtcgccc
acgacgtctgctcagcccacgacgctgaaaccgacaccgacgtccactacacctaaacca
tcgccgactccggcccctgccccgccgtcgacgcagccgccggcgccgacggtcggctcc
gtggccggcaaagtcgccgaccccgcaggcaagccggtgccgggcgcgactgtcacggcg
cgcgacgcgcgtggcaagacccactccgttccggtcgccgcgaacgggaagttccagctc
accgacctgccaccgggcgactacacggtcaccgtcggcgtacccacaggccacgtcgcc
ccgccgcccgccaacgtgaccgtaaaggcggggcagcaggtccagctgcccggcttcgta
gtcaacccggaaaagccgaaggcgcggttcgattgggaccgtgtggtggtcaaacccggc
cagacccaggtcaccgcaccaactcgtactggcgacaccacaacaccgccgaacttccgc
accagcactgtcacgcaggttaagccggacggcaccaccactgagctcccggcggaggag
agctggattacggtggagggcgacggcacggttgtcgctaggccgccgcgcgatgccgaa
ccgggcgagtaccgcgtcgaggtgcggggcgactcgggcgagacccacacaattaccgtc
gaggtggatgagccaaccccgatggcgcagcagcacgaggtgcgtttcccgctgattccg
gtgccggcagggtcgacgcgtcaggctggccgtccgcgcgcgactgttaccgacggtccg
ttcgtgtacgtcgatcgccgcctgccagaaggcacccgcttcgaggtggggccggcctac
gcggactgggttcgcgccgataacaacggccgtctcaccttcaccccgccgaaggacgcg
gcacccggcatccgggaaattccggtgaaggtgacgttcccggacggtacgtcccgcacc
tacaccgctgaggtggagatcggcgatccgcttctcgcacacaccaccgagctgggctac
gaggagggcttgtcggtgcgtcccggcgagggcatcactgtgttgcgcaccggcgccgcg
gtgttgccggagggcaccacgttcgaggtggatcgctcgcagccgctgggcgattgggtc
gccatcgtggacgagcacaccggcaacctgcgcgttttcgcgccgcagcagggtgaggtg
aaggtgccggtcatcgcgtacttcgccgacgggtcgtccgcagaacttactgcgagcgtt
cgcgtatcgacgagctccgccctctccgccgcccattccccctcgtacgccgatgtgtcg
gcagcgcctggcggcaccgcgaccgtgaagctgagcggttccgtgccggctggcaccacg
tttgctgtggttgatggtggggggctgcggaacgtgggcgtcgataggcgaactggctcg
ctgaaaatcaagcttcccgccgacgcgcaactggacaccccctacacggtgacggtgcgc
gtgcgctacgcggacggcagcaccgaggagatcaccgcgcaggtcacggcggcctcggac
gcggcgcgcttcaccccgcgagtggctggggtgaccgctgaagtcggcgaagccgcgacc
gtgcgcaccgggctcaaccacaacgccaagctggcggagttcgaccatgacggctggcaa
gtgttctacgaccgggctaccggcgagctcaccgcgaaaccgaacagcgacgtgccggtg
ggcaccgtgctgaaggtgccgatgaaggtgacgttcccggacggctcgacgaagattgtg
gagtacgcgtttaccgccaccgacacgcccgccccggcggtaaagcagaaccggacgtcc
tcgggttcgtccgacggctcgtccatcggttcgtcggccggatcgtcggacggctcgtcg
gcctccggaggatggatcgcggtggtgctcggcctgctcgcgatgatcgcgggtgtgggg
tacgcggccttcctcaatcaggacgccattcgggcgcaactgaagcactacggattttag
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