Catenulispora acidiphila: Caci_3519
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Entry
Caci_3519 CDS
T00967
Name
(GenBank) YD repeat protein
Organism
cai
Catenulispora acidiphila
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF6531
T7SS_signal
WXG100
RHS
OCRE
Motif
Other DBs
NCBI-ProteinID:
ACU72425
UniProt:
C7QAC6
LinkDB
All DBs
Position
complement(3925688..3930214)
Genome browser
AA seq
1508 aa
AA seq
DB search
MARPTGWDVLGLDGDPTPGVVESVQALAKEFGDFAHDVEAAYHSLNSFGSDATALTWVGQ
TADAFKGKYGPLPGRLQKLYTSYSEASDALSAYAPLLQAAQTKADAALRQAQDAHADLQR
ATTNANTAATDLKTAQQNHATTPNPQAVTDAQTAHDTAQTNLNNAKAHMASLTKQANDAY
NDRINAAKTCGSALHHAQSDGIHNKSWWQHVGEDLSKWGGEIGKIAGELAPILDIIALAT
SWIPGVDVVTAAIAEADNIIAIAGTAVGAIGDAMQGHWGDALLGAGMVALTFVGGRALGS
GAEDLEGEAGALEGEAGALEGEGGALGDAAEGGGADVPTGEGESPGGVGDDALEGDGVSN
ANTGGDPVDLVSGQMVALETDLELPGVLPIVLRRAYASGYRTGRLFGPGWSSTLDQRLSV
NAAGIHLAGDDGQTLHYPLPAGEEEVLPSRGARWPLIWDRAADEIRVTDPRSGLIRHFPV
VHFGSPDGQIRDVVRISDRNANRIDIVRDPEGTPTGVEHNGYRLAIDAVATTNGPRVAAI
RLLDGSEQGVVVKRYEYDEHGRLTGVVNSSGMPYTYQWDDFHRITAWVDRSGFRYSYEYD
TNGRVVRGVGADGYLSGDFAYDPAARTTVFTDSLNRAKTYHYDLNGHLDRAVEASGAALV
FLDDAYGRRLRGTDRRGMTTVFDRDAAGNTIRVQRPDGTTLSAEFNALNSPTSVVQADGT
CWRQEHDAAGNVIVQLDPLDARTEFGYDSLGALVSITDDAGDRTAYEVDAAGQTVSVTGP
DGSVHRIERDAFGRVVAVTAPDGGVTRYAWSVEGGLRSRVRPDGSREAWETDADGNLVAY
TDQLGAVTRYEVGPFGKVAARIEADATRFEYRYDTEMQVVSVTGPGQVQWSYTYDQSGNL
VQETDYNDRSLAYSYDADGWLAESVDALGQRMVFQRDPLGRVVGRQTVDAEYTYGYDANG
RMLSASGAGSRLEFAYDAVGRVVAETIDGRTTRSGYDALGRRVARVTPAGAESSWRYDAT
GRAVVFAAGDVEQHIGYDLGGREVSRALGIGGAVLSRAFDAAGRIATERIATERIATERI
DPSLSRSYAYHADGVPAAVTDSLRGTQEYIADPRGRISEVRGPHGGGESYSYDGFGNIVQ
AASALSTDSIGGRDVRGTRVLRAGHVHYDYDAAGRVVRIRKQTLSGQVRIQTFAWDADGR
LKQAVLPDGSAWHYRYDPLGRRLAKQHVLADGTEAERVEFAWDGPRLIEQHSLDAAGRTT
TVTWDYDPDTGLPVAQRRRSWAAEAAQERVDEMFHAIVTNLVGMPTELVTPDGRVAWYQN
TDLYGQSVAVATGGDPDLECPLRFAGQYFDAETGLHYNVQRYYDPAIAAYLTPDPLGLAP
ALNDHAYVPNPLTMVDPLGLASGARVPSPPFSAGGYSTPGNNQELNVDDMLKAGEDWLGP
GYGEPKAGSGRFVSSDGSRVFRMGDSDILGKHGGGPHCNFEYMEPDPKTGRMSVTQNDHV
YFTNGCIQ
NT seq
4527 nt
NT seq
+upstream
nt +downstream
nt
atggcacgtccaacggggtgggatgttctggggttggatggggatccgacacctggtgtg
gtggaatcggtgcaggcgttggcgaaggagttcggggacttcgcccacgatgtggaagcg
gcgtatcacagcctgaactcgttcggttcggatgcgacggcgctgacgtgggtgggtcag
actgctgatgcgttcaagggcaaatacggtccgctgcccggtcgtctacagaagctgtac
acctcgtacagcgaagcctctgatgcgttgtcggcgtatgcgccgctgcttcaggccgca
cagaccaaagccgacgccgccttgcgtcaagctcaagacgcgcatgctgatctgcagcgt
gccaccaccaacgccaacaccgcagcgacggatctgaagaccgcgcagcagaaccacgcc
acaacccctaacccccaagcggtcaccgacgcgcagaccgcgcatgacaccgcacagacc
aacctgaacaacgccaaggcgcatatggcgtcgttgaccaagcaagccaacgacgcctac
aacgaccgcatcaacgccgccaaaacctgtggcagtgccctgcatcacgcccaatccgac
ggcatccacaacaagtcctggtggcagcacgtcggcgaggacctgtccaagtggggcggc
gagatcggcaaaatcgccggcgagctcgccccgatcctggacatcatcgccttggcgacc
tcctggatccccggtgtcgacgtcgtcacggcagccatcgccgaagccgacaacatcatc
gccatcgccggcacggccgtcggcgctatcggggacgccatgcaagggcactggggcgat
gcgctgctcggcgccggcatggtcgccctgaccttcgtcggcggccgagccctgggttcg
ggagccgaagacctcgaaggcgaagccggtgccctggaaggggaagccggcgctctcgaa
ggcgagggcggcgcgctcggcgacgcggcggagggcggcggagccgatgtaccgactggg
gagggcgaatcgcccggcggggtcggcgacgacgcgctcgaaggcgacggcgtcagcaac
gccaacaccggcggcgaccccgtggacctggtctcgggccagatggtcgcgctggagacg
gatctggaactgcccggcgtgctgccgatcgtgctgcgccgcgcctacgcctccggctac
cgcaccggacgcctgttcggtcccggctggtcctcgaccctcgaccagcggctgtcggtc
aacgccgcgggcatccacctcgccggcgacgacggtcagacgttgcactaccccctgccg
gccggtgaggaggaagtgcttccgtcccgaggcgcgcgctggccgctcatctgggaccgc
gccgcggacgagatccgtgtcaccgatcctcgcagcggcctgatacggcacttcccggtc
gtgcacttcgggagccccgacggccagatccgcgacgtcgtccgcatcagcgatcgcaac
gccaaccggatcgacatcgtgcgcgacccggaagggacgccgaccggtgtcgagcacaac
ggctaccggctcgccatcgacgccgtggcgaccacgaacggtccgcgcgtcgccgcgatc
cgcctcctggacggcagcgagcaaggcgtcgtcgtcaagcggtacgagtacgacgagcac
ggtcggctgaccggagtcgtcaactcctccgggatgccgtacacgtatcagtgggatgat
ttccaccggatcacggcgtgggtcgatcgttccggcttccgttactcctacgagtacgac
accaacggccgagtggtgcgcggcgtcggcgcagacggctatctgtcgggcgatttcgcc
tacgatccggctgcccgaacaacggtcttcacggactcgctcaaccgcgccaagacctat
cactacgacctgaatggccacctggatcgggccgtcgaggcgtccggcgccgctctggtc
ttcctcgacgacgcctacggccgccggctgcgcggcaccgaccggcgcgggatgacgacg
gtcttcgaccgcgacgcggccgggaacacgatccgcgtccagcgtccggacggcacgacg
ctcagcgcggaattcaatgccctgaattcccccacctcggtggtccaggccgacggcacg
tgctggcggcaggagcacgacgccgccgggaacgtcatcgtgcagctcgatccgctcgac
gcgcgcaccgagttcggctacgacagcctgggcgcgctggtgtcgatcaccgatgacgcc
ggcgaccgcaccgcctacgaggtcgacgcggcgggacagactgtctcggtgaccgggccc
gacggctcggtgcaccggatcgagcgcgacgcgttcggccgggtcgtcgccgtgacggcg
ccggacggcggcgtgacgcggtatgcatggagcgtcgagggcgggctgcgctcccgtgtc
aggcccgacggttcgcgggaggcgtgggagaccgacgccgacgggaacctcgtggcgtat
accgaccagctcggcgccgtcacgcgctacgaagtcggtccgttcggcaaggtggcggcg
cggatcgaggccgacgccacccggttcgagtaccggtacgacaccgagatgcaggtggtg
tcggtcaccggtcccgggcaggtccagtggtcctacacctacgaccagagcgggaatctg
gtccaggagacggattacaacgaccgcagcctcgcctactcctatgacgcggacggctgg
ctcgccgagtccgtcgacgcgctcggtcagcggatggtcttccagcgcgacccgttgggc
cgggtcgtcgggcggcagaccgtggacgccgaatacacctacggctacgacgcgaacggc
cggatgctgtccgcctccggcgccggttcgcggctcgaattcgcctacgacgccgtcggc
agggtggtggcggagacgatcgacggccgtacgacacgctccggatacgacgccctggga
cggcgcgtcgcccgcgtcactccggccggcgccgagtcgtcgtggcggtacgacgccacg
ggtcgcgccgtggtcttcgccgcgggtgacgtcgagcagcacatcgggtacgacctcggc
ggtcgggaagtcagccgggcgctggggatcgggggcgcggtgttgtcccgcgccttcgac
gccgccggtcggatcgccacggagcggatcgccaccgaacggatcgccaccgaacggatc
gatccttctctgagccgctcctacgcctatcacgccgacggcgtcccggccgcggtgacc
gattccctgcgcgggacgcaggagtacatcgccgacccgcgaggaaggatctccgaggtc
cggggtccgcacggcggcggcgagtcgtactcctacgacggattcggcaacatcgtgcag
gccgccagtgcgctgtcgaccgacagcatcggcggtcgcgacgtacgcggcacgcgtgtg
cttcgcgcggggcacgtccactacgactacgacgcggccgggcgggtcgtccggatccgc
aagcagacgctgtccggccaggtccgcatccagaccttcgcctgggacgccgacggccgg
ctcaagcaagccgtcctgcccgacggctcggcgtggcactaccgctacgatccgctcggc
cggcgcctcgccaagcagcacgtcctggccgacggcaccgaggccgagcgtgtcgagttc
gcctgggacggaccgcgcctgatcgagcagcacagcctcgacgccgcgggccggacgacc
acggtgacgtgggactacgacccggacaccggactgccggtggcgcagcggcggcggtcg
tgggcggcggaggccgcgcaggagcgggtcgatgagatgttccacgcgatcgtcaccaac
ttggtcggcatgcccaccgagctcgtcacccccgacggccgggtcgcgtggtatcagaac
accgatttgtacgggcagtccgtcgccgtggcgaccggcggcgacccagacctcgaatgc
ccgctgcgcttcgccgggcagtacttcgacgccgagaccggcctgcactacaacgtgcag
cggtactacgacccggcgatcgcggcgtatctgacccctgacccgctgggcttggcgccg
gcgctcaacgaccacgcctacgtcccgaacccgctgaccatggtcgacccgctcggtctg
gcctccggcgcgcgcgtcccgtcgccgccgttctccgccggcgggtacagcacgcccggc
aacaaccaggaactcaacgtcgacgacatgctcaaggccggcgaggactggctcggcccg
ggctacggcgagccgaaggcgggcagcggacgcttcgtgtcgtcggacggcagccgcgtc
ttccgcatgggcgacagcgatatcctcggcaaacacggcggcggcccgcactgcaacttc
gaatacatggaaccggaccccaagaccggcaggatgtcggtcacccagaacgaccacgtc
tacttcacaaacggatgcatccaatga
DBGET
integrated database retrieval system
