Candida albicans: CAALFM_C109830WA
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Entry
CAALFM_C109830WA CDS
T00189
Symbol
SKI3, CaO19.4848
Name
(RefSeq) SKI complex subunit tetratricopeptide repeat protein
KO
K12600
superkiller protein 3
Organism
cal
Candida albicans
Pathway
cal03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CAALFM_C109830WA (SKI3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cal03019
]
CAALFM_C109830WA (SKI3)
Messenger RNA biogenesis [BR:
cal03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
CAALFM_C109830WA (SKI3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_19
TPR_2
TPR_1
TPR_22
TPR_14
TPR_8
TPR_12
TPR_16
TPR_11
TPR_17
TPR_6
ANAPC3
TPR_9
TPR_7
TPR_10
NatA_aux_su
TPR_15
TPR-S
Motif
Other DBs
NCBI-GeneID:
3634847
NCBI-ProteinID:
XP_723534
UniProt:
Q5APB7
LinkDB
All DBs
Position
1:2149689..2153891
Genome browser
AA seq
1400 aa
AA seq
DB search
MSSIKKYLKSAKASIEANDPESTLDFANDALEEDPNCYFAYVFKGKAYQLLRDIPKAIKA
FQKATEIEPNNLLAWKGYFQVLKVSDDYKLFFQVLTNLVRLLTDQGISIAETLKDMRNYL
DRQKYKSNDNLYEFYLRSILPGSELGDLIGTAIEPTDVTVKKLLDFKTSQTEKTVVNRVS
KERVKFGRVITTDQKAKLDNIAWSYYEDGDILELYEMFLNVCDDEELRHKYEEKLLKFKY
ELLKVCPDKQAMHQDIKNQMEDMILINTKSLFCWNLYFDWCDAKTINDLDENKVISYLQI
FQNEGLGLILFAYVMSDISPFSKEKIVKSLSAYDINKRKPDSSQLNPEDDKDAELLEELA
DDATLEDETSSSQYYLPQDEVLGLILEGYSKTKNSVLASRIIVNYYIHLREYNLASEKCR
DGIKTLADIQRTFGIDLTNTKEDFLCSLAIVYTYYEAPKNYNRAIQLYEKILESNPDNVK
AQVGKGLIYVERGELEEARTILGAVVKKYPTNIEAESEYYWCLVKLGEYSQGRKGLEGFL
SKITGGDLHSRETRAVARWRIAKSYFLENADNNDNVKECYNNLIKSLKDSDLYAPSYTLL
GILFQDYYGDTERAQKCFYKAFDLDTNEIVAARYLVQQATSKNEWEVAQVLAKRVVSNES
SRRLIMRGDVDTDKAWPYRVLGSGALNSQDDAKAVEWFQNALRLDANDFDCWVGLGEAYY
HCGRFDAAAKVFRHALTLKNNDWVVKYMLGVVMCEMKEYNEGLTNLYEALEMRPSEECIL
SAIYEANIQNCQRFIQSGFFGRAINANLKALSFIKQSLSQNSTSQKAWKSLGEVLKVFTR
IQQNINQVPFNDVFDIFESLGYNETVSSVADIDLDESINLKNAQELYAQGEKAQSLFVLI
IVAAVAGVKSLSLKANKLLRATAYYNLGLALLEAYQNDDQMSVYRDTSILFFKKSIQLEQ
SNANYWIALGNAYFTSNPQISQHCYIKATTLEVKDAEIWVNLASLFLRYGDTELSKDTFL
RAQSVAPQDAQSWLGHAVAADILGEENKASGYYVHAFTLSKGRLALAQFLYGLSVVNKSQ
GRDPRDIETAQEFSISNQAMQQYLKYYPDDEAGLSIALSIAERCKDFESAIALGTKLSEL
YERQYEANESEVVLQKFATVKSQLARIHLGLGDYEQALDNAQMALQLNETSEILLSSKIT
MGLSYFFLNDFSSALEELKVVLGEYSDSSRIVSLIAQVLHAHGTEETKQAAVDQLFAFIE
EYGSSLLVVLTLGAISLVDQLDDYLPAIKEELSTLGLNEIVCDTHREVPRLLNEINTRLD
DGNNENAWLRYAFLFPFDYNIWKNINSTMAKQVISLHDVKVNGVQYSDALLKTGQLRDIQ
RSLLFNPGNNEAIKALHGCL
NT seq
4203 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgatcaaaaagtaccttaaatctgctaaagcatctatagaagcaaatgatcct
gaatcaacactagattttgccaacgacgctttagaagaagatccaaattgttattttgca
tatgtatttaaaggaaaagcatatcaattgcttagagacattccaaaggcaatcaaggca
tttcaaaaggcaacagagattgaaccaaataatttattggcctggaaaggatattttcaa
gtccttaaagtgtctgatgactacaaattgttcttccaagttttgaccaatttagtgaga
cttttaacagatcaagggatctcaatagcggaaacattgaaagatatgagaaactatttg
gatcgccaaaagtacaagagtaatgacaatttatatgaattttatttgaggtcaatacta
ccaggatctgaattgggtgacttgattggaacagccatcgaacctactgatgttacagtg
aaaaaattgttagattttaagactagtcaaactgaaaaaactgttgtcaatagagtttcc
aaagaaagagttaaatttggtagggttataactactgatcaaaaggcaaaacttgataac
attgcttggtcttattatgaggacggtgatattctcgagttgtacgaaatgtttctcaat
gtgtgtgacgatgaagagttgagacacaagtacgaagagaaattgttaaagttcaagtac
gaactcttgaaggtatgtcctgataaacaagcaatgcatcaagatatcaaaaaccaaatg
gaagatatgattcttatcaatactaaaagcttgttttgttggaatttgtatttcgattgg
tgtgatgcaaagacaatcaatgatcttgatgaaaataaggtgatatcttacttgcaaatc
tttcaaaatgagggtttggggttgattttgtttgcctatgtcatgagtgatatttctcca
tttagtaaagagaaaatcgtgaaaagtttatcggcatacgacatcaacaaacggaagcct
gattcatcgcagttgaatcctgaagatgacaaggatgcagaacttttagaagagcttgcg
gatgatgccactttggaagacgaaacttcttcatctcaatattatttaccccaagatgaa
gttttgggtttgattttagaaggttatagtaaaacgaaaaattcagtgttggccagcaga
ataattgttaattactatattcatttgcgagaatataacttggcttcggaaaaatgtcgt
gatggtattaaaactttagctgatattcagcggacttttgggatagatttgacaaatacc
aaggaggactttttgtgttcacttgcaattgtgtacacttattatgaagctcccaaaaac
tataaccgagcaattcagctttatgagaaaattttagagtcaaatccagataatgttaaa
gcacaagtgggtaaaggattgatatatgtcgagagaggggaattagaggaagctagaact
attttaggagctgttgttaagaaatatcctacgaatattgaggctgaatcagagtattat
tggtgtttagtcaagttgggagaatactcacaagggcgaaagggtttggaaggctttttg
agtaagatcactggtggtgatttacacagtcgtgaaactagagctgttgctcgttggaga
attgcaaaaagttattttttggaaaatgccgacaacaatgacaatgttaaagagtgctac
aataacttgatcaaatcacttaaggattctgatttgtatgcaccttcatacactttgctt
ggtattttgtttcaagactattatggcgacactgaaagagcacaaaagtgtttttacaaa
gcgtttgatctagacacaaacgagattgtggcagcaaggtatttggtccaacaagcgact
ctgaagaatgaatgggaagttgcgcaagtattagccaaaagagtcgtgagcaacgaaagt
tcaagaagattgataatgcgtggtgatgtggatacagataaagcatggccttatcgtgtg
ctaggtagtggtgccttaaattctcaagatgatgcaaaggctgtcgaatggtttcaaaac
gcactccgtttagatgctaacgattttgactgttgggtaggcttaggtgaagcatactac
cattgtggacggttcgatgctgcagctaaagttttccgtcatgcattgacattgaaaaat
aatgactgggtagtcaagtacatgttgggagtggtcatgtgtgaaatgaaagaatacaat
gaagggttgaccaatttatatgaagccttagaaatgagacctagtgaagaatgtattctc
agtgcaatttatgaagcaaacatacaaaactgtcaacgttttattcaatcagggtttttc
ggaagagcaatcaacgcgaatttgaaagcattatcttttataaaacagtctctctcccaa
aattcaacttcgcaaaaggcgtggaagtcattaggtgaggtgttaaaggtgttcactaga
attcaacaaaatattaatcaagttcctttcaatgatgtgtttgatatttttgaaagttta
ggatataatgaaactgtatctctggttgctgatatcgatcttgatgaatcaattaatttg
aaaaatgctcaagaattgtatgctcaaggtgagaaggctcagtccttgtttgtattgata
attgttgctgctgtcgcaggtgtaaaatctttatcgttgaaagctaacaagttgttacgt
gcgacagcgtactacaatttgggtttggccttgttagaggcttaccaaaatgacgaccaa
atgctggtttacagggacacatctattttgtttttcaaaaaatctattcaacttgaacaa
agcaatgctaactattggattgcattaggtaatgcttattttacgtctaatccacaaata
tcacaacactgttatatcaaagctactactttggaggtgaaagatgctgaaatatgggta
aatttggcatcattatttttaagatatggagacaccgaattatcgaaggatacgttttta
agagctcaatcggtggcccctcaagatgctcaatcatggttaggacatgcagttgctgcg
gatatattgggtgaagaaaacaaggcatcgggttattatgttcatgcatttacattatct
aaaggtcgtttagcgttagcacaatttctttatggattatcggtggtaaataaaagccaa
ggtcgggatcctagagatattgaaactgctcaagaatttagcattagtaatcaagcaatg
caacaatatctcaaatattatcctgatgatgaggctggattaagtattgcgttatcgatt
gctgaaaggtgtaaagatttcgagctggcaatcgctttaggaactaaattaagtgaactt
tatgagaggcaatatgaggcaaatgaaagtgaggttgttttacaaaaatttgcaactgtg
aaatctcaattagctagaattcacttgggtttgggtgattatgaacaagctttagacaat
gcacaaatggctttacaattgaatgaaacttcagagatcttgttatcttcgaaaattact
atggggctcagctatttcttcctaaatgatttcctgagcgctctagaagaattgaaagtt
gttcttggagaatacagtgattcttcgagaattgttagtttgattgctcaagtcttgcat
gcgcatggaactgaggagactaaacaggccgctgttgatcaattgtttgccttcattgaa
gaatatggatcttcattattagttgtcctcactttgggtgcaatttctcttgtggatcaa
ttggatgattatttgccggcgattaaggaagagttgtcaactcttggattaaatgaaatt
gtttgtgacacccacagagaagttcctcgattattgaatgaaataaatactagacttgat
gatggtaataatgaaaatgcttggcttagatatgcatttttgttcccatttgattataac
atctggaagaacattaatagtacaatggctaaacaagtgatttctttgcatgatgtcaag
gttaatggggtacagtattccgatgcattattaaagactggtcaattgagagatattcaa
cgtagcttactattcaatcctggtaacaatgaagctataaaggcgttgcatgggtgttta
tga
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integrated database retrieval system
