Calothrix sp. NIES-2098: NIES2098_03370
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Entry
NIES2098_03370 CDS
T08374
Symbol
trpB
Name
(GenBank) tryptophan synthase beta subunit
KO
K01696
tryptophan synthase beta chain [EC:
4.2.1.20
]
Organism
caln
Calothrix sp. NIES-2098
Pathway
caln00260
Glycine, serine and threonine metabolism
caln00400
Phenylalanine, tyrosine and tryptophan biosynthesis
caln01100
Metabolic pathways
caln01110
Biosynthesis of secondary metabolites
caln01230
Biosynthesis of amino acids
Module
caln_M00023
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:
caln00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
NIES2098_03370 (trpB)
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
NIES2098_03370 (trpB)
Enzymes [BR:
caln01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.20 tryptophan synthase
NIES2098_03370 (trpB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PALP
DUF3708
DUF1971
Motif
Other DBs
NCBI-ProteinID:
BAY07222
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All DBs
Position
439145..440386
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AA seq
413 aa
AA seq
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MTTTPISPSSPSTAQVPDTQGRFGRFGGKYVPETLMPALAELETAYQQYRHDPDFLTELQ
QLLRDYVGRATPLYFAERLTAHYARPDGTGPQIYLKREDLNHTGAHKINNALGQVLLAKR
MGKQRIIAETGAGQHGVATATVCARFGLECIIYMGVHDMERQALNVFRMKLMGAEVRPVA
AGTGTLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGQETRAQAQEKW
GGLPDILLACVGGGSNAMGLFYEFVNEPSVRLIGIEAAGEGVNTNKHAATLTKGQVGVLH
GAMSYLLQDQDGQVIEAHSISAGLDYPGVGPEHSYLKDTARAEYYSVTDEEALAAFQKLS
RLEGIIPALETSHAIAYLETLCPQLTGSPRIVINCSGRGDKDVQTVAKFLNPA
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
gtgactaccacacccatctctccaagttccccatctactgctcaggttcccgatacacaa
ggacgctttggacgctttggcggtaagtacgtcccggaaacattgatgcctgcgcttgct
gaactagaaacagcttatcagcaatatcgccatgaccctgattttctaacagaactgcaa
caactcctgcgagactatgtaggacgtgcgacgccattgtattttgcggaacgtctgact
gctcactatgctcgcccagatggtactgggccgcaaatttatttaaaacgtgaagactta
aatcacactggcgctcacaaaattaataatgccctaggtcaagtgttgttggcaaagcgc
atgggcaagcagcgaattattgccgaaactggcgctggacaacatggagtagctacagct
acagtatgcgctcgttttgggctggaatgcatcatttatatgggcgtccacgatatggaa
cgccaagctttgaatgtgttccggatgaaattaatgggagcagaagtgcgtcctgtagct
gcgggaacgggaactctcaaggatgcgacgtctgaagctatccgagattgggttacaaat
gtggaaacaactcactatatcttgggttcagtagcagggccccatccttacccgatgatg
gtacgtgatttccatgcagtgattggacaagaaactcgcgctcaagcccaagaaaaatgg
ggcggtttgccggatattctcctggcttgtgtgggtggtggttccaatgcaatggggcta
ttctatgagtttgttaatgagccgtccgtgcggttaattggaattgaggcggcgggagaa
ggagttaatactaataaacacgctgccaccttgacaaaagggcaagttggtgtattgcac
ggagccatgagctatctgctgcaagaccaagatgggcaagtaattgaggcacattcaatt
agtgcggggttagattatcctggcgtcggcccggaacacagctatttaaaagatactgct
cgtgctgaatattacagcgtcaccgatgaagaggctttggcagcatttcaaaaattgtca
cggttagaaggtattatcccagcattggaaacatcccatgcgatcgcctatttagaaacc
ctgtgtcctcaacttactggtagtccccggattgtaattaactgctccgggcgcggcgat
aaggatgtccaaactgtggcgaagtttttaaatcctgcctag
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