Calothrix sp. NIES-2098: NIES2098_05480
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Entry
NIES2098_05480 CDS
T08374
Name
(GenBank) TPR repeat-containing protein
Organism
caln
Calothrix sp. NIES-2098
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_8
TPR_11
TPR_16
TPR_17
TPR_9
TPR_12
TPR_14
TPR_19
TPR_7
PPTA
TPR_6
TPR_10
BTAD
ANAPC3
TOM20_plant
T7SS_EccA1_N
TPR_15
Wzy_C_2
TPR-S
NatA_aux_su
nSTAND3
AAA_16
AAA_7
ResIII
DUF815
AAA
SRP54
NB-ARC
Motif
Other DBs
NCBI-ProteinID:
BAY07432
LinkDB
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Position
complement(660482..663202)
Genome browser
AA seq
906 aa
AA seq
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MEELNILEPMLNFYVDHKEFIDNLLSGGLPTILPAIVSFFWWLIWRQRQRRIPPEIFAFE
VIKPHSPDLMQQILGGDEKDPLADQNITYQKRVTHRSISQELQQLLEQYRWVLIVGRNGL
GKTREAAEVAKNLNQTGWTVLYLKPNEWLDVPARLPKVIGGDRKLLFFLDDLNQKMHRSH
EEISPEAEKSLVERFTVPLQQRLLDTLTKYESFCGKAEIRVIATARNEKLPDFPGEVNAW
DKLQWEKYPKLWQQFQIYELPEPEDRAIVGVLEATVPKTKISTQPEQYPELARRNDATFR
NVVENLQRLRNDGLPLNSNTYRESLGKTWENRYQESVQRYPASQYIYDAVDLLQQFNIPL
ERFIVEATAQMLAGGNFWQRLWYRCQINVALNFLIHAERILTPRDGQIEGKGKHVEAKEY
LLPFAKVILKLADRHPKQMQRLLLNFGVEMAVANYDREAIACWDKTIKIQPNYYPAWGNR
GIALSKLGRFAEAIASYDKVLEIKPDDYLGWYYRGNVLDEDGQHEQAIASYDKALALKPD
LHQAWNNRGIALRNLGRHQEALSSYNQALAIIPNLHQGWVNRGNALRNLGEFAEAVESYN
KALAIQPQDSYNWYSRGNCLKNLGKLEAAIASYDKALAIQPDDEVWYNRGHALGDLGRYE
DAVISYDQALALKPDKHEAWYNRGNILLHLERFEDAVKSYDLALAIKPNKDEAWNNRGNA
LFNLGRYEDAIKSYDQALLIQSDKPKAWKNRGNALFNLGRYEEAIKSYDQALLIQPDKHE
AWYNRGNALRNLGKYLEAIASYDQALLIKPDKHEAWNNRGLALTYLHRYHDAIASYDQAL
LIKPDKHEAYYNKACCYGLLGNADLAIENLQKVIKLHPDECREMAKTDSDFDPIREDQRF
LALIFQ
NT seq
2721 nt
NT seq
+upstream
nt +downstream
nt
atggaggaattaaacattctggagccaatgctcaacttttatgtagaccacaaggaattt
atcgacaatctgctttcaggtgggttgccgactattttacctgctattgttagtttcttt
tggtggttgatctggcgacaacgccaacggcgcattcccccagaaatttttgcttttgag
gtaattaagcctcacagtccagacttgatgcagcaaattttgggcggtgatgagaaagac
ccattggcagaccaaaatataacttaccaaaagcgggtgactcatcgcagcatcagccaa
gaattacagcagctgctagaacaataccgttgggtgttaattgtgggacgtaatggactg
ggaaaaacacgggaagcggctgaagtagcgaagaatcttaatcaaacaggctggacggta
ctttatctcaagccgaatgaatggttggatgtacctgcacggttgccaaaagtaattgga
ggcgatcgcaagttactatttttcttagatgacctcaatcaaaaaatgcaccgcagccac
gaggaaatctctccagaagcggaaaaaagtttggtggaacgctttacagttcctttacaa
caaaggctgctcgatacgttaactaaatacgagtctttctgcggtaaagcagaaattcgt
gtgattgctacagcacgtaatgaaaagctaccagactttcctggcgaagttaatgcttgg
gataaactgcaatgggagaaatatcctaaattgtggcagcaatttcaaatttatgaattg
ccagaaccagaagatcgggcaatagttggggtgttagaagcaactgttcccaaaaccaaa
atttctactcagccagaacagtatcctgaattggcgaggcgcaatgacgccacgttcaga
aatgtagtagaaaatctccaacgtctgcgcaacgatggcttacccttaaactccaacacg
taccgggagagtttagggaagacttgggaaaaccgctatcaagagtcagtacagcgatac
cctgcaagccagtatatctacgatgcggtggatttattgcagcaattcaacatccccctg
gaacgtttcatcgtcgaggcgacagcccaaatgttagcaggtgggaatttttggcaaagg
ctgtggtatcgttgccaaattaacgttgctctgaactttcttattcatgctgaacgcatt
ctgacacctagggatgggcaaatagagggcaagggtaaacacgtagaagccaaagaatat
ttgttgccctttgctaaggtaatcttaaaactagcggatcgacaccccaaacaaatgcag
cgcttactactcaattttggtgtagagatggcggtagcaaattacgatcgggaagctatt
gcttgctgggataaaacaatcaaaattcaacccaattattacccagcttggggtaatcgg
ggtatcgcactcagtaagctaggacgttttgcagaggcgatcgcatcttatgacaaggtg
ttagaaattaaaccggatgattacttaggttggtattaccgaggtaacgtcctagatgaa
gatggacaacacgaacaagcgatcgcatcttacgacaaagcactggctctcaaaccagac
ctacatcaagcttggaataatcgaggaattgcgctgcgaaatttaggacgacatcaagag
gcgttgtcatcttacaatcaagcactggcaattatccccaacttgcatcaaggttgggtt
aaccgaggcaatgctctgcggaatttaggggaatttgcagaggcggtagaatcctataat
aaagcactcgctattcaaccccaggatagttacaactggtacagtcgcggtaattgcctc
aagaacttgggtaaattagaagctgcgatcgcatcttatgacaaagcactcgctattcaa
cctgatgatgaagtttggtataaccggggtcatgcccttggcgatctaggaaggtatgag
gatgctgtaatatcctatgaccaagcacttgcgctcaaaccggataaacacgaagcttgg
tacaatcgcggtaatatactattgcatttagaacgctttgaagatgcggtaaaatcctac
gatctagcattggcaatcaaaccaaataaggacgaagcttggaataatcggggtaatgcc
ctgtttaacttgggaaggtatgaagatgcgataaaatcttacgaccaagctttattaatt
caatcagacaaacctaaagcttggaaaaatcgcggcaatgccttatttaatttgggaaga
tatgaagaggcaataaaatcttacgaccaagctttattaattcagccagacaaacacgaa
gcttggtacaaccgaggtaatgctttacgtaacttaggcaaatatttagaagcgatcgca
tcctacgaccaagcgctattaattaaaccagacaaacacgaagcctggaataaccgagga
ttagcactgacgtacttacaccgataccatgatgcgatcgcatcctacgaccaagcgcta
ttaattaaaccagacaaacacgaagcctattacaacaaagcttgttgttatggcttacta
ggaaacgcagatttagcaattgaaaacttacaaaaagttatcaaacttcatcctgatgaa
tgtcgcgagatggcaaaaactgactctgatttcgacccaattagagaagatcaacgcttt
ttggcattaatcttccagtga
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