Calothrix sp. PCC 6303: Cal6303_5258
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Entry
Cal6303_5258 CDS
T02372
Name
(GenBank) RNA polymerase sigma factor, sigma-70 family
Organism
calt
Calothrix sp. PCC 6303
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
Sigma70_r2
Phage_antitermQ
DUF2089
HTH_23
LCIB_C_CA
Motif
Other DBs
NCBI-ProteinID:
AFZ04144
UniProt:
K9V8X8
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Position
6335732..6336946
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AA seq
404 aa
AA seq
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MLVCVMHPRKNLIETFSSFIQFDGDRFQSWAVDGKLRRSMQGVLTKSPEDGAENIWAIYW
YRMWLSREIPDLAKGHLSAYLQESCFWSASKTAGTFSNTQYKLPDCFQIAIAQLNQILKS
FNPNQGSTLKSYASAIFGTVIRETLRQRHEIDICTTWGILRKVSQKRLVEALEAAGLSAD
AVESHVIAWNCFKLLYSPNPNNTTRKLNRPDDSTWNAIALSYNSQTKATAIPQEIENLLL
NAAKATRQYLYPTVTSINATVGSGDTYEILDNIPSNEQESLLTEIIAAEEQENRNSQLTT
MQQILIETINQLEPQAQKILQLYYAEGEIQQNIAKILEIPQYTVSRRLTKVRENLLKTLI
QWSQQHLHISVTPDLLKNTNAIMEEWLQAYYSAKRYGTSNSLSP
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgttggtttgcgtaatgcacccccgcaaaaatcttattgaaaccttttctagctttatc
cagtttgacggcgatcgcttccagtcgtgggcggttgatggtaaactacgtcgcagtatg
caaggtgtgcttacaaagtcacctgaagatggtgctgaaaatatttgggcgatttactgg
tatcgaatgtggctgtctcgtgagattcccgatttagcgaagggacatttaagtgcttat
ttgcaagaatcttgtttttggagtgcgagtaaaactgcggggacttttagtaatacccag
tataagctacccgattgttttcagattgcgatcgcacaacttaatcagatactgaaaagc
tttaatccaaatcaaggttcgactctcaaaagctatgctagcgcaatttttggtacggta
attcgggaaaccctgcgtcaacgtcacgaaattgatatttgtaccacttggggaatctta
cggaaagttagtcaaaaaagactagttgaagctttagaagctgcgggtttatctgctgat
gctgtggaatcccatgtgattgcttggaattgcttcaaattactctattcaccaaatccc
aataacaccacccgcaaacttaaccgtcctgatgattctacatggaatgcgatcgcactc
agttacaattcccagactaaagcgactgcaattccccaagaaattgaaaatctgttgcta
aatgctgcaaaagccacacgtcagtatttatatcctacagtgacatctatcaatgccacc
gtaggtagtggagatacttacgaaattctcgacaatattcccagtaatgaacaagaatca
ctattaactgaaattatcgctgctgaagaacaagaaaatcgcaattctcaactaacaaca
atgcagcaaatcttaattgagacgattaatcaacttgaaccccaagcacagaaaattctc
caactttactatgctgaaggagaaatccaacaaaatattgccaaaatcttagaaattccc
caatatacagtttctcgtcgtcttaccaaagttagggaaaacttactcaaaactttaatt
caatggagtcaacaacatctgcatatttccgttactccagacctactcaaaaatacaaac
gcgattatggaggaatggttacaggcttattatagtgctaaaagatacggaacctcaaat
agtctctccccttaa
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