Cicer arietinum (chickpea): 101512446
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Entry
101512446 CDS
T02819
Name
(RefSeq) DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
cam
Cicer arietinum (chickpea)
Pathway
cam03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
cam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
101512446
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cam03400
]
101512446
Enzymes [BR:
cam01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
101512446
DNA repair and recombination proteins [BR:
cam03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
101512446
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT_2
DNA_ligase_A_C
BRCT
PTCB-BRCT
RNA_ligase
DNA_ligase_IV
Motif
Other DBs
NCBI-GeneID:
101512446
NCBI-ProteinID:
XP_004487997
UniProt:
A0A1S2XGH1
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All DBs
Position
Ca1:20073529..20095575
Genome browser
AA seq
1168 aa
AA seq
DB search
MTEQTKFSVLCSLLTWTQRTKSPAKKRAKFRKFLDSFCTDRNYFPAIRLILPNLDRERGS
YGLKESVLATSLIDALGLSKDSHDALRLVNWRKGGSKTGVNAGNFALVASEVLQLRQGTA
SGGLTIKELNDLLDQLSSSENRAEKTLVLSTLIQKTNAQEMKWIIMIILKDLKLGISEKS
IFHEFHPDAEDLFNVTCDLKLVCEKLRDRNQRHKRQDIEVGKAVRPQLAKRVANAAEAWK
KLHGKEVVAECKFDGDRIQIHKNGTEIHFFSRNFLDHSEYAHAMSEIIVQNILVDRCILD
GEMLVWDTSLNRFAEFGSNQEIAKAARDGLDSNRQLCYVAFDILYFGDTSVIHQTLKERH
EILRKVVRPMKGRLEILLPNGGINSHRSSGEPCWSFIAHNADEVERFFKETIENRDEGIV
VKDLSSKWEPSDRSGKWLKLKPEYIQAGSDLDVLIIGGYYGSGRRGGEVAQFLVGLAERP
SPNTHPKRFISFCRVGTGLSDDELEAVVTKLKPYFRKYEYPKKGPPNFYQVTNHSKERPD
VWVDSPEKSIILSITSDIRTIESEVFAAPYCLRFPRIDRVRYDKPWYECLDVQSFIELVQ
SSNGTTQRDTEYGSKKDSKPKRMKPSIRGEKKNVSIVPSHLIQTDVSSVTGGSLMFSNMM
FYFVNVPPSHSLESFHKIVAENGGTFSMNLNNSVTHCVAADSKGFKFDAAKRRGDIIHYT
WVLDCYKQKKLVRLQPKYFLFLSELTKKKLQEEIDEFSDSYFLDLDLGDIKQLLSNINRS
GSEDVSTVDHYRKKYCPKDKWSVFNGCSIYFDTTMPSLKEDWQFLLVLSLKRFKLEVLMG
GGKVTSNLNFATHVVALFLPSCHNHEEIESSFTLVERKLLRSKRLHVVNSKWLEDCLKSS
QRLSEDTYSLKPYGIEESTAEDCEHELAVDADLIKDNVEDQNISFSNKESKQSRAKAASG
DSLALASQEKRGLRKRGRPAGRGIKKVKTDGNQARKARSQIAKKRAKLCEYESDESDSLD
KKPYEQEADIAEGSLDFYNEHSEPHETEKTHDVQGTKAVECSEQNKGIELVDFRDKQHEN
MSVPEIEMNDVHNDENSHVTEKLEILTDPVQAMLLDMIPSLATEKVEQPLNSYVEEEKPP
EISNEEPSTSKKKKVSFKAIAGDLLKDW
NT seq
3507 nt
NT seq
+upstream
nt +downstream
nt
atgacggaacaaacaaaattcagcgtattatgcagtctactaacatggacacagcgaacc
aaatcgccggcgaagaaacgcgccaagtttcgcaaattcctcgactctttctgcaccgat
cgcaactacttcccggctattcgtctcattcttcctaaccttgatcgcgaacgaggctcc
tatggtctcaaagagtccgttctcgctacttcacttattgatgctcttggattgtctaaa
gactcacatgacgctcttcgtcttgtcaattggcgtaaaggcggttctaaaacaggtgtt
aatgccggtaatttcgcccttgttgcctccgaggtgctgcagctcaggcaaggtactgct
tcgggtggattgacgataaaagagttgaatgacttgcttgatcaattgtcttcgagtgaa
aacagggctgagaagactttggttctttcaacccttatccaaaagacaaatgcacaggaa
atgaagtggattatcatgataatcttgaaagatttgaagctgggaattagtgaaaaaagc
atttttcatgaattccatccagatgctgaagacttgtttaatgttacgtgtgacctgaaa
ttagtttgtgaaaagctaagggatcgaaaccaacgtcataagcggcaggatattgaggtt
ggaaaagctgtgcgccctcaattagctaaaagagtagctaatgcagctgaagcatggaag
aagcttcatggcaaggaagtggttgctgagtgcaaatttgatggtgaccgcattcaaatt
cataaaaatggaacagagatacatttcttctcaaggaactttcttgatcattctgaatat
gcacatgcgatgtcagaaatcatagtacaaaacattcttgtagataggtgcatacttgat
ggtgaaatgttggtctgggatacatccttgaaccgttttgctgagtttggctctaatcag
gaaatagccaaggcagcaagggatggacttgatagtaatagacagttatgctatgttgca
tttgatatcctttattttggggatactagtgtaattcaccaaacattgaaggagcggcat
gagattctacgtaaagttgtgaggcccatgaagggtcgtttggaaattttactacctaat
ggtggtatcaacagtcatcggtcttctggtgaaccatgttggtcgtttattgctcataat
gcggacgaagttgagagatttttcaaagaaaccattgagaatagagacgagggaattgta
gtaaaagacctcagctctaaatgggaacctagtgaccgcagtggaaaatggctaaaattg
aagcccgaatacattcaagctggctctgatctggatgtacttatcataggtggctactat
ggttccggacgacgtggaggagaggttgctcaattcttggtgggccttgcagagcgtcca
tcaccaaatacacatcccaagcgatttatctccttttgcagagttggtactggactttct
gatgacgagcttgaagcagtggtaaccaaattaaaaccttacttcagaaagtatgaatat
ccaaagaaggggccaccaaatttttatcaagttactaatcactccaaagaaagacctgat
gtgtgggttgatagccctgagaaatcaattattctgtctataaccagtgatatccgaact
atagaatctgaggtgtttgctgcaccttactgcctgaggtttcctcgtattgacagggtg
agatatgacaagccttggtatgaatgtcttgatgtacaatcatttatagaattagtgcaa
tctagcaacggtaccacacagagggatacagaatatgggagcaagaaggacagtaaaccc
aaacgcatgaagccctctataaggggtgaaaagaaaaatgtgtccattgttccttctcat
ttaattcaaaccgatgtttccagtgttacggggggttccttaatgttttcaaatatgatg
ttctactttgttaatgtgcctccatcgcattcccttgagtccttccacaaaatagttgct
gagaatgggggcactttctcgatgaatttgaataactcagtcacgcattgtgttgcagca
gacagcaaagggtttaaatttgacgcagcaaaacgccgtggtgatatcattcattatact
tgggtattagattgctataaacaaaagaagcttgtccgcttacagccgaagtacttcctc
ttcctatctgaactgaccaagaagaagttacaagaagaaattgacgagttctcggactct
tacttcttggatctcgatcttggagacatcaaacagctcttaagcaatattaataggtca
ggttcagaagatgtcagtactgttgatcattacaggaaaaaatactgcccaaaggataag
tggtcggtgtttaatggatgctccatttatttcgacaccacaatgccatcattgaaagaa
gattggcaatttctattggtactttctttgaagagattcaagcttgaagttctcatgggt
ggtggaaaggtcacctctaacctcaattttgcaactcatgtagtggccttgttcctacca
agttgtcataaccatgaagaaatagagagtagttttactttagttgagagaaaacttctt
cgaagcaagaggttgcatgtagttaactccaagtggttagaggattgtttgaagagtagc
caaagattatcagaagacacttatagcttgaagccctatggaatagaagagtcaactgcc
gaggattgtgaacatgaattggcggtagatgctgatctgattaaagataatgtggaagac
caaaatatatctttctctaacaaggaaagtaaacagagtagggcaaaagctgcttctgga
gacagtttggctttggcatcccaagagaagcgtggcctaaggaaacgaggaagacctgca
ggaagaggtattaaaaaagtgaaaacagacggaaaccaagctcgaaaagcacgatcgcaa
atcgcgaaaaagcgtgcaaaattatgtgaatatgaatcagatgaaagtgattctcttgat
aaaaaaccatatgagcaagaggctgacattgctgaaggaagtcttgatttttacaatgaa
cattcagaaccacatgagactgagaaaactcatgatgtccaaggtactaaagcagtggaa
tgttccgaacaaaacaagggaatcgagctagtggatttcagggacaaacaacatgaaaat
atgtctgttccagaaattgaaatgaatgatgtgcacaatgacgaaaatagtcatgtgact
gagaagcttgaaattttgactgatcctgtgcaggctatgttacttgacatgattcctagc
cttgccacagaaaaagttgagcaacctttgaatagttatgttgaggaagagaagccacca
gaaatctccaatgaagagccttcgacttcaaagaaaaagaaagttagcttcaaggctatc
gctggtgatctgctcaaggattggtag
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