Cicer arietinum (chickpea): 101515139
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Entry
101515139 CDS
T02819
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 38
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
cam
Cicer arietinum (chickpea)
Pathway
cam03013
Nucleocytoplasmic transport
cam03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cam00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101515139
03015 mRNA surveillance pathway
101515139
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cam03019
]
101515139
Enzymes [BR:
cam01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
101515139
Messenger RNA biogenesis [BR:
cam03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
101515139
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
DUF5815
Motif
Other DBs
NCBI-GeneID:
101515139
NCBI-ProteinID:
XP_004506252
UniProt:
A0A1S2YL17
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All DBs
Position
Ca6:complement(32273430..32279270)
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AA seq
491 aa
AA seq
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MAEPSTTSPPPPPPSTKSWADQAEEETNPSSTSAAEPSTPSLDELAIDDNNNPHKLLDDP
DDSNIQAVTSGDTPYTSAATFEDLSLSPELLKGLYVEMKFQKPSKIQAISLPMILNPPHR
DLIAQAHNGSGKTTCFVLGMLSRVDPNLQAPQALCICPTRELAIQNVEVLRKMGKYTGIS
SECAVPMDSRDSTPISKRAPIMAQVVIGTPGTIKKWMTYKKLGVTRLKILVFDEADQMLA
EDGFKDDSLRIMKEIEKFNSNCQVLLFSATFNDTVKNFVTRIVEKKEHNKLFVKKEDLSL
DAVKQYKVRCPDELAKIEVIRSYIFEIGENVGQTIIFVRTRNSAKMLHKALVDLGYEVTS
IQGALEHEERDKIVKEFKDGLTQVLISTDVLARGFDQQQVNLVINYDLPLKYAAEYIRGR
DPEPDFEVYLHRVGRAGRFGRKGAVFNLLCDERDEKLMSKIENHFGTHVKEVREKSVEDY
KAALKEAGLLV
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaccttctaccacctctcctccaccaccgccgccgtcgactaagagctgggcc
gaccaagctgaagaagaaaccaatccatcctcaacctccgccgcagagccctcgactccg
tcgctcgacgaattagcaatcgacgacaacaacaatcctcataagttattggacgatccc
gatgactccaacattcaagcggttacctccggtgacacaccgtatacgtccgcggcaacg
ttcgaagatctttccctctcgccggagcttctgaagggtctctatgtggagatgaagttt
caaaaacctagtaaaatacaagctataagcttgccgatgattcttaaccctccacatagg
gatttgattgcacaggcacataatggttctgggaaaaccacttgtttcgtgcttgggatg
cttagtcgtgttgatcctaacttgcaagctcctcaagctctctgtatttgccccactaga
gagttagctattcagaatgttgaggttctccgtaagatgggaaagtacacggggattagt
tcagaatgtgcagttccgatggacagcagggattcaactccaatatcgaaacgggcgcct
attatggctcaggtggttattggtactcctggcacaattaagaaatggatgacttataag
aaacttggggtgacgagattgaagattctcgtttttgatgaggctgatcaaatgcttgct
gaggatggatttaaagatgattctctgaggataatgaaagaaatagaaaaattcaattca
aactgtcaggttcttctgttttctgctacatttaatgacactgtcaagaatttcgttaca
aggattgttgagaagaaggagcataataaactttttgtgaagaaagaggatctatcttta
gatgcagtgaagcagtacaaagtgcgttgtcctgatgaactcgctaagattgaagtgata
agaagttatatatttgaaataggagagaatgtggggcaaactattatatttgtgcgcact
agaaatagtgcaaaaatgttgcataaagctcttgttgatttaggctatgaggttacttcc
atacaaggtgctcttgaacatgaagaaagagacaagatcgtcaaagagttcaaagatggt
ttgactcaggttcttatatcaactgacgtccttgcccgtggatttgatcagcaacaggtt
aatttggttatcaactatgatcttccactgaagtacgctgctgagtacatccgtggccgt
gatcctgagcctgattttgaggtgtatttgcacagggttggtcgggctgggcgatttggg
cgcaagggggctgtatttaacctgctatgcgatgaaagggatgaaaagctcatgtcaaag
attgaaaaccattttggcacccacgtaaaagaggtacgagaaaaaagtgtcgaagactat
aaagctgctcttaaggaagctggtttgctcgtgtga
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