Citrobacter amalonaticus Y19: F384_00305
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Entry
F384_00305 CDS
T03934
Name
(GenBank) ATP-dependent helicase
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
cama
Citrobacter amalonaticus Y19
Brite
KEGG Orthology (KO) [BR:
cama00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cama03021
]
F384_00305
Transcription machinery [BR:
cama03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
F384_00305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_RapA
Tudor_1_RapA
Helicase_C
SNF2-rel_dom
ResIII
DEAD
AAA_34
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
AKE57692
UniProt:
A0A0F6TSL7
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All DBs
Position
complement(65118..68024)
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AA seq
968 aa
AA seq
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MPFTLGQRWISDTESELGLGTVVAMDARTVTLLFPSTGENRLYARSDSPVTRVMFNPGDT
ITSHEGWQLQIDEVKEENGLLAYIGTRLDTEETGVTLREVLLDSKLTFSKPQDRLFAGQI
DRMDRFALRYRARKFQSEQYRMPWSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVG
LGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLHFALFDDERYAEAQH
DALNPFETEQLVICSLDFARRNKQRLEHLCDAEWDLLVVDEAHHLVWSEEAPSREYLAIE
QLAERVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLL
AGNKLSNEELNMLGELIGEQDIEPLLQTANSDRDGAQNARQELVSMLMDRHGTSRVLFRN
TRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKNAEDRARDMLYPEQIYQEFEGD
TGTWWNFDPRVEWLMGYLTSHRSQKVLVICAKATTALQLEQVLREREGIRAAVFHEGMSI
IERDRAAAWFGEEDSGAQVLLCSEIGSEGRNFQFASNLVMFDLPFNPDLLEQRIGRLDRI
GQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRAIYDTVYSNLINYLAAPEET
DGFDELIKTCREQHEALKSQLEQGRDRLLEIHSNGGEKAQQLAESIEEQDDDTSLIAFAM
NLFDIVGINQDDRGENLIVLTPSDHMLVPDFPGLPEDGCTITFERDVALSREDAQFITWE
HPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLLELVYVVEAQAPKQLQLNRFLPPTP
IRMLLDKNGNNLAAQVEFETFNRQLSAVNRHTGSKLVNAVQQDVHAILQLGEAQVEKSAR
ALIDAARNEADEKLSGELSRLEALRAVNPNIRDDELAAIESNRQQVLESLNQAGWRLDAL
RLIVVTHQ
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgccttttacacttggtcaacgctggatcagcgatacagaaagcgaactgggacttgga
accgtcgtcgccatggatgcgcgcaccgtcactttgctttttccctccactggcgaaaac
cgtctgtatgcgcgcagtgactcccccgtgacccgcgtgatgttcaaccctggcgatacc
attaccagtcatgaaggctggcaactgcaaatcgatgaagtaaaagaagaaaacggtttg
cttgcctacattggtacccgtcttgataccgaagaaaccggcgtgacgctgcgtgaggtt
ctgctcgacagtaagctgacgttcagtaaaccgcaggatcgtctgtttgccggtcagatt
gaccgcatggaccggtttgcgctgcgctatcgcgcgcgtaaatttcagagcgaacagtac
cgtatgccgtggagcggcctgcgcggacagcgcaccagtctgatccctcaccagttaaac
atcgcccacgacgtgggtcgtcgtcatgcaccgcgcgtgctgctggcggatgaagtgggg
ctggggaaaaccattgaagccgggatgatcctgcatcaacaactgctttccggcgcggca
gaacgcgtgctgattattgtgccggaaaccttacagcatcagtggctggtcgaaatgctg
cgccgttttaatctgcatttcgccctgtttgacgacgagcgctacgccgaagcacagcac
gacgcgctaaacccgtttgaaaccgaacaactggttatctgctcactggatttcgcccgc
cgcaacaaacagcgcctggaacatctgtgtgatgccgagtgggacctgctggttgtcgat
gaagcccaccaccttgtctggagcgaagaggcaccgagtcgcgagtatctggcgattgaa
caactggcggaacgtgtgccaggcgtactgttgctgaccgccaccccggaacaactgggt
atggaaagccactttgcgcgtctgcgcctgctggatcccaaccgtttccacgatttcgcg
caatttgttgaagagcagaaaaactatcgtccggttgccgacgccgtcgccatgctgctg
gccggtaacaaactcagcaatgaagaactcaacatgctgggtgaactgatcggcgagcag
gatatagagccgctgctgcaaaccgcgaatagcgaccgcgacggcgcgcagaacgcgcgt
caggaactggtctccatgctgatggaccgccacggcaccagccgcgtgctgttccgcaac
acccgtaatggcgtgaagggcttcccgaaacgcgaactgcacaccattaagctgccgctg
ccgacgcagtatcagactgccattaaagtgtccggcatcatgggtgcccgcaaaaacgcc
gaagacagagcgcgcgatatgctctatccggaacagatttatcaggaatttgaaggtgat
accggcacatggtggaacttcgacccgcgcgttgagtggctgatgggctacctgaccagc
catcgctcgcagaaagtgctggtgatctgcgcgaaagcgacaaccgccctgcaactggag
caagtgctgcgtgaacgtgaaggtatccgcgccgccgtcttccatgaaggcatgtcgatt
atcgaacgcgaccgcgccgccgcctggtttggtgaagaggacagcggcgcgcaggtgctg
ttgtgttcagaaatcggctcggaagggcgtaacttccagtttgccagcaacctggtgatg
ttcgacctgccgttcaacccggacctgctggagcagcgtattggccgtctcgaccgtatt
ggtcaggcgcacgatatccaaatccatgtcccgtatttagagaaaaccgcccagtcggtg
ctggttcgctggtatcacgaaggcctggatgcgttcgaacatacctgcccgaccggtcgc
gccatctatgacacggtctacagcaacctgatcaactatctggcggcacccgaagagacc
gacggctttgatgagctgatcaaaacctgtcgcgaacagcatgaagcgctgaagtcgcaa
ctggagcagggccgtgaccgcctgctggagatccattccaacggtggcgaaaaggcgcag
caactggctgaaagcattgaagagcaggatgacgacaccagccttattgcctttgccatg
aacctgtttgatatcgtggggattaatcaggacgatcgcggcgaaaacctgattgtgctc
accccgtccgatcacatgctggtcccggattttccgggcctgccggaagacggctgcacc
attacctttgaacgtgacgtggcgctgtcgcgtgaagatgcccagtttattacctgggaa
caccccctgattcgtaacggtctggatctgatcctctccggtgataccggcagcagcacc
atttcgttgctgaagaacaaagccttgccggttggaacgctgctgctggaactggtatac
gttgtggaagcccaggcaccgaaacagcttcagcttaaccgcttcctgccgccgacgccg
atacgcatgctgctggataaaaacggcaataatctcgccgcacaggtggagtttgaaacc
ttcaaccgccagttgagcgccgttaaccgccacaccggtagcaaactggttaacgcggtg
cagcaggatgttcatgcgattctgcaactgggtgaggcgcaggttgagaagtctgcccgc
gccctgattgacgctgcgcgtaatgaagcggatgaaaaactgtctggcgaactgtctcgt
ctggaagcgctgcgcgccgtcaacccgaacatacgtgatgacgaactcgcggcgattgaa
agcaaccgtcagcaggtgctggaaagcctgaatcaggcgggatggcgtctggatgcgctg
cgtcttatcgtcgtcacgcatcagtaa
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