Cobetia amphilecti: LCW13_13090
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Entry
LCW13_13090 CDS
T07922
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
camh
Cobetia amphilecti
Brite
KEGG Orthology (KO) [BR:
camh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
camh03016
]
LCW13_13090
Enzymes [BR:
camh01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
LCW13_13090
Transfer RNA biogenesis [BR:
camh03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LCW13_13090
Prokaryotic type
LCW13_13090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
UBU50480
LinkDB
All DBs
Position
complement(3112058..3113119)
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AA seq
353 aa
AA seq
DB search
MQRWPHAHGGPLGAGDFRHTPEDFRVTELMDFVPEGHGEHQWLWVEKRGLTTDELCRELA
GLCEVASRDIGVAGLKDKQAITQQWVSVWLPGREAPQDLSDALAEKGVRVLASVRHPRKL
KRGVHRGNRFALRVSGEAVAHPEFEARWQTLIRDGVPNYFGPQRFGHQGHNLGRARAVLV
RGWRKRDDRSGMLLSTARSFLFNEVLAARLKAHCWATALSGEVFALNGTGSRFVTDGSES
AETLAQRLASGDIHPTGPLWGTGRAEAHAQVAQLEQVLATRWPQLCEGLEKAGVKAERRP
LRLMPGKPRLEWDITPEQAKTEGGEASVWLHFDLPRGSFATGLLRELIAHPLL
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgctggccgcatgcgcatggcggcccgctgggagccggcgacttccgtcacacg
ccggaggacttccgggtcaccgagctgatggacttcgtgcccgaaggtcacggcgagcat
cagtggctgtgggtcgagaaacgtggcctgaccaccgatgagctgtgccgtgaactggcc
ggcctgtgtgaggtcgcgtcgcgtgatatcggcgtggccggtctcaaggacaagcaggcg
atcacccagcagtgggtctccgtgtggttgccggggcgtgaagcgccgcaggatctcagc
gatgcgctggccgagaagggcgtccgcgtgctggccagcgtgcgtcatccgcgcaagctc
aagcgtggcgtgcatcgcggcaaccgcttcgcgctgcgtgtcagtggtgaggccgtcgcg
catcccgagttcgaggcgcgctggcagacgctgatacgtgatggtgtgcccaactatttc
gggccgcagcgcttcgggcatcagggacataatctcggccgggcacgtgccgtgctggtg
cgtggctggcgcaagcgtgatgaccgcagcggcatgctgctgtcgaccgcgcgcagcttc
ctgttcaacgaggtgctggctgcgcgcctcaaggcgcattgctgggcgacggcgttgagc
ggtgaggtgtttgcgctcaacgggacgggctcgcgcttcgtcaccgatggcagcgagtcg
gccgagacgctggcgcagcgcctggcgagtggcgatattcatcccactggcccgctgtgg
ggcaccggacgggcggaggctcatgcgcaggtcgcccagctcgagcaggtcctggccacg
cgttggccgcagctgtgcgaggggctcgagaaggccggcgtcaaggcggagcgtcgtccg
ctgcgcctgatgcccggcaagccgcgtctggagtgggatatcacgccagagcaggcaaaa
accgaaggtggcgaggccagtgtctggctgcacttcgatctaccgcgcggcagcttcgcg
acgggcctgttgcgtgagctgatcgcccatccgctgctgtag
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