Campylobacter sp. RM16704: CAQ16704_1207
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Entry
CAQ16704_1207 CDS
T03560
Symbol
uvrB
Name
(GenBank) UvrABC nucleotide excision repair complex, subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
camr
Campylobacter sp. RM16704
Pathway
camr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
camr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CAQ16704_1207 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
camr03400
]
CAQ16704_1207 (uvrB)
DNA repair and recombination proteins [BR:
camr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CAQ16704_1207 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CAQ16704_1207 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
UB2H
SWI2_SNF2
Kinesin
Microtub_bd
AAA_7
DUF87
Motif
Other DBs
NCBI-ProteinID:
AJC86657
UniProt:
A0A0A8GYA9
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All DBs
Position
1179535..1181508
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AA seq
657 aa
AA seq
DB search
MFKLTSDFKPSPDQKQAIDGIVKSIKAGNKYQTLLGVTGSGKTFTMANIIKNLNMPTLIM
SHNKSLCAQLYSEFKGFFVNNHVEYFISYYDYYQPEAYIPRTDVFIEKDSSTNEDLERLR
LSASASLLSYDDVICIASVSANYGLGNPNEYVGMVMILEQNMQINQKELLKKLVNMGYKR
NDNFFDRADFRVNGDIIDIYPAYYEDEAIRLEFFGDELEAMYHYNILENKKGKDLKKFIL
YPTSQFSVGEARLKEAIKGIKAELNERLAYFENENKLVEAQRLKQRVEFDLEMLQSTGMC
KGVENYALHLTGLKSGDTPYTLFDYFAIKNQDFLVIVDESHVSLPQFRGMFAGDRSRKQT
LVDYGFRLPSALDNRPLMFDEFINKNCKFLFVSATPAPLELELSKKNIFHQIMRPTGLLD
PKIEIKDSDNQVEILYDEAKKVIERGERVLITVLTKKMAEELSKYYLELGLKVKYMHSEI
DAIERNEIIRGLRSGAFDILIGINLLREGLDLPEVSLIAIMDADKEGFLRSTTALIQTMG
RAARNVNGKVLLFAKKITKSMQEAIDTTSERRVLQEAYNKKYNITPTSVTRNIEESLKQN
LEQGEIYRKGKELEKMPAKERAKIVKELRKQMLEAAKNLEFEKAAMFRDEINKLKIL
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaacttactagtgattttaagccaagtcctgatcaaaaacaagccattgatggt
atagtaaaaagcattaaagcaggtaataaataccaaactttactaggcgttacaggcagt
ggaaaaaccttcactatggcaaatatcattaaaaacttaaatatgcctactcttatcatg
agccacaacaaaagcttatgtgcacaactttatagcgaatttaaaggtttttttgtaaac
aaccatgtggaatattttataagttattatgattattatcaaccagaagcttacatacca
agaaccgatgtttttatagaaaaagatagctctacgaatgaagatttagaaagattaaga
cttagtgcaagtgcttcacttttaagttatgatgatgttatttgtatagcaagtgtttcg
gcaaattacggcttaggcaatcctaatgagtatgttggtatggtcatgattttagagcaa
aatatgcaaataaatcaaaaagaacttttaaaaaaacttgtaaatatgggctataagcgt
aatgataatttctttgatagggctgattttagggtcaatggagatattattgatatatat
ccggcttattatgaagatgaagctattagacttgaattttttggtgatgaacttgaagca
atgtatcattataacattttagaaaataaaaaaggtaaagatttaaaaaaatttatactt
tatcctacaagtcaatttagcgtaggtgaagcaaggcttaaagaagcaatcaaaggtata
aaagctgaactaaatgaacgcctagcatattttgaaaacgaaaataaattagtagaagca
caaagattaaagcaaagggtagaatttgaccttgaaatgcttcaaagcacaggtatgtgc
aagggggtagaaaattatgctttacatttaacaggattaaaaagcggggatactccttat
acactatttgattattttgcaataaaaaatcaagattttttagtaattgttgatgaatct
catgtttcattacctcaatttcgtggtatgtttgcaggagacagaagtagaaagcaaacc
ttggttgattatggatttcgtttgcctagtgccttagataataggcctttgatgtttgat
gaatttattaataaaaattgtaaatttttatttgtttcagctactcctgcaccattagaa
cttgaactaagcaaaaaaaatatctttcatcaaatcatgcgtccaacaggacttttagat
cctaaaatagaaatcaaagatagtgacaatcaagttgaaattttatatgatgaagcaaaa
aaagtcatagagcgtggtgaaagagttttaatcaccgttttaactaagaaaatggctgaa
gaacttagcaaatattacttagagcttggcttaaaagtaaaatatatgcattcagaaatt
gatgcaattgagcgtaatgagattattcgtggtttaagaagtggtgcatttgacatttta
ataggtattaatcttttaagagaaggacttgacttacctgaagtttcgcttatagctata
atggatgcagataaagaaggctttttaaggagtactactgcactcattcagactatggga
cgagctgctagaaatgtaaatggcaaagtattactttttgctaaaaaaattacaaaatct
atgcaagaagctattgatactactagcgaaagaagagttttgcaagaagcttataataaa
aaatacaatatcacaccaacttcagtaacaaggaatatagaagagagtttaaaacaaaac
cttgagcaaggagaaatttatcgcaaaggcaaagaacttgaaaaaatgcctgctaaagaa
cgggctaaaatagtaaaagagttaagaaagcaaatgttagaagcagctaaaaatcttgaa
tttgaaaaagctgcaatgtttagagatgaaattaataaactaaaaattttatag
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