Colobus angolensis palliatus (Angola colobus): 105513768
Help
Entry
105513768 CDS
T08744
Symbol
SKIV2L
Name
(RefSeq) helicase SKI2W isoform X1
KO
K12599
antiviral helicase SKI2 [EC:
5.6.2.6
]
Organism
cang
Colobus angolensis palliatus (Angola colobus)
Pathway
cang03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cang00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105513768 (SKIV2L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cang03019
]
105513768 (SKIV2L)
Enzymes [BR:
cang01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
105513768 (SKIV2L)
Messenger RNA biogenesis [BR:
cang03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
105513768 (SKIV2L)
mRNA degradation factors
3'-5' decay
Ski complex
105513768 (SKIV2L)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
Ski2_N
MTR4_beta-barrel
DEAD
MTR4-like_stalk
Helicase_C
ResIII
DUF3516
Motif
Other DBs
NCBI-GeneID:
105513768
NCBI-ProteinID:
XP_011800150
Ensembl:
ENSCANG00000039709
LinkDB
All DBs
Position
Unknown
AA seq
1246 aa
AA seq
DB search
MMETERLVLPPPDPLDLPLRAVELGCTGRWELLNLPGAPESSLPHGLPPCAPDLQQEAEQ
LFLSSPAWLPLHGVEHSARKWQRKTDPWSLLAVLGAPVPSDLQAQRHPTTGQILGYKEVL
LENTNLSATTSLSLRRPPGPASQSLWGNPTQYPFWPGGMDEPTITDLNTWEEAEEEIDFE
KDLLTVPPGFKKGMDFAPKDRPTPAPGLLSLSYLLEPLDLGGGDEDENEAVGQPGGSRRD
AVSASPCSTPLARASSLEDLVLKEASTAVSAPEAPEPPPQEQWAIPVDATSPVGDFYRLI
PQPAFQWAFEPDVFQKQAILHLERHDSVFVAAHTSAGKTVVAEYAIALAQKHMTRTIYTS
PIKALSNQKFRDFRNTFGDVGLLTGDVQLHPEASCLIMTTEILRSMLYSGSDVIRDLEWV
IFDEVHYINDAERGVVWEEVLIMLPDHVSIILLSATVPNALEFADWIGRLKRRQIYVIST
VTRPVPLEHYLFTGNSSKTQGELFLLLDSRGAFHTKGYYAAVEAKKERMSKHAQTFGAKQ
PTHQGGPAQDRGVYLSLLASLRTRAQLPVVVFTFSRGRCDEQASGLTSLDLTTSSEKSEI
HLFLQRCLARLRGSDRQLPQVLHMSELLNRGLGVHHSGILPILKEIVEMLFSRGLVKVLF
ATETFAMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLDPTGTVILLCK
GRVPEMADLHRMMMGKPSQLQSQFRLTYTMILNLLRVDALRVEDMMKRSFSEFPSRKDSK
AHEQALAELTKRLGALEEPDMTGQLVDLPEYYGWGEELTETQHMIQRRIMESVNGLKSLS
AGRVVVVKNQEHHNALGVILQVSSNSTSRVFTTLVLCDKPLSQDPQDRAPATPEVPYPDD
LVGFKLFLPEGPCDHTVVKLQPGDMAAITTKVLRVNGEKILEDFSKRQQPKFKKDPPLAA
VTTAVQELLRLAQAHPAGPPTLDPVNDLQLKDVSVVEGGLRARKLEELIRGAQCVHSPRF
PAQYLKLRERMQIQKEMERLRFLLSDQSLLLLPEYHQRVEVLRTLGYVDEAGTVKLAGRV
ACAMSSHELLLTELMFDNALSTLRPEEIAALLSGLVCQSPGDAGDQLPNTLKQGIERVRA
VAKRIGEVQVACGLNQTVEEFVGELNFGLVEVVYEWARGMPFSELAGLSGTPEGLVVRCI
QRLAEMCRSLRGAARLVGEPVLGAKMETAATLLRRDIVFAASLYTQ
NT seq
3741 nt
NT seq
+upstream
nt +downstream
nt
atgatggagacagagcgactcgtgctacctcctccagatcccctggacctaccccttcgg
gccgtggagctcggatgcacgggtcgctgggagctgctgaacttgcctggagctccagag
agcagccttccccatggcctccctccctgtgccccagatctgcagcaagaagcagaacag
ttgtttctgtcatccccagcctggctgcctctgcatggtgtggagcactcagcccgaaaa
tggcagaggaagacggatccctggtctcttttggctgtcctgggagccccagtcccatct
gacctacaggcccaaagacacccaaccacaggccagatactgggttacaaagaggtcttg
ctggagaacacaaatctctcggccacaacctccttgtctcttcgccggcctccagggcca
gcctcccagtctttatggggaaatccaactcagtatcccttctggccaggggggatggat
gaacccaccataacagatctgaacacatgggaggaggctgaggaggagatagactttgag
aaagatcttcttactgttccacctggtttcaagaaaggcatggactttgcaccaaaagat
cgtccaactccagcgcctggactgctaagccttagctatctgttggagcctctggatttg
ggtgggggtgacgaggatgagaatgaggcagtgggacagccaggaggttccagaagggac
gctgtttcagcctctccctgcagtactcccctggcccgagcaagcagtttggaggaccta
gtgttgaaggaagcgtccacagctgtatccgccccagaagccccagagcctccacctcag
gagcagtgggccatacctgtggatgccacctcccccgttggtgatttctatcgcctcatt
ccccagccagccttccagtgggcatttgagccagatgtgtttcagaaacaggccatcctg
cacttggagcggcatgattctgtctttgttgcagctcacacatctgcaggaaaaacagtt
gtggctgaatatgccattgccctggcccagaaacacatgacacgcaccatctacacttcg
cccatcaaggccctgagcaaccagaagttccgggacttccgaaacacgtttggggatgtg
gggttgctcactggggatgtgcagctgcacccggaggcctcctgcctcatcatgaccaca
gagatccttcgctccatgctgtacagtggctcagatgttattcgggacctggagtgggtc
atctttgatgaggttcactatattaacgatgccgagcgtggggtcgtgtgggaggaggtg
ctcatcatgctccctgaccacgtttctatcatccttctgagtgccaccgtccccaacgcc
cttgagtttgctgactggatcgggcgactgaagcgtcgtcagatctatgtgattagcact
gtaacccgccccgtgcccctggagcactatcttttcacagggaacagctccaagacccag
ggggagctctttttgttgctggactcccgaggagccttccatacaaaagggtactatgca
gctgtggaggccaagaaggagagaatgagcaaacatgcccagacctttggggccaagcag
cccacacatcaggggggccctgcacaggaccgcggagtgtacctgtccctcctggcctcc
ctccgcacacgggcccagttgcctgtggtggtgttcaccttctcccggggccgctgtgat
gagcaggcctcaggcctcacctcccttgacctcaccaccagttcagagaagagtgagatc
cacctcttcctgcagcgctgccttgctcgcctccgtggctctgatcgccagctgccccag
gtcctgcacatgtcagagctcctgaatcgtggcctgggtgtgcaccatagcggcatcctg
cccatcctcaaggagatcgtggagatgctcttcagccgtggcctggtcaaggtcttgttt
gccacagagacctttgccatgggagtaaacatgccggctcgtacagtagtgtttgactcc
atgcgcaagcacgatggctccaccttccgggacctgctccctggggagtatgtgcagatg
gcaggccgggcagggcggaggggcctggaccccacaggcaccgttatcctgctctgcaag
ggccgagtgcccgagatggcagacctgcaccgcatgatgatggggaagccatcccagctg
cagtcccagttccgcctcacgtacactatgatcctcaacttgctgcgggtggatgccctc
agggtggaggacatgatgaagaggagcttctctgagtttccttcccgcaaggatagcaag
gcccatgaacaagccctggccgaactgaccaagaggctgggggctttggaggagcctgac
atgactggccaactggtcgacctgcctgaatattatggctggggggaggaactgacagag
acccagcacatgattcagcgacgcatcatggagtctgtgaacgggttgaagtctctctca
gcaggaagggtggtggttgtgaagaatcaggagcatcacaacgcactgggagtgatccta
caggtctcctcgaactccaccagcagagtattcacaaccctggtcttgtgtgataagccc
ttgtcccaggacccacaggacagggcgccggccactccagaggtgccctatccagatgac
ctcgtgggattcaagctgttcctgcctgaagggccttgtgaccacaccgtggtcaagctc
cagccaggagatatggctgccatcaccaccaaagtgctccgggtgaatggggagaagatc
ttggaggacttcagcaagaggcagcagccaaaattcaagaaggatcctccccttgcagcc
gtgaccactgctgtccaggaactactgcgtctggctcaggctcacccagctggacccccc
acccttgaccctgtcaatgacctgcagctcaaagatgtgtcagttgtagagggtgggctc
cgggcccggaagctggaggagctgatccggggggctcagtgtgtacacagcccccgtttt
cctgcccagtacctgaagctgcgggagcgaatgcagatacagaaggagatggagcggctg
cgcttcctactgtcagatcagtcactgctgctgcttcctgagtaccaccagcgagtagag
gtgctccgaaccctgggttacgtggacgaggcgggcaccgtgaagctagcagggcgggtg
gcttgtgccatgagcagccatgagttgctcctcactgagctcatgtttgacaatgcacta
agcaccctgcggcctgaggagattgctgccttgctctctggcctggtctgccagagccct
ggggatgctggggatcagctcccaaacaccctcaagcagggaatagaacgtgtccgggct
gtggccaagcggattggtgaggtccaggtggcttgtggcctgaaccagacagtggaggaa
tttgtgggcgagctgaattttgggctggtcgaggttgtatatgagtgggcccggggcatg
cccttctccgagttggcagggctctcagggacccccgagggcctggtggtccgctgcatt
cagcgcctggctgagatgtgtcgctcactgcggggggcagcccgcctagtaggagagcct
gtgctgggtgccaagatggagacagcggctaccttgctacggcgggacatcgtatttgcg
gccagcctctacacccagtga
DBGET
integrated database retrieval system
