Colobus angolensis palliatus (Angola colobus): 105514815
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Entry
105514815 CDS
T08744
Symbol
LIG1
Name
(RefSeq) DNA ligase 1 isoform X1
KO
K10747
DNA ligase 1 [EC:
6.5.1.1
6.5.1.6
6.5.1.7
]
Organism
cang
Colobus angolensis palliatus (Angola colobus)
Pathway
cang03030
DNA replication
cang03410
Base excision repair
cang03420
Nucleotide excision repair
cang03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cang00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
105514815 (LIG1)
03410 Base excision repair
105514815 (LIG1)
03420 Nucleotide excision repair
105514815 (LIG1)
03430 Mismatch repair
105514815 (LIG1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cang03032
]
105514815 (LIG1)
03400 DNA repair and recombination proteins [BR:
cang03400
]
105514815 (LIG1)
Enzymes [BR:
cang01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
105514815 (LIG1)
6.5.1.6 DNA ligase (ATP or NAD+)
105514815 (LIG1)
6.5.1.7 DNA ligase (ATP, ADP or GTP)
105514815 (LIG1)
DNA replication proteins [BR:
cang03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
105514815 (LIG1)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
105514815 (LIG1)
DNA repair and recombination proteins [BR:
cang03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
105514815 (LIG1)
NER (nucleotide excision repair)
Other NER factors
105514815 (LIG1)
MMR (mismatch excision repair)
Other MMR factors
105514815 (LIG1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_A_C
PucR
DUF1685
DDR
Motif
Other DBs
NCBI-GeneID:
105514815
NCBI-ProteinID:
XP_011801864
Ensembl:
ENSCANG00000030561
UniProt:
A0A2K5ICT0
LinkDB
All DBs
Position
Unknown
AA seq
919 aa
AA seq
DB search
MQRSIMSFFHPKKEGKAKKPEKEASNSSREMEPPPKAALKEWNGVVSDSDSPVKRPGRKA
ARVLGSEGEEEDEALSPAKGQKPAPDCSQVSPPRPATSPENSASLSDTSPMDSSPSGIPK
RRTARKQLPKRTIQEVLEEQSADEDREAKRKKEEEEVETPEESLTEAEVATEKEGEDRDQ
PATPPKPLKTSEAEIPVESVSEPKVATRQKLQEEEEQTKPPRSAPKTLSSFFTPRKPAIK
KEVKEEEPGTPGKEGAAEGPLDPSGYNPAKNNYHPVEDACWKPGQKVPYLAVARTFEKIE
EVSARLRMVETLSNLLRSVVALSPLDLLPVLYLSLNHLGPPQQGLELGVGDGVLLKAVAQ
ATGRQLESVRAEAAEKGDVGLVAENSRSTQRLMLPPPPLTASGVFSKFCDIARLTGSAST
AKKIDIIKGLFVACRHSEARFIARSLSGRLRLGLAEQSVLAALSQAVSLTPPGQEFPPAV
VDAGKGKTAEARKTWLEEQGMILKQTFCEVPDLDRIIPVLLEHGLERLPEHCKLSPGTPL
KPMLAHPTRGVSEVLKRFEEAAFTCEYKYDGQRAQIHALEGGEVKIFSRNQEDNTGKYPD
IISRIPKIKLPSVTSFILDTEAVAWDREKKQIQPFQVLTTRKRKEVDASEIQVQVCLYAF
DLIYLNGESLVREPLSRRRQLLRENFVETEGEFVFATSLDTKDVEQIAEFLEQSVKDSCE
GLMVKTLDVDATYEIAKRSHNWLKLKKDYLDGVGDTLDLVVIGAYLGRGKRAGRYGGFLL
ASYDEDSEELQAICKLGTGFSDEELEEHHQSLKALVLPSPRPYVRIDGAVTPDHWLDPSA
VWEVKCADLSLSPIYPAARGLVDSDKGISLRFPRFIRVREDKQPEQATTSAQVACLYRKQ
SQIQNQQGEDSGSDPEDTY
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgaagtatcatgtcattcttccaccccaagaaagagggtaaagcgaagaagcct
gagaaggaggcatccaacagcagcagagagatggagccccctccgaaggcagcactgaaa
gagtggaatggagtggtgtctgatagtgactctccagtgaagaggccagggaggaaggcg
gcccgggtcctgggcagcgaaggggaagaggaggatgaagcccttagccctgctaaaggc
cagaagcctgccccggactgctcacaggtctccccgccccgtcctgccacatctcctgaa
aacagcgcttccctctctgacacctctcccatggacagctccccatcagggatcccgaag
cgtcgcacagctcgaaagcagctcccgaaacggaccattcaggaagtcctggaagagcag
agtgcggacgaggacagagaagccaaaaggaagaaggaggaggaagaagtggagacccca
gaagaaagcctcacagaggctgaagtggcaacagagaaggaaggagaagacagggaccag
cccgccacacctcccaagcccctaaagacctccgaagcagagattccagtggaaagcgtt
tcggagcccaaggtggccacgaggcagaaactgcaggaggaggaagagcagaccaagcct
ccccgcagtgctcccaagacactcagcagcttcttcaccccacggaagccagcaatcaaa
aaagaagtgaaggaggaggagccagggactcctggaaaggagggagctgctgagggaccc
ctggacccatccggttacaatcctgccaagaacaactaccatcccgtggaagacgcctgc
tggaaaccgggccagaaggtcccttacctggccgtggcccggacgtttgagaagatcgag
gaggtgtctgcccggctccggatggtggagacgctgagcaacttgctgcgctccgtggtg
gccctgtcgcctctagacctcctccccgtcctctacctcagcctcaaccaccttgggcca
ccgcagcagggcctggagcttggtgtgggtgatggtgtccttctcaaggcagtggcccag
gccacaggtcggcagctggagtctgtccgggctgaggcagccgagaagggcgacgtgggg
ctggtggccgagaacagccgcagcacccagaggctcatgctgccaccacctccgctcact
gcttccggggtcttcagcaagttctgtgacatcgccaggctcactggcagtgcttccaca
gccaagaagatagatatcatcaaaggcctctttgtggcctgccgccactcagaagcccgg
ttcatcgccaggtccctgagcggacggctgcgccttgggctggcagagcagtcagtgctg
gccgccctctcccaggctgtgagcctcacgcccccaggccaagaattcccaccagccgtg
gtggatgctgggaagggcaagacagcagaggccagaaagacgtggctagaggagcaaggc
atgatcctgaagcagacattctgcgaggtgcccgacctggaccgaattatccccgtgctg
ctggagcacggcctggaacgtctcccggagcactgcaagctgagcccagggactcccctg
aaaccgatgttggcccatcccacgcggggcgtcagcgaggtcctgaaacgctttgaggag
gcagctttcacctgcgaatacaaatacgatgggcagagggcacagatccacgccctggaa
ggcggggaggtgaagatcttcagcaggaatcaggaagacaacactggaaagtacccggac
atcatcagccgcatccccaagattaaactcccatcggtcacatccttcatcctggacact
gaagccgtggcttgggaccgggaaaagaagcagatccagccattccaagtgctcaccacc
cgcaaacgcaaggaagtggatgcgtccgagatccaggtgcaggtgtgtttgtacgccttc
gacctcatctacctcaatggagagtccctggtacgtgagcccctttcccggcgccggcag
ctgctccgggagaactttgtggagacggagggcgagtttgtcttcgccacctctctggac
accaaggacgtcgagcagatcgccgagttcctggagcagtcggtgaaagactcctgcgag
gggctgatggtgaagaccctggatgtcgatgccacctacgagatcgccaagagatcgcac
aactggctcaagctgaagaaggactaccttgatggcgtgggcgacaccctggacctggtg
gtgatcggcgcctacttgggccgggggaagcgggccggccggtacgggggcttcctgctg
gcctcctacgacgaggacagtgaggagctgcaggccatatgcaagctcggaactggcttc
agcgacgaggagctggaggagcatcaccagagcctcaaggccctggtgctgcccagcccc
cgcccttatgtgcggatagatggtgccgtgactccggaccactggctggaccccagtgct
gtgtgggaggtgaagtgtgccgacctctccctctctcccatctaccctgctgcgcgcggc
ctggtggatagtgacaaggggatctcccttcgcttccctcggtttattcgagtccgtgaa
gacaagcagccagagcaggccaccaccagtgcacaggtggcctgtttgtaccggaagcaa
agtcagattcagaaccaacaaggcgaggactcaggctctgaccctgaagatacctactga
DBGET
integrated database retrieval system
