Colobus angolensis palliatus (Angola colobus): 105525891
Help
Entry
105525891 CDS
T08744
Symbol
DHX38
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16
KO
K12815
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16 [EC:
5.6.2.6
]
Organism
cang
Colobus angolensis palliatus (Angola colobus)
Pathway
cang03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cang00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105525891 (DHX38)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cang03041
]
105525891 (DHX38)
Enzymes [BR:
cang01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
105525891 (DHX38)
Spliceosome [BR:
cang03041
]
Complex C
Other components
Step II factors
105525891 (DHX38)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
HA2_N
AAA_22
AAA_19
T2SSE
nSTAND3
PhoH
Flavi_DEAD
AAA_30
Microtub_bd
AAA_16
AAA_7
Motif
Other DBs
NCBI-GeneID:
105525891
NCBI-ProteinID:
XP_011817072
Ensembl:
ENSCANG00000039299
UniProt:
A0A2K5JR21
LinkDB
All DBs
Position
Unknown
AA seq
1227 aa
AA seq
DB search
MGDTSEDASIHRLEGTDLDSQVGGLICKTKSAASEQHVFKAPAPRPSLLGLDLLASLKRR
EREEKDDGEDKKKSKISSYKDWEESKDDQKDAEEEGGDQAGRNIRKDRHYRSARVETPSH
PGGVSEEFWERSRQRERERREHGVYASSKEEKDWKKEKLRDRDYDRKRDRDDRDRSRHSS
RSERDGGSERSSRRNEPESPRHRPKDAATPSRSTWEEEESGYGSSRRSQWESPSPTPSYR
DSERSHRLSTRDRDRSVRGKYSDDTPLPTPSYKYNEWADDRRHLGSTPRLSRGRGRREEG
EEGISFDTEEERQQWEDDQRQADRDWYMMDEGYDEFHNPLAYSSEDYVRRREQHLHKQKQ
KRISAQRRQINEDNERWETNRMLTSGVVHRLEVDEDFEEDNAAKVHLMVHNLVPPFLDGR
IVFTKQPEPVIPVKDATSDLAIIARKGSQTVRKHREQKERKKAQHKHWELAGTKLGDIMG
VKKEEEPDKAVTEDGKVDYRTEQKFADHMKKKSEASSEFAKKKSILEQRQYLPIFAVQQE
LLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGYTDYGMIGCTQPRRVAAMSVAKRVSEE
MGGNLGEEVGYAIRFEDCTSENTLIKYMTDGILLRESLREADLDHYSAIIMDEAHERSLN
TDVLFGLLREVVARRSDLKLIVTSATMDAEKFAAFFGNVPIFHIPGRTFPVDILFSKTPQ
EDYVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSDQIVEHLEELENAPALAVLPIYS
QLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDAL
QIYPISQANANQRSGRAGRTGPGQCFRLYTQSAYKNELLTTTVPEIQRTNLANVVLLLKS
LGVQDLLQFHFMDPPPEDNMLNSMYQLWILGALDNTGGLTSTGRLMVEFPLDPALSKMLI
VSCDMGCSSEILLIVSMLSVPAIFYRPKGREEESDQIREKFAVPESDHLTYLNVYLQWKN
NNYSTIWCNDHFIHAKAMRKVREVRAQLKDIMVQQRMSLASCGTDWDIVRKCICAAYFHQ
AAKLKGIGEYVNIRTGMPCHLHPTSSLFGMGYTPDYIVYHELVMTTKEYMQCVTAVDGEW
LAELGPMFYSVKQAGKSRQENRRRAKEEASAMEEEMALAEEQLRARRQEQEKRSPLGSVR
STKIYTPGRKEQGEPMTPRRTPARFGL
NT seq
3684 nt
NT seq
+upstream
nt +downstream
nt
atgggggacaccagtgaggatgcctcgatccatcgattggaaggcactgatctggactct
caggttggtggtcttatttgcaagaccaaaagtgcagccagcgagcagcatgtcttcaag
gcccctgctccccgcccttcattactgggactggacttgctggcttccctgaaacggagg
gagcgagaggagaaggacgatggggaggacaagaagaagtccaaaatctcttcttacaag
gactgggaagagagtaaggatgaccagaaggatgccgaggaagagggcggtgaccaggct
ggccgaaatatccggaaagacagacattatcgatctgctcgggtagaaactccatcccat
ccagggggtgtgagcgaagagttttgggaacgcagtcggcagagagagcgggagcggcgc
gaacatggtgtctatgcctcatccaaagaagaaaaggattggaagaaggagaaattgcgg
gatcgagactatgaccgcaagagggacagagatgaccgggatagaagtaggcacagcagc
agatcggagcgagatggagggtcagagcgtagcagcagaagaaatgagcctgagagccca
cgacatcgacctaaagatgcagccaccccttcaaggtctacctgggaggaagaggaaagt
ggctatggctcctcaaggcgctcccagtgggaatcgccctccccgacgccttcctatcgg
gattctgagcggagccatcggctgtccactcgagatcgagacaggtctgtgaggggcaag
tactcggatgacacgcctctgccaactccctcctacaaatacaatgagtgggccgatgac
agaagacacttggggtccaccccacgtctgtccaggggtcgaggaaggcgcgaggaaggt
gaagaaggaatttcatttgacacggaggaggagcggcagcagtgggaggatgaccagagg
caagccgatcgggattggtacatgatggacgagggctatgatgagttccacaacccactg
gcctactcctctgaggactatgtgaggaggcgggagcagcacctgcataaacagaagcag
aagcgcatttcagctcagcggagacagatcaatgaggataatgagcgctgggagacaaac
cgcatgctcaccagtggggtggtccatcggctggaggtggacgaggattttgaagaggac
aatgcagccaaggtgcatctgatggtgcacaatctggtgcctccctttctggatgggcgc
attgtcttcaccaagcagccggagccggtgattccagtgaaggatgccacttctgacctg
gccatcattgctcggaaaggcagccaaacagtgcggaagcacagggagcagaaggagcgc
aagaaggctcagcacaaacactgggaactggctgggaccaaactgggagatataatgggc
gtcaagaaggaggaagaaccagataaagctgtgacggaggatgggaaggtggactacagg
acagagcagaagtttgcagatcacatgaagaaaaagagcgaagccagcagtgaatttgca
aagaagaagtccatcctggagcagaggcagtacctgcccatctttgcagtgcagcaggag
ctgctcactattatcagagacaacagcatcgtgatcgtggttggggagacagggagtggt
aagaccactcagctgacacagtacctgcatgaagatggttacacggactatgggatgatt
gggtgtacccagccccggcgcgtagctgccatgtcagtggccaagagagtcagtgaagag
atggggggcaaccttggtgaggaggtgggctatgccatccgctttgaagactgcacttca
gagaacaccttgatcaaatacatgactgatgggatcctgctccgagagtccctccgggaa
gccgacctggatcactacagcgccatcatcatggatgaggcccacgagcgctccctcaac
actgatgtgctcttcgggctgctccgggaggtggtggctcggcgctcagacctgaagctt
atcgtcacatcagccacgatggatgcagagaagtttgctgccttttttgggaatgtcccc
attttccacatccctggccgtaccttccctgttgacattctcttcagcaagaccccacag
gaggattacgtggaggctgcagtgaagcagtccttgcaggtacacttgtcgggggcccct
ggggacatccttatcttcatgcctggccaggaggacattgaggtgacctcagaccagatt
gtggagcatctggaggaactggagaatgcacctgccctggccgtgctgcccatctactct
cagctgccttctgacctccaggccaaaatcttccagaaggctccagatggcgttcggaag
tgcattgttgccaccaacattgccgagacttctctgactgttgatggcatcatgtttgtt
atcgattctggttattgcaaattaaaggtcttcaaccccaggattggcatggatgctctg
cagatctatcccattagccaggccaatgccaaccagcggtcagggcgagccggcaggacg
ggtccaggtcagtgtttcaggctctacacccagagcgcctacaagaatgagctcctgacc
accacagtgcccgagatccagaggaccaacctggctaacgtggtgctgctgctcaagtcc
cttggggtgcaggacctgctgcagttccacttcatggacccgcccccggaggacaacatg
ctcaactccatgtatcagctctggatcctcggggccctggacaacacaggtggtctgacc
tctaccgggcggctgatggtggagttcccgctggaccctgccctgtccaagatgctcatc
gtgtcctgtgacatgggctgcagttccgagatcttgctcatcgtctccatgctctccgtc
ccggccatcttctacaggcccaagggtcgagaggaggagagtgatcaaatccgggagaag
ttcgctgtccctgagagcgatcatttgacctacctgaatgtctacctgcagtggaagaac
aataattactccaccatctggtgtaacgatcatttcatccatgctaaggccatgcggaag
gtccgggaggtgcgagctcaactcaaggacatcatggtgcagcagcggatgagcctggcc
tcgtgtggcactgactgggacatcgtcaggaagtgcatctgtgctgcctatttccaccaa
gcagccaagctcaagggaatcggggagtacgtgaacatccgcacagggatgccctgccac
ttgcaccccaccagctccctttttggaatgggctacaccccggattacatagtgtatcac
gagttggtcatgaccaccaaggagtacatgcagtgcgtgaccgctgtggacggggagtgg
ctggcggagctgggccccatgttctatagcgtgaaacaggcgggcaagtcacggcaggag
aaccgtcgtcgggccaaagaggaagcctctgccatggaggaggagatggcgctagccgag
gaacagctgcgagcacggcgccaggagcaggagaagcgcagccccctgggcagtgtcaga
tctacgaagatctacactccaggccggaaagagcaaggggagcctatgacccctcgccgc
acgccagcccgctttggtctgtga
DBGET
integrated database retrieval system
