Capsicum annuum (peppers): 107839443
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Entry
107839443 CDS
T04646
Name
(RefSeq) LOW QUALITY PROTEIN: multisubstrate pseudouridine synthase 7
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
cann
Capsicum annuum (peppers)
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cann03016
]
107839443
Enzymes [BR:
cann01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
107839443
Transfer RNA biogenesis [BR:
cann03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
107839443
Prokaryotic type
107839443
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-GeneID:
107839443
NCBI-ProteinID:
XP_016538413
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All DBs
Position
8:complement(150143050..150157424)
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AA seq
726 aa
AA seq
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MLKTLCSEPRKSVQQIVWSXPKILKPYYYYYRFLDHIFFPAMKSMDECDVGISCYISNLP
GFRGILKQRYSDFIVNEVDLDENVVHLTSLEAPNECSETKDVNISDQLNRSSVTEIESFR
SLAGNSDAEKLKVFIDELNSGVDVSDESIVLSPSADKSHRTAIHNFFKEKLKFLVTDTID
GIEDQSKCVRVRLNKGGNNGRGRNSRKRKERDDKRYDSRGSDSYPGHLGKFLRFHLFKEN
KDTQEALNVIAKMLGIQSRSFGFAGTKDKRAVSTQRVTVFKQQASKLAALNKRLIGIKVG
DFCHVKEGLLLGQLYGNRFTITLRGVSAESEDIIKASAVALGKHGFINYFGLQRFGSSSV
PTHLIGAALLRGEWKAAVSLILDPREGEKNAISTVREYYKESGDVDGTLRQLPRYLVAEK
AILQCLKRSPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASMRVQKHGFDQVVLGDLVY
SKEPHIVKETFVAECEDVNGNNMDDYSNLDETSETDLPEERNIPVKVINEEDLKSGTYTI
DDVLLPLPGSRVIYPSNDIGEVYRDLAQKDGISLTETAHKIKEFSITNMTGAYRRVFQKP
KDFEWELLSYTDGTVPLADTDLDVIAKSVKKSKVREEDSANGSEELPAESSAISVGGDMV
TGKGHEEKINSESGMQSEKSHSGGNAESQMALKLSFTLPASCYATMAVRELLKTSTSVAF
HKSLND
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgctaaaaactctttgttccgaaccaagaaaaagcgtgcaacagatagtttggtcannc
cctaaaatcctaaaaccctactactactactacagatttcttgatcacatcttttttcct
gcaatgaaaagtatggatgaatgtgatgtaggtatctcctgctacatctccaacctccct
ggcttccgtggcatcctcaaacaaaggtactccgacttcattgtaaatgaagtggacttg
gatgaaaatgttgttcatctgacttcgttggaggctccaaatgagtgttcagagaccaag
gatgtgaatatatctgatcaactgaatagaagttctgtgactgagatagagtctttcaga
tctctcgctggcaattctgatgctgaaaagcttaaggtttttattgatgaacttaattct
ggggttgatgtcagtgatgaatctatcgtcctttcaccaagtgcagataaatcgcatcgg
actgcaattcataactttttcaaggaaaaattaaaattccttgtaacagatacaattgat
ggaatagaggaccaatcaaagtgtgttcgtgtgagattgaataagggagggaataatgga
agaggtagaaactctaggaaaaggaaagagcgggatgataaacgttatgacagtagaggt
tcagacagttatccaggacatcttggcaagttcctcaggtttcatcttttcaaggagaat
aaggatacacaggaagctttaaacgttatagcaaagatgcttggcattcagtctaggtcc
tttggatttgctggtactaaagataagcgtgctgtttcaacccagagggtaactgttttc
aagcaacaagcaagtaagttagcagctctcaacaaaaggttgattggaatcaaagtcggt
gacttttgccatgttaaagaagggcttctgcttgggcagctttatgggaaccgatttact
ataacacttaggggagtgtcagcagagtctgaggatataattaaagcatcagcagttgcc
ctaggaaaacatgggtttataaactattttggtttacagcggtttggcagcagttctgtg
ccaacccatctaattggagctgcgttattgcgtggagagtggaaagctgctgtcagtttg
attcttgatccaagagaaggggagaagaatgccatcagtacagtaagggagtattacaag
gaaagtggtgacgttgatgggactctaaggcagttacctcgttatctggttgctgaaaag
gcgattttgcagtgcctgaaaagatctcctggaaactatctacaagctctgaaggctata
cccaggactctccgaatgatgtatgtccatagctatcaaagttatctttggaatcatgcg
gcaagcatgagagtgcaaaagcatgggtttgaccaagttgtgttgggagatttggtgtat
tcaaaagaaccgcatattgtgaaagaaacttttgttgctgaatgtgaagacgtgaatggg
aataacatggatgattacagcaatctggatgagacctcagagactgatcttcctgaagaa
agaaatataccagtcaaggttataaatgaagaagaccttaaatctggtacatataccatt
gatgatgtacttctacctttgccggggtctagagttatttatccatcaaatgacattggt
gaagtttaccgtgacttggcacagaaggatggtattagcttgacagagactgcacataag
atcaaggaattctccataaccaatatgaccggagcttacagacgcgtgtttcaaaagcca
aaggattttgaatgggaattgcttagttacactgatggaactgtacctctagctgataca
gatttggatgtcattgccaagtcagtaaagaaaagcaaggttagagaggaggactcggcc
aatggaagcgaggaacttcctgctgaatcttcagcaatctctgtaggtggtgacatggtt
acaggaaaaggacatgaggaaaagattaacagtgaatcagggatgcaatcagagaaatct
catagtggtggtaatgccgagagccagatggctctcaagctgagctttacactaccagct
tcttgctatgcaactatggctgtgagggagctgctgaaaacatccacttccgttgcattt
cacaagtcactaaatgattaa
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