Capsicum annuum (peppers): 107847458
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Entry
107847458 CDS
T04646
Name
(RefSeq) ubiquitin C-terminal hydrolase 13 isoform X1
KO
K11838
ubiquitin carboxyl-terminal hydrolase 7 [EC:
3.4.19.12
]
Organism
cann
Capsicum annuum (peppers)
Pathway
cann03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
107847458
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cann01002
]
107847458
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cann04121
]
107847458
Enzymes [BR:
cann01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
107847458
Peptidases and inhibitors [BR:
cann01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
107847458
Ubiquitin system [BR:
cann04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
107847458
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP7_ICP0_bdg
UCH
USP7_C2
MATH
UCH_1
Nitroreductase
Malt_amylase_C
Motif
Other DBs
NCBI-GeneID:
107847458
NCBI-ProteinID:
XP_016547209
LinkDB
All DBs
Position
11:complement(224047962..224085095)
Genome browser
AA seq
1115 aa
AA seq
DB search
MTIMNPLPTDQEDEEMLVPRSDLVFEGPQPMEAQPEIGNDVEKQPPEDPQTSRFTWKIDN
FSRLNIKKLYSDTFVVGGYKWRILIFPKGNNVDYLSMYLDVADSANLPYGWSRYAQFSLS
VVNQIHNKYSIRKETQHQFNARESDWGFTSFMPLGELYDPNRGYIVDDACVIEAEVAVRK
IVDYWSYDSKKETGFVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDMPSASIP
LALQSLFYKLQYSDNSVATKELTKSFGWDTYDSFLQHDVQELNRVLCEKLEEKMKGTVVE
GTIQQLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCADVYASFDKYVEVERLEGDN
KYHAEQFGLQDAKKGVLFIDFPPVLQLQLKRFEYDFSRDTMVKINDRYEFPLQLDLDREN
RKYLSPEADGSVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDERVTKEDVKR
ALEEQYGGEEELPQTNPGFNNAPFKFTKYSNAYMLVYIRESDKDKIMCSVDEKDIADHVR
ARLQREQEDKEQKKKEKAEAHLYTIIKVARDEDLKQQIGKDIHFDLVDHDKVRSFRIQKQ
TPFSIFKEEVAREFGVPVQFQRFWLWAKRQNHTYRPNRPLTHLEEAQTVGQLREVSNKVQ
NAELKLFLEVELGLDLRHIPPPDKTKDDILLFFKIYDPEKEELRYAGRLFVKGTSNPTEI
LNKLNEMAGYAPDQEIELYEEIKYEPIVMCELIDKKFAFRSSQLEDGDIVCYQKFLSPEN
RQKFRYPDVPSFLEYVYNRQAVHFRSLEKSKEDDFCLELSKTNTYDEVVERVAQQLGLDD
PSKIRLTPHNCYSQQPKPQPIKYRGVDTLADMLVHYNQTSDILYYEVLDIPLPELQGLKT
LKVAFHHVTKDEVVTYTIRLPKQSTVGDVINDLKKKVELSNPDAELRLLEVFYHKIYKIF
HTSEKIENINDQYWTLRAEEIPEEEKNLGPVDRLIHVYHFTKETAQNQMQIQNFGEPFLM
VIYEGESLAQVKVRIQKKLQVPDEDFAKWKFAFLSLGRPEYLEDSDILSNRFQRRDVYGA
WEQYLGLEHPDNAPKRIHAAYQNRHTYEKPVKIYN
NT seq
3348 nt
NT seq
+upstream
nt +downstream
nt
atgaccattatgaatcctcttcctactgatcaagaagatgaggagatgcttgttccacgt
tcagatttggtatttgaaggacctcagcctatggaagcacaaccagaaattggcaatgat
gtggaaaagcagccaccagaggatcctcaaacttcaaggtttacttggaagatagataac
ttctctaggttgaatataaagaaactatactctgacacctttgttgttggtggctataaa
tggcggattttaatttttcccaagggaaacaatgttgattacctgtccatgtatctggat
gttgctgattcggctaatttaccttacgggtggagtagatatgctcagttcagcttgtca
gttgttaaccaaattcataacaagtactccatcagaaaagagacacaacaccaattcaat
gccagagaaagtgattggggtttcacatcttttatgccacttggtgaactatatgatcca
aacagaggttacattgttgatgatgcatgtgttattgaggctgaggttgctgtccgaaaa
attgttgactattggtcatatgactcaaaaaaagaaactggctttgttggactgaagaac
caaggagctacctgctatatgaactcgcttctccaaactctctatcatattccctacttc
aggaaggctgtataccacatgcccacaactgaaaatgatatgccctctgctagtatacct
ctagcgttgcaaagcttattctataagctccagtacagtgacaacagtgtagctacaaag
gagttgacaaaatcattcggatgggacacatatgattctttcttgcagcatgatgtgcaa
gaactcaatcgtgttctctgtgaaaaacttgaagagaaaatgaagggaactgttgtcgaa
ggcactatacagcagttatttgaagggcaccatatgaactatattgagtgcatcaatgtg
gactacaaatctacaagaaaggagtcattttatgatcttcagcttgatgtcaaaggatgt
gctgatgtttatgcttcttttgataaatatgttgaagttgaacgtcttgagggcgataac
aaataccatgcagaacaatttggtttgcaggatgctaagaagggtgtcttattcattgat
ttcccccctgtcctgcagcttcagttgaagcgctttgaatatgatttttcgcgagacact
atggtaaagataaatgacagatatgagttccctctgcaactggatctagatagagagaat
cgtaaatatttgtcacctgaggctgatggaagtgtcagaaacctgtacacacttcacagc
gtattagtccacagcggtggtgtgcatggtggacactattatgctttcataaggccaaca
ctttcagatcaatggtataaatttgatgatgaacgcgtgacgaaagaagatgtgaaaaga
gctctagaagagcagtatgggggtgaagaagagttgccacagacaaatcctggattcaat
aatgctcccttcaaatttacgaagtactcaaatgcttacatgctggtctatatacgggaa
agtgacaaggataaaataatgtgtagtgttgatgaaaaggacattgctgatcacgtcagg
gcaaggttacagagagaacaagaagataaagagcagaagaagaaggagaaagcagaggca
cacctttacacaattataaaggttgctcgtgatgaagacctcaaacagcagattgggaag
gacatacattttgatttagtggatcatgacaaagttaggagttttcgcattcagaagcaa
acaccttttagcatttttaaggaggaggttgccagagaatttggtgtaccggtgcaattt
caacgtttttggctatgggcgaagcgccagaatcatacatatcgtccaaaccggccattg
acacatctcgaagaagctcaaactgttgggcagttgagggaagtatcaaataaggttcaa
aatgcagagctaaaattgttcttggaagtggagcttggactggatttgagacacatccct
ccacctgacaagactaaagatgatattctgctattcttcaagatttatgatcctgagaaa
gaggagctgaggtatgccggaagactctttgtaaagggaacgagtaatccaactgaaatc
ttgaacaaactaaatgaaatggctggatatgcccctgatcaagagattgaactttatgag
gaaataaaatatgaaccgattgtcatgtgtgaactcatagacaagaaatttgctttccga
tcgagccagcttgaggatggtgacatagtatgctatcagaaattcctttctcctgaaaat
cgccaaaagttccggtatcctgatgttccttctttcctggagtatgtttacaatcgccag
gctgttcacttccgatccttagaaaagtcgaaggaggatgatttctgtttagagctgtca
aagactaatacatatgatgaagttgtggaaagagtagcccaacaacttggcttggatgat
ccatctaaaattaggctcacaccccataattgttactctcagcaacctaaaccgcagcca
attaagtaccgaggtgtagacacccttgcagatatgctggtccactacaatcagacatct
gatattttgtactatgaagtactggacattcctttgccagaactgcaaggtttaaaaacc
ttgaaagttgcttttcatcatgttaccaaagatgaagtggtcacttacactatcagattg
ccaaaacaatctactgtgggtgatgtaattaatgatctgaagaaaaaggttgagttgtca
aatccagatgcagaattaagattgctagaggtcttctaccacaagatttataagatattt
catacaagtgagaagatagagaacataaatgaccagtactggacattacgggccgaagag
attcctgaagaagagaaaaatctaggcccggttgatcgtttgattcatgtgtatcacttc
actaaagagactgcacagaaccaaatgcaaattcagaatttcggggaaccttttctcatg
gttatctatgagggtgaaagtttagctcaggtgaaggtgcgaatacagaagaaattgcag
gtcccagatgaagattttgctaagtggaaatttgcgttcctctcacttggccgccctgag
taccttgaggactcggatatattgtccaaccgtttccagcgaagggatgtttatggtgcc
tgggagcagtatcttggcttggaacatcctgacaatgcccctaaaaggattcatgcagca
tatcagaatcgccacacgtacgagaagcctgttaaaatttacaactag
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integrated database retrieval system
