KEGG   Capsicum annuum (peppers): 107850262
Entry
107850262         CDS       T04646                                 
Name
(RefSeq) pre-mRNA-processing protein 40A
  KO
K12821  pre-mRNA-processing factor 40
Organism
cann  Capsicum annuum (peppers)
Pathway
cann03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cann00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107850262
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cann03041]
    107850262
Spliceosome [BR:cann03041]
 Complex A
  U1 snRNP components
   U1 related factors
    107850262
 Complex B
    107850262
SSDB
Motif
Pfam: FF WW
Other DBs
NCBI-GeneID: 107850262
NCBI-ProteinID: XP_047257726
LinkDB
Position
12:232078677..232097870
AA seq 1021 aa
MRGLSGSPGKRAVNLVSEQFRTLASLRNYLAPPLAAALPPRLFSAGALRLMFHLDISYSF
PIKPPIPPLAGPALGAIPSMSLQEFQPILPAQQAQPYGSGSSQQFQPLGHANVAMPQPSQ
IQFPQPMQQVTGRPVVGRHSMPQGPPIPQDFQRNLPMSNNHMPGSGGPNLPLSSYNQVNA
DSSASQYQTQINDHRFPSGVQPWMPISNHNVNSVTTMQKTGELAAPLVVPEANYVFDPVE
TIQSDWIEHTSRKGKKYYYNRRTRISTWEKPQELMTEMERADASTDWREFTSPEGRKYYY
NKVTRTSKWRMPDEVKLAREKDSISHASDFGSIPVVKTSSPGADGSLVSVRGAKSSPIAV
SPAANLLTSFASESSSLSGKVSSMMIETVEMKNSSEPSLPAVADSEKIGIAVTLGNSVAP
PVSETTSAQDAVVYDDGFSPENREDVKKDAAITEIGGATPSDEKTVELGPLVYESKAEAK
SAFKTLLESANIGSDCTWDQAMRAVINDWRYGALKSLGERKQAFNEYLSQKKKLEAEERR
VKQKKAREDFRIMLEDCKELSPSSRWSKAISLFEHDERFKAVERAKDREDLFEDYVEELE
KKEHAKALEEQKRNRVEYLEFLKSCDFIKASSQWRKVQDRLEADERCSRLEKIDRLEIFQ
EYIRDLESKEEEQRKLRMEELRKAERKNRDEFRKLMEEHVAAGILNAKTNWRDYCIKIKD
FAAYLAVSSNTSGSTAKDLFTDVMDELEKQYLDDKSQIKDAVRMAEIGLTSAWTLDDFKV
AIAKYISSPPMSDTNLKFVFDELLERAREKEEKEAKKRKRLADEFYELLHASKEITASSK
WEDCKSLFGDRIMSDEGLLLEIFDKFVNELKEKERKRQEDKARKEKEREKKKEKNRRDKG
RGDKSRRERRTEKDGTGIDKADTYSFEEIRRSGSDRDKKHRKRHMSSFDDDAENEKDHSR
SSYRHDSDHKKLKQMDRHDVWSLEGKPEGQHKKQKRDRRSDSHRDGDYEDHWQFGEDGEV
Q
NT seq 3066 nt   +upstreamnt  +downstreamnt
atgcgcggccttagtgggagtccaggcaaaagggcggtgaatctagtttcagaacaattc
cgaactttggcttcgttgcgaaattatctggctccgcctctcgctgcggcattgccgccg
aggttgttttccgccggcgctcttcgtttaatgtttcatctggatattagctactctttt
cctataaagcctcctatacctcctctggctggtcctgctcttggtgctattccatccatg
tcactgcaggagttccagcctatacttccagcccagcaggcacaaccatatggttccggg
tcatctcaacaatttcagccacttggacatgcaaatgttgcgatgcctcaaccttcacaa
atccaatttcctcaacctatgcaacaggttactggtcgacctgtagtaggcaggcatagt
atgcctcagggaccacctattccccaggattttcagcgaaatcttccgatgtcaaataac
cacatgcctggttctggtggcccaaatttacctctttcttcatataatcaggtaaatgct
gattcttctgcctcccagtatcagacacagataaatgatcataggtttccatcaggggta
caaccctggatgccaataagtaatcataatgtgaattctgtgacaactatgcaaaagact
ggagaattagcagctcccttggttgttccggaagcaaattacgtatttgaccctgttgag
actattcagtcagattggattgagcacacttctcggaaggggaaaaaatactattataat
agaaggacaagaatctctacctgggagaaacctcaagagctgatgacagaaatggagagg
gcagacgcatcaactgactggagagaatttacaagtcctgagggaagaaagtattactac
aacaaggttactagaacgtccaaatggagaatgcctgatgaagtcaagttggctcgtgaa
aaggacagcatttcgcacgcttctgattttggatccattcctgttgttaaaacatcatcc
ccgggtgcagatggttcattagtctcagtacgcggtgctaaatcaagcccaattgctgtg
tcaccagctgctaacttactaactagttttgcttcagaatcatcaagtttatctggtaag
gtttcttcgatgatgattgaaacagtcgaaatgaagaattcttcagaaccttctttgcca
gctgttgctgattcggagaaaattggaatagcagtaaccttgggaaattctgtcgcgcca
ccggtttctgagactacttcagctcaagatgcagtagtgtatgatgatggattttctccg
gagaatagagaggatgtcaagaaagatgctgcaataactgaaatcggaggtgctactcca
tcagatgagaaaacagtcgagctgggaccattagtttatgagagcaaagcggaggcaaag
agtgcattcaaaacacttttggaatctgcaaatattgggtctgattgcacttgggatcag
gccatgagagcagtaattaatgactggagatatggtgctctaaaatcccttggtgagcgg
aagcaagcttttaatgagtatctgagccaaaagaaaaaactggaagctgaagagaggcgt
gttaaacagaaaaaagctcgggaagatttcaggataatgttagaagattgcaaggagctg
tcaccatcgtcaagatggagtaaggcaatctccctattcgaacatgatgaacgttttaaa
gctgtcgagcgagctaaagaccgtgaggacctttttgaagattatgtggaggaacttgag
aaaaaggagcatgcgaaggcattggaggagcagaagcgcaatagagtggagtacttagaa
tttttaaaatcctgtgactttattaaggccagtagccagtggcggaaagttcaggaccgc
ttggaagctgatgaaagatgctcccgccttgagaaaatcgaccgcttggagattttccag
gaatatatacgtgatttagagagcaaagaggaggagcaaaggaaactgcggatggaagaa
ttgaggaaagctgaacgtaaaaatcgtgatgagttccgaaaactgatggaagagcatgtt
gctgcgggaatacttaatgcaaaaactaactggcgtgattattgcatcaaaattaaagat
tttgctgcatatctggctgtctcatcaaatacttcaggatcaacagcaaaagatttattt
acagatgttatggatgagctggagaaacagtatcttgatgacaagtcacaaattaaagat
gcagttaggatggccgagattggattgacatcagcgtggacgcttgatgattttaaggtt
gcaatcgccaagtatattagctctccaccaatgtcagataccaacttaaagtttgtcttt
gacgagttactggaaagggccagggagaaagaagaaaaagaagctaaaaagcgtaaacgt
ctagcagatgagttctatgaacttcttcatgcatcaaaggaaattactgcatcatcgaaa
tgggaggactgcaaatccctcttcggagatagaataatgagtgatgagggcttgctgctt
gaaatatttgacaaatttgttaatgaactaaaagagaaggagcggaagcgtcaagaggat
aaggcaagaaaagagaaggaaagagaaaagaagaaggaaaaaaatagaagggataaaggc
cgaggggataaaagcaggagagagagaagaaccgagaaagatggtacaggcatcgacaag
gctgatacttacagtttcgaggagatcagaaggtcaggaagtgacagagataagaaacac
cgcaagcggcatatgagttcctttgatgacgacgctgaaaatgagaaagatcattcaaga
agttcgtacagacatgacagtgatcataagaagctaaaacagatggaccggcatgatgtc
tggagtttggaaggtaaaccggagggccagcataagaaacaaaagcgagatcgtcggagt
gattctcatagggatggtgactatgaggatcactggcaatttggtgaggatggagaagtt
cagtag

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