Capsicum annuum (peppers): 107850553
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Entry
107850553 CDS
T04646
Name
(RefSeq) isoleucine--tRNA ligase, cytoplasmic isoform X1
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
cann
Capsicum annuum (peppers)
Pathway
cann00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
107850553
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cann01007
]
107850553
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cann03016
]
107850553
Enzymes [BR:
cann01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
107850553
Amino acid related enzymes [BR:
cann01007
]
Aminoacyl-tRNA synthetase
Class I (U)
107850553
Transfer RNA biogenesis [BR:
cann03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
107850553
Prokaryotic type
Other AARSs
107850553
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
DUF5915
tRNA-synt_1g
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
107850553
NCBI-ProteinID:
XP_016550645
UniProt:
A0A1U8F4P4
LinkDB
All DBs
Position
12:1690641..1704311
Genome browser
AA seq
1105 aa
AA seq
DB search
MEDICEGKDFSFPNEETKILKWWETAKAFETQLEKTRNKPEYIFYDGPPFATGLPHYGHI
LAGTIKDIVTRYQSMTGHHVTRRFGWDCHGLPVEHEIDEKLGIKMKQQVIDMGIDKYNEE
CRSIFTRYVGEWEKTVVRMGRWIDFENGYKTMDLKFMESVWWVFAQLYQKGLVYRGFKVM
PYSTGLKTPLSNFEANSNYKEVSDPEIMVSFPIVDDPEGASFVAWTTTPWTLPSNLALCV
NANFVYVKVRNKFNGKIFVVAESRLSELPVEKAKKVMPNGPAADAQTPNSKTKTSGGKSK
NTETYEVMDKFPGSSLVGKKYIPLFDYFKDFSDSAFRVVADDYVTSDSGTGIVHCAPAFG
EDDNRVCIENGIIKKGESLIVAVDDNGRFTERITDFRDKYVKEADNDITQAVKDKGRLVK
SGKFMHSYPFCWRSDTPLIYRAVPSWFIMVEKIKDQLLENNKQTYWVPDFVKEKRFHNWL
ENARDWAVSRSRFWGTPLPVWVSEDGEEIVVMDSIETLEKLSGAKVTDLHRHYIDHITIP
SRRGPEFGVLRRVEDVFDCWFESGSMPYAYIHYPFENVELFENNFPGHFVAEGLDQTRGW
FYTLMVLSTALFGKPAFRNLICNGLVLAEDGKKMSKRLKNYPQPSEVINDYGADALRLYL
INSPVVRAEPLRFKKEGVFAVVKDVFLPWYNAYRFLVQNAKRLEIDGFGPFIPTDQKTLR
CSSNVLDQWINSATQSLVHFVRQEMDAYRLYTVVPYLLKFLDNLTNIYVRFNRKRLKGRT
GEGDCRTALSTLYFVLLTACKAMAPLTPFFTEVLYQNLRKVCKGSEESIHYCSYPEVEGE
RWERIEQSVNRMMTIIDLARNIRDRHSKPIKTPLREMVVVHPDSEFLDDIAGKLREYVLE
ELNIKSLVPCNDTLKYASLRAEPDFSVLGKRLGKSMGVVAKEVKAMSTADIIAFEKAGEI
TIASHTLKLSDIKIVRGFKRPDNMKDDEIDAAGDGDVLVILDLGVDDSLVEAGVAREVVN
RIQKLRKKAGLEPTDMVEVFFKSLDDDKTVSEQILKSQESYIKGSIGCPLLRAEAISSNA
ITIAEESFHGISNLSFVITLARPSQ
NT seq
3318 nt
NT seq
+upstream
nt +downstream
nt
atggaagatatatgtgaaggcaaagatttctcttttccaaatgaagaaacaaaaattctc
aaatggtgggaaaccgcaaaagccttcgaaacccagctcgaaaaaacccgaaacaaaccc
gaatacattttctacgacggtccaccatttgctaccgggttgcctcattacggtcatata
ttagctggtacgatcaaggacattgtgacccggtatcaatccatgacgggtcatcatgtg
acccgaagatttggttgggattgtcacgggttacctgttgaacatgaaattgatgagaaa
cttgggattaagatgaagcaacaagtgattgatatggggattgataagtataatgaggag
tgtaggtcaatatttacgaggtatgttggcgagtgggagaagacggtggtgaggatgggg
aggtggattgattttgagaatgggtataagactatggatttgaagtttatggagagtgtt
tggtgggtttttgctcagttgtatcaaaaggggctcgtttatcgtggcttcaaggttatg
ccttatagtactggtttgaagactcctttatccaattttgaagctaattcaaattacaag
gaagtaagtgacccagaaatcatggtttccttcccgatagtcgatgatcccgagggtgca
tcctttgttgcttggaccacaactccttggactcttccaagtaatcttgctctttgtgtt
aacgccaattttgtatacgtcaaggttcgcaataaattcaacgggaagatttttgtggtg
gcggagtctcgattgtccgagctaccagttgagaaggcgaaaaaggtcatgccaaatgga
cctgctgctgatgctcaaaccccaaattctaagacaaagacctctggtggtaaatcaaag
aatacggaaacgtatgaggtgatggataaatttcctgggtcgtcccttgtggggaagaag
tacattcctctattcgattacttcaaagatttttctgattcagcattcagagtcgttgcg
gatgattatgtgacatctgacagtggtactggaattgttcattgtgctcctgcctttggt
gaggacgacaatcgtgtttgtatagaaaatggcataatcaagaagggggagagcttgatt
gtggcggtagatgataatggccgctttactgagagaattactgacttcagagacaaatac
gttaaggaagcagataatgatatcacgcaagcagtgaaggataaaggaagactagttaaa
tctggaaagtttatgcattcttaccctttttgctggagatctgacacacctctgatttac
agagcagttcctagctggtttattatggtggaaaagattaaggatcaattgttagagaac
aataagcaaacctactgggttcctgattttgtgaaggaaaaacggttccacaattggtta
gaaaatgcaagggactgggctgttagccgaagtaggttctggggtactcctcttcctgtg
tgggttagtgaggatggtgaagagatagttgttatggactccattgaaacactggaaaag
ctctctggtgctaaggtgactgacttgcatcggcactatattgatcacattaccatccca
tcccgtcgggggcctgaatttggcgttcttcgacgcgtggaggatgtatttgattgctgg
tttgaaagtgggtcaatgccttatgcttatatccactatccttttgagaatgttgagctc
tttgagaacaatttccccggtcattttgtggcagaaggtctcgatcaaactcgtggatgg
ttctacacccttatggtcctttccaccgccctttttgggaaacctgctttcagaaacctc
atttgcaatggtcttgtcctggctgaagatgggaagaagatgagtaaacgattaaagaac
tatcctcaaccatcagaagttatcaatgattatggagctgatgcattgcgtttatacctg
ataaactctcccgttgtccgtgctgaacctctgcgctttaagaaagagggagtttttgct
gtggtgaaagatgttttcttgccatggtataatgcatataggttccttgttcagaatgca
aaaagacttgagattgatgggtttggaccattcattcctactgatcaaaaaactttgcgg
tgttcttcgaatgtcctagaccagtggatcaattctgcaactcagagcttagtccatttc
gttcggcaagaaatggatgcttatagattgtacacggtggttccgtatctcctaaagttt
cttgataatttaactaatatctatgtgcggttcaatcggaagagactaaaaggccgtact
ggtgagggagactgcagaactgctctttcaactctttactttgtgcttctgactgcatgt
aaagctatggcgccactaactcctttcttcaccgaggttctttaccaaaatttgcggaaa
gtttgcaaaggatcagaggagagcattcactattgcagctatcctgaagtggaaggggag
aggtgggagcgtattgagcagagtgttaataggatgatgacaattattgaccttgcacga
aatattcgtgatcgtcacagcaaacctattaaaactccgctaagggaaatggtggttgta
catccggattcagaattccttgatgacattgcgggcaaactaagagagtatgtactcgaa
gagctaaacattaagtctttggtcccatgcaatgatacattgaagtatgcttctctgcgt
gcagagccagatttcagtgtgttaggaaaaaggttggggaagtcgatgggtgttgttgcc
aaggaagttaaggccatgtcaacagcagatattattgcttttgagaaagcgggagaaatt
acaattgcttcacatactttgaagcttagtgatatcaagattgttcggggttttaaacgt
cctgataatatgaaggacgatgaaatcgatgcggcaggggatggtgatgttttggtgata
ctggatttgggtgttgatgattcactcgttgaggctggagttgctcgggaggttgtgaat
aggatccagaaactgagaaagaaagccgggcttgaacccactgacatggtagaggttttc
ttcaagtctttggatgatgataaaacagtttctgagcagattttgaagtctcaggaatca
tacattaaaggcagcattggatgtcctttgcttcgtgctgaagcgatctcttcaaatgca
ataactattgctgaagagagtttccatggaatctcaaacttgtcctttgtgatcacctta
gcaagaccaagtcaatag
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