Capsicum annuum (peppers): 107851186
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Entry
107851186 CDS
T04646
Name
(RefSeq) histone deacetylase 6
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
cann
Capsicum annuum (peppers)
Pathway
cann03082
ATP-dependent chromatin remodeling
cann03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
107851186
03083 Polycomb repressive complex
107851186
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cann03036
]
107851186
Enzymes [BR:
cann01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
107851186
Chromosome and associated proteins [BR:
cann03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
107851186
HDAC complexes
Sin3A-HDAC complex
107851186
BRAF-HDAC complex
107851186
REST complex
107851186
SHIP complex
107851186
MiDAC complex
107851186
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
107851186
Heterochromatin formation proteins
Other heterochromatin formation proteins
107851186
Chromatin remodeling factors
NuRD complex
107851186
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
107851186
NCBI-ProteinID:
XP_016551602
UniProt:
A0A1U8EWM8
LinkDB
All DBs
Position
6:complement(211911390..211915503)
Genome browser
AA seq
471 aa
AA seq
DB search
MDSSTVDGGASLPSTGTDGKKRRVSYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYYL
HRRMEISRPFPAGDDDIRRFHSSDYVDFLSSVSPETLHDHTHARHLKRFNVGEDCPVFDG
LFGFCQASAGGSIGAAVKLNRQDADIAINWAGGLHHAKKSEASGFCYVNDIVLGILELLK
VHKRVLYIDIDIHHGDGVEEAFFTTDRVMTVSFHKFGDFFPGTGHIKDIGANQGKYYALN
VPLNDGMDDESFGRLFRPTIQKVMEVYQPDAVVLQCGADSLAGDRLGCFNLSVKGHADCL
RYLRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPENKLPYNEYYEYFGPDYTLHV
EPNPMENQNSPRDLEKIRNILLEQLSQLPHAPSVPFQTTPSTTEVPEEKEENMDRRPKPR
IWNGEGYESDADEDEKPRQRSSDSNLTPVESSDMRDVDNQANGDDMVDDHS
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atggactcctccaccgtagacggcggtgcatcgcttccctctaccggcaccgacggtaag
aaacgccgtgtctcttatttctacgagccaacaatcggcgactattactacggtcaaggt
catccgatgaagcctcaccgtattcgtatggcccataatctcatcgtccactattatctc
caccggcgtatggaaatcagccgtccttttcccgccggagacgatgatatccggaggttt
cactcgtcggactatgtcgattttctctcttccgtttcgcctgagacgttacatgaccat
acacatgcgcggcatctgaagaggtttaatgttggtgaagattgcccggtttttgatgga
ctttttgggttttgtcaagcgtcggctggtggatctattggtgcggcggttaagctgaat
aggcaggatgcggatatagcgattaattgggctggtggattgcaccatgcaaagaaaagt
gaagcttctggattctgttatgtgaatgatattgttttgggtattctcgagctgcttaaa
gtccataagcgtgtattgtatatagacattgatattcaccatggtgatggtgttgaggag
gcttttttcaccacagatagagtcatgacagtgtcttttcataagtttggggacttcttt
cctggtacggggcacatcaaagacattggtgcaaatcaagggaagtactatgccctaaat
gtcccattgaatgatggaatggacgacgaaagtttcggtagactatttcgtcccacaata
caaaaggtcatggaggtctaccaacctgatgctgttgttcttcaatgtggggctgattca
ctggctggagacaggctgggttgcttcaacttgtctgtcaagggtcatgcagattgcctt
agatacctcagatccttcaatgtccctctgatggtattgggtggtggaggttatactata
agaaatgtcgctaggtgctggtgctatgagacagcagttgcagttggagtagagcctgaa
aataaattgccctacaatgaatattatgagtattttggcccagattatactcttcatgtt
gaaccaaatcccatggagaatcaaaattcacctagggatctggaaaagatcaggaacata
ttgcttgagcaactttcacagttacctcatgctcctagtgtgccatttcaaaccactcct
tctacaacagaagttccagaggagaaagaggaaaatatggatcgaaggccaaaaccacgg
atatggaatggtgaaggttatgagtctgatgctgatgaagatgagaagcctaggcaacga
agttcagatagtaatcttactccagtagaatcatctgacatgagggatgttgacaaccaa
gccaatggagatgacatggttgatgatcattcctag
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integrated database retrieval system