KEGG   Capsicum annuum (peppers): 107851186
Entry
107851186         CDS       T04646                                 
Name
(RefSeq) histone deacetylase 6
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
cann  Capsicum annuum (peppers)
Pathway
cann03082  ATP-dependent chromatin remodeling
cann03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:cann00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    107851186
   03083 Polycomb repressive complex
    107851186
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cann03036]
    107851186
Enzymes [BR:cann01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     107851186
Chromosome and associated proteins [BR:cann03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     107851186
   HDAC complexes
    Sin3A-HDAC complex
     107851186
    BRAF-HDAC complex
     107851186
    REST complex
     107851186
    SHIP complex
     107851186
    MiDAC complex
     107851186
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     107851186
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    107851186
  Chromatin remodeling factors
   NuRD complex
    107851186
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 107851186
NCBI-ProteinID: XP_016551602
UniProt: A0A1U8EWM8
LinkDB
Position
6:complement(211911390..211915503)
AA seq 471 aa
MDSSTVDGGASLPSTGTDGKKRRVSYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYYL
HRRMEISRPFPAGDDDIRRFHSSDYVDFLSSVSPETLHDHTHARHLKRFNVGEDCPVFDG
LFGFCQASAGGSIGAAVKLNRQDADIAINWAGGLHHAKKSEASGFCYVNDIVLGILELLK
VHKRVLYIDIDIHHGDGVEEAFFTTDRVMTVSFHKFGDFFPGTGHIKDIGANQGKYYALN
VPLNDGMDDESFGRLFRPTIQKVMEVYQPDAVVLQCGADSLAGDRLGCFNLSVKGHADCL
RYLRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPENKLPYNEYYEYFGPDYTLHV
EPNPMENQNSPRDLEKIRNILLEQLSQLPHAPSVPFQTTPSTTEVPEEKEENMDRRPKPR
IWNGEGYESDADEDEKPRQRSSDSNLTPVESSDMRDVDNQANGDDMVDDHS
NT seq 1416 nt   +upstreamnt  +downstreamnt
atggactcctccaccgtagacggcggtgcatcgcttccctctaccggcaccgacggtaag
aaacgccgtgtctcttatttctacgagccaacaatcggcgactattactacggtcaaggt
catccgatgaagcctcaccgtattcgtatggcccataatctcatcgtccactattatctc
caccggcgtatggaaatcagccgtccttttcccgccggagacgatgatatccggaggttt
cactcgtcggactatgtcgattttctctcttccgtttcgcctgagacgttacatgaccat
acacatgcgcggcatctgaagaggtttaatgttggtgaagattgcccggtttttgatgga
ctttttgggttttgtcaagcgtcggctggtggatctattggtgcggcggttaagctgaat
aggcaggatgcggatatagcgattaattgggctggtggattgcaccatgcaaagaaaagt
gaagcttctggattctgttatgtgaatgatattgttttgggtattctcgagctgcttaaa
gtccataagcgtgtattgtatatagacattgatattcaccatggtgatggtgttgaggag
gcttttttcaccacagatagagtcatgacagtgtcttttcataagtttggggacttcttt
cctggtacggggcacatcaaagacattggtgcaaatcaagggaagtactatgccctaaat
gtcccattgaatgatggaatggacgacgaaagtttcggtagactatttcgtcccacaata
caaaaggtcatggaggtctaccaacctgatgctgttgttcttcaatgtggggctgattca
ctggctggagacaggctgggttgcttcaacttgtctgtcaagggtcatgcagattgcctt
agatacctcagatccttcaatgtccctctgatggtattgggtggtggaggttatactata
agaaatgtcgctaggtgctggtgctatgagacagcagttgcagttggagtagagcctgaa
aataaattgccctacaatgaatattatgagtattttggcccagattatactcttcatgtt
gaaccaaatcccatggagaatcaaaattcacctagggatctggaaaagatcaggaacata
ttgcttgagcaactttcacagttacctcatgctcctagtgtgccatttcaaaccactcct
tctacaacagaagttccagaggagaaagaggaaaatatggatcgaaggccaaaaccacgg
atatggaatggtgaaggttatgagtctgatgctgatgaagatgagaagcctaggcaacga
agttcagatagtaatcttactccagtagaatcatctgacatgagggatgttgacaaccaa
gccaatggagatgacatggttgatgatcattcctag

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