Capsicum annuum (peppers): 107859475
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Entry
107859475 CDS
T04646
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1
KO
K14485
transport inhibitor response 1
Organism
cann
Capsicum annuum (peppers)
Pathway
cann04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
107859475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cann04121
]
107859475
Ubiquitin system [BR:
cann04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
SCF complex
Target recognizing subunit (F-box)
107859475
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GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_4
F-box-like
F-box
Motif
Other DBs
NCBI-GeneID:
107859475
NCBI-ProteinID:
XP_016559991
UniProt:
A0A1U8FL76
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Position
2:131510046..131515557
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AA seq
583 aa
AA seq
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MNPTLKKPRESVDLSELTQSTFPDEVLEKVLSLVQSHKDRNSASLVCKDWYNAERWTRTK
LFIGNCYSVSPEIVARRFPKIKSVTLKGKPRFSDFNLVPENWGADIQAWLDVFAKVYPFL
EELRLKRMAVSDESLEFLAKSFHGFKVLSLLSCDGFSTDGISSIAAHCKSLTELDIQENG
MDDISGSWLSCFPDDFASLEVLNFASLNSEISIDALERLVSRCKSLRVLKVNKNVTLSQL
QRLLVRAPQLIELGTGCFLPDLTSRQYAELESAFSNCKNLHTISGLWEATYRYLPVLYAA
CASLTFLNLSYATIRSGEFLKLLAHCPSLRRLWVFDTVKDEGLEAVGTSCPLLEELRVFP
ADPFEEDIVHGVTESGFVAVSAGCPKLQYVLYFCRQMTNAAVATIVRNCPDFTHFRLCIM
NPGQPDYMTNEPMDEAFGAVVKTCKKLQRLSVSGLLTDLTFEYIGRYAKNLETLSVAFAG
RSDWGMQCVLEGCSKLRKLEIRDCPFGNAALLSGLEKYESMRCLWMSACSVTMNGCRLLA
QERPRLNVEVIKDENSDDSADKLYVYRSVAGPRRDAPPFVVTL
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgaatcccaccttgaaaaaaccgagggaatctgtagatttatccgagttaactcagtca
acattcccagatgaagtgttggagaaggtgttgtctcttgtgcagtcccataaagataga
aactcagcttcattggtctgcaaggattggtacaatgcagagagatggacaaggactaag
ctgtttattggcaactgttattcagtttctcctgagattgtagcaaggagatttcccaag
attaagagtgtgacccttaaagggaaaccaagattttctgactttaatttggttccagag
aattggggtgctgatattcaggcttggcttgatgtttttgctaaagtttacccttttctt
gaggagttgaggttgaagagaatggctgttagtgatgaaagtttggagtttttggcaaaa
tcatttcatggatttaaggttctttcattgttgagttgtgatggttttagcactgatggg
atcagtagcattgctgctcactgcaagagcttgacagagctggacattcaggaaaatggc
atggatgatatatctggtagttggctaagttgttttccagatgactttgcatcactggag
gtgctaaactttgccagtctaaacagtgagatcagtatcgatgctttagagagacttgtc
agtaggtgcaaatcactgagggttctgaaggtgaacaagaacgtcaccttgtctcaactg
caacgcctgctcgtccgggctcctcagctgatcgagctgggtacaggatgctttcttcca
gatctgacgagtcggcagtatgcagaacttgaaagtgcattcagcaactgcaaaaatctg
cacactatttcaggtttatgggaagcgacttatcgatatttaccggttctttatgcagcc
tgtgctagtctgactttcctcaacttgagctatgcaaccattaggagtggtgaatttttg
aagcttctcgctcattgcccaagtttaaggcgcctttgggtctttgacaccgtcaaagat
gagggattagaggctgttggaaccagctgccccttgcttgaagaactgcgagtctttcct
gctgacccttttgaagaggatatagtccatggagtgacggagtcgggttttgtggctgta
tctgccggttgtcctaagcttcaatatgttctctatttctgccgacaaatgactaatgct
gctgttgcaacgatagtgcgtaactgtcctgatttcacccattttcgtctctgcataatg
aatcctggccagccagattacatgacaaatgaacccatggatgaggcatttggtgcagtg
gtcaagacttgtaaaaagctccagaggctttctgtttctggactgttaactgacctgact
tttgagtatattggtaggtatgccaaaaaccttgagacactttcagtggcttttgctggc
cgcagtgactggggtatgcagtgcgtgcttgaaggctgttctaaactgaggaagctggag
ataagggattgtccatttggtaatgcagcacttctatctggactggagaagtatgaatca
atgcggtgtctttggatgtcagcttgcagtgtcaccatgaatggttgtagactacttgca
caggagagacctaggttgaatgttgaggtaatcaaagatgagaacagcgatgattctgct
gataaattatatgtctatcgctctgtagcagggcctcgaagggatgccccaccttttgtt
gtaactctctag
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