Capsicum annuum (peppers): 107877050
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Entry
107877050 CDS
T04646
Name
(RefSeq) YTH domain-containing protein ECT4 isoform X1
KO
K20102
YTH domain-containing family protein
Organism
cann
Capsicum annuum (peppers)
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cann03019
]
107877050
Messenger RNA biogenesis [BR:
cann03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
107877050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YTH
ANAPC_CDC26
Motif
Other DBs
NCBI-GeneID:
107877050
NCBI-ProteinID:
XP_016579318
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All DBs
Position
1:83894473..83899224
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AA seq
715 aa
AA seq
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MSTPCFSPPVQIIVIEVLFLHFTAIEAADLLQKLSLDSQNKTLEISEPKKKPSVDSKDVG
NGQIQSVDRSVTPVLPDFMDPTLCYVPNGYPSTAYYYGYDGSGNEWEDYSRYVNSDGVDM
TGAYGDNGSLMYHHGYGYAAYSPYSPATSPVPTVGHDGQLYGAQHYHYPYFQPVPPTSTP
YATSVAPPKGEISTSSVADQAPLSVDSATGKSNGIANGPTSVRPAFQSSSLNTNGSFGRG
AYPGGVASGYQDPRFGFDGVRSPIPWLDGSIFNDGQARIVTGNSVTPSFSNGSAVLSSKN
QNVHPHVVQGLHHPRPSSGMNTTNGYMNRMYPNKYYGQYGNTFSSGMGFGSNRYDSRTTG
RGWMAVDNRFKPRGRGSSFYGYGNENMDGLNELNRGPRGKGAKNQKGITPVALAVKGQNI
PLNVTNDAEKDKPSLILDREQYNCQDFPVTYTDAKFFIIKSYSEDDVHKSIKYNVWASTP
NGNKKLDAAYQEAQQKSGSCPVFLFFSVNTSGQFVGVAEMVGPVDFNKNVDYWQQDKWIG
CFPVKWHIVKDVPNSLLKHITLENNENKPVTNSRDTQEVKMDQGQQLLKIFKDHISKQCI
LDDFEFYEDRQKRIQEKKAKQQLFQKQPQVWEGKVSEEKNKENANSELNSQKPSEVSAVL
NKEGLLPLQPNGQVKLAENVSVTKLVDDVKGAKPVIGSDKKPVANGIANGVANAC
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgtctactccttgtttttctcctcctgttcaaatcattgttatagaagtgttgttcctt
cactttactgctatagaagctgcagatttgctgcagaagttgtcattggattctcagaat
aagacacttgaaatttcagagccaaaaaagaagccttccgtggactcaaaagacgttgga
aatggccagatccagtcagtggatcgatctgtgacccctgtgttgccggatttcatggat
ccaactttgtgctatgttcctaatggttatccctctacagcatactattatggatatgat
ggttctggtaatgaatgggaggactattcaagatatgtgaattcggatggagttgatatg
actggagcatatggggacaacgggtcacttatgtatcaccacggctatggttatgcagcc
tatagtccatactcgcctgctacttcccctgtccccactgtggggcatgatggccagctt
tatggagcacaacactaccactatccatatttccagcccgtccctccaaccagtactcca
tatgctacttcggttgctccaccaaaaggtgagatttccacctcttctgttgcggaccaa
gcaccattgtctgtggattctgctactggaaaatctaatggcattgcaaatgggcctaca
tctgtgaggcctgcattccagagctcatccttaaatactaatggttcttttggacgggga
gcctatcctggaggagttgcttctggttatcaggatcctagatttggttttgatggtgta
cgatcgcccattccatggctagatggatcaatattcaatgacgggcaagctaggatagtg
acgggtaattctgttacaccatcattttcgaatggcagtgctgttctatcatcaaaaaat
cagaatgttcatccgcatgtagtgcagggtttgcaccaccctaggccctcgtctggcatg
aatacaactaatggctatatgaataggatgtatcccaacaaatattatgggcagtatggg
aatacattcagttctggcatgggctttgggtccaaccggtatgattctcgtactacaggt
cgtgggtggatggctgttgataacagatttaaacccaggggtagaggaagtagtttctat
ggctacggcaatgagaacatggacggtctaaatgagctcaacaggggaccaagaggtaaa
ggagcgaagaatcagaagggtattacaccagttgctctggcagtcaaggggcagaatatt
ccgctcaatgtaaccaatgatgccgaaaaagataaaccaagcttgatattagacagagaa
caatacaactgtcaagattttccagtgacatatactgatgccaagttttttatcatcaag
tcttacagtgaagacgatgtgcacaaaagcatcaaatataatgtttgggctagcacacca
aatggtaacaagaagcttgatgctgcataccaggaggctcaacagaagtctggaagttgt
cctgtcttccttttcttctcggtaaacacaagcggacagtttgttggtgttgcagagatg
gtaggaccggttgatttcaacaagaatgtggattattggcagcaagacaagtggatcggc
tgttttcctgtcaaatggcacattgtgaaggatgttccaaacagcttattgaaacatatc
actctggaaaacaatgagaacaagcctgttaccaacagcagagacactcaggaggttaaa
atggatcagggccaacagctgcttaaaatatttaaggatcatattagcaaacagtgcatc
cttgatgattttgagttctatgaggatcgtcagaagagaatccaggaaaagaaggccaag
cagcagctattccagaagcagccgcaggtgtgggaaggcaaagtctctgaagagaagaac
aaagaaaatgctaacagcgaacttaattcccagaaaccttcagaagtttctgctgttttg
aacaaggaaggtttactgcctcttcaacctaatggacaggtcaagcttgcagaaaatgtt
tcagttacaaaattagtggatgatgtgaagggtgcaaagccagtcattgggtcggacaag
aaacctgtagctaatgggatagcaaatggggttgctaatgcatgctag
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