Capsicum annuum (peppers): 124891140
Help
Entry
124891140 CDS
T04646
Name
(RefSeq) ATP-dependent RNA helicase DBP2-like
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
cann
Capsicum annuum (peppers)
Pathway
cann03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124891140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cann03041
]
124891140
03009 Ribosome biogenesis [BR:
cann03009
]
124891140
Enzymes [BR:
cann01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
124891140
Spliceosome [BR:
cann03041
]
Complex A
U1 snRNP components
U1 related factors
124891140
Complex B
124891140
Ribosome biogenesis [BR:
cann03009
]
Eukaryotic type
Pre-60S particles
Helicases
124891140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
SNF2-rel_dom
Terminase_6N
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
124891140
NCBI-ProteinID:
XP_047258906
LinkDB
All DBs
Position
Unknown
AA seq
499 aa
AA seq
DB search
MSYVPPHLRNSAGRKTTTATINSNGADHFSSKHSSHQSRIPSIYGNGELEKQVFSISARR
SSINYTLPKTLAVPDPVFPKWKPSERVLRLKSEQIEEIRLRLNVDVNVAPGSRPAPSPIE
SFPDMCLHPSIMKDIEKHGYTAPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFSIPMIQ
HCLAQQPLQRGDGPLALVLAPTRELAQQIEKEVTAFSMSLDFFKTAIVVGGTNISEQRCE
LRAGVHIVVATPGRLIDHLQQGNTSLSRITFVVLDEADRMLDMGFEPQIREVMRNLPEKH
QTLLFSATMPAEIEALAQDYLFNPVRIKVGKVSSPTANVSQTLEKVPENDKIDRLLDLLV
EEAAQAEKSGHPFPLTIVFVERKTKCDEVAEALMQQGLLATALHGGRSQNEREAALREFR
HGPINILVATDVASRGLDVTGVAHVINLDLPKTMEDYVHRIGRTGRAGSTGRAASFYTDR
DMVFPHFSVGLFIYLDIHL
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgtcttatgtacctcctcacctgagaaattctgctggcagaaaaacaaccacagctact
attaatagtaacggcgccgatcacttctcttccaaacacagttcgcatcaatccagaatc
ccttctatttacggcaatggcgagctcgaaaaacaggtattctcgatttcagctcgccgg
agctccatcaattacacgttgccaaagactcttgctgtccctgaccccgtgtttcccaag
tggaagccttccgaacgtgttcttcgtcttaagtccgagcagatagaagagattcgactg
aggcttaacgttgatgtcaatgttgctccaggctcacgtcctgcaccttcacctattgaa
tcatttcctgatatgtgcttacatccaagcatcatgaaggatattgaaaagcatggctac
actgcaccgacttctattcaggctcaagccatgcctgttgctcttagtggcagggatctc
ttgggttgtgcggaaactggtagcgggaagaccgctgcatttagcatacctatgatacag
cactgcctggctcaacaacctcttcaacgtggtgatggacctttggcattagtgttggca
cctacaagagagcttgcacaacaaatagagaaagaggttacggctttcagcatgtctttg
gatttctttaagactgcaattgttgtaggtgggacaaacattagtgagcagaggtgtgag
cttcgagcaggagtacatatagttgttgctactccgggaagacttatagatcatttacaa
caaggaaatacttccctcagcaggatcacttttgttgttttggatgaggctgataggatg
cttgacatggggtttgaacctcagataagagaggtaatgcgaaatcttccggaaaagcat
cagacactgctcttcagtgccaccatgccagcagaaattgaggcattggcacaggattac
ttgtttaatcctgtgcgcataaaagttggaaaagtaagcagcccaactgcaaatgtttcc
cagactttagagaaggtacctgaaaatgacaagattgatcgacttttggatttgctggtt
gaggaggctgctcaagctgaaaagtctggccatcctttccctttgaccattgtatttgtg
gaacgaaaaacaaaatgtgatgaagtagcagaagctttaatgcagcagggtttgcttgca
actgcacttcatggtggtcgtagccaaaatgaaagagaggctgcccttcgtgaattcaga
catggacctatcaatatcttggttgctactgatgttgcgtctaggggattggatgtcaca
ggagttgcacatgtaattaacctagatctcccaaagactatggaagactatgtacaccgg
attggaaggactggtcgggcaggatcaacaggccgagctgcttcattttacactgatcgt
gatatggtcttccctcacttctctgttggcttgttcatataccttgatattcatttgtga
DBGET
integrated database retrieval system
