Crassostrea angulata (Portugese oyster): 128162713
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Entry
128162713 CDS
T09348
Name
(RefSeq) pre-mRNA-processing factor 40 homolog B-like
KO
K12821
pre-mRNA-processing factor 40
Organism
canu
Crassostrea angulata (Portugese oyster)
Pathway
canu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
canu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128162713
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
canu03041
]
128162713
Spliceosome [BR:
canu03041
]
Complex A
U1 snRNP components
U1 related factors
128162713
Complex B
128162713
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FF
WW
Glyco_hyd_101C
LUD_dom
Motif
Other DBs
NCBI-GeneID:
128162713
NCBI-ProteinID:
XP_052681957
EnsemblRapid:
LOC128162713
LinkDB
All DBs
Position
9:6790870..6804429
Genome browser
AA seq
850 aa
AA seq
DB search
MAQNNGPPGPPNPMMRPPPYGMPPGANFMPPPMGAPDMPAPPMMGGPPGFQPPAGNIPPP
HYPPPGGMPPMGMPPAFPTPGGSNPQVQSVSQSNSASNSPLGDKQDKKVWTEHKAPDGRT
YYYNHISKQSSWEKPDDLKSKAELMLSNCPWKEYKSDSGKIYFHNSQTKESRWTKPKELE
ELEEMVAKKTQEGALSSTDPGPVIAAPPTTVAPPPAGSITLPQQPAKPSSAIQAAMQATL
ASIKLPPPTPTAKMEKEMKEISDEEEEKPKKEVVPLVFKNKKEAMDAFKSLLKEKGVSST
ASWEQALKLIVNDPRYGALKQLNERKQAFNEYKTKRAKEEKEEQRLRAKQAKEDLEHFLL
HADKMNSSVKYWKADDLFGDQDVWRRVDDRDRREIFDDVVHMLAKKEKEESKSLRKRNTK
VFTEILDSMPSLTHCTTWSEASQMLLDNPRFTEDPDLHNMDKEDALICFEEHIRLLEQEN
DDEKERERRRVKRQQRKNREGFLVLLDELHEQAKLNSMSLWMDLYRIISQDVRFTNMLGQ
PGSTPLDLFKFYVEDLKARFHDEKKIVKEILKEKGFMVEVSTVFEDFASQIASDRRASGL
DTGNIKLTFNSLIEKAEAREKERLKEEARKLRKLESQFRTALKQINPPIEPDSKWDDVKE
KLEKDPVFEVITLESERIRLFKEYQAVLEDACSHHHAKRKKRKQKHKRSRSRSGSESDNE
TASVRSSSKHKSKKKKKTRSESRSRSPSNIPDSDHEDREREKKKRSHPESDQEEREKKKH
KKKSKKKKHVSHSASSASEDEEKQKSSSQSKPKKRKKNKGGDNGSSDSDLSEGELERRRN
QLLQQLEADQ
NT seq
2553 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaaaacaacggacctccgggaccgccaaatcctatgatgaggcctccaccttac
gggatgcctcccggagcgaacttcatgcccccacccatgggagctccagacatgccagct
cctcctatgatgggagggccccctggtttccagcctccagcaggaaatattccaccccct
cactaccctccccctgggggtatgccacctatggggatgcctccagcctttcccacccca
ggaggcagtaacccacaggtccagtctgtttctcagtccaactctgcctcaaattcaccg
ctaggagacaaacaggataagaaggtatggacggaacacaaggcccctgatggtcgcacg
tactactacaatcacatcagcaagcagtccagctgggaaaaaccagacgacctgaaatcc
aaggcagagctgatgctgtctaactgcccttggaaggagtacaagtcagactcgggcaag
atctacttccacaactcacagaccaaggaatcccgctggaccaagcccaaggaactggaa
gagttagaggaaatggtggccaagaagacacaagaaggtgcattaagcagcacagatccc
ggtccagtgattgcagcaccccctaccacagtagcaccgccccctgcaggcagcatcacg
ttaccgcagcaaccagccaaaccatcgtccgccattcaggctgccatgcaggcaacactg
gcctcaatcaagttaccaccccccactcctacagccaagatggagaaagagatgaaagaa
atcagtgatgaagaagaagaaaagccgaaaaaagaggttgtcccacttgtgttcaaaaat
aaaaaagaggcgatggacgccttcaaaagtctgctgaaggagaagggtgtgtcctccaca
gcgagctgggagcaagcgcttaagctgatagtgaacgaccctcgatacggggcgctcaaa
cagctcaatgagcggaagcaagcttttaatgagtacaaaactaaaagagccaaggaggaa
aaggaggaacaaagattaagagcaaaacaagcaaaagaagacttggagcatttcttgttg
catgcagacaaaatgaattcaagtgtcaagtattggaaagctgacgacctgtttggagac
caggatgtgtggcgacgagttgacgatcgggatcggcgggaaatctttgacgacgttgtg
cacatgctggccaagaaagaaaaagaggaatcaaaatctttgagaaagaggaacaccaag
gtgtttacggagattctggacagcatgccgagtctgacccactgtactacatggtcggag
gcctcacagatgctgctggacaaccctaggtttacggaggaccccgatctacacaatatg
gacaaagaggacgcactcatatgtttcgaggaacacattcgactgttggagcaagaaaac
gatgatgagaaagagagagagcgacggagagtgaaacgacagcagaggaaaaacagggag
ggattcctggttctactagatgagcttcatgagcaggcaaagctgaactccatgtcgctg
tggatggacctctacagaatcatcagtcaggatgtccgcttcaccaacatgttgggacag
ccaggatccacacccctggacctctttaagttttatgttgaggatctgaaggctaggttt
catgatgaaaaaaaaattgtgaaagaaattctgaaggagaagggatttatggtagaagta
agcacagtgtttgaggacttcgcctcacagattgcttcagacagaagggcctccggtctg
gatacagggaacattaaactcacctttaacagtcttatagaaaaagcagaagcaagggag
aaagagagattgaaagaggaggctaggaagctgcgcaagttggagagtcagtttagaaca
gccttaaagcaaatcaaccccccgattgagcctgactctaagtgggatgatgtgaaagaa
aagctagagaaggacccagtgtttgaggtgatcactctggagtcggagaggatccgactg
ttcaaggagtaccaggctgtgttagaagatgcctgcagtcatcaccacgccaagcggaag
aagaggaagcagaaacacaagaggtccagatcacgatctgggagtgaatcagacaatgaa
acagcttcagtcagatcctcttccaaacacaagtcaaagaagaagaagaaaactcgctct
gaatctcgctcacggtctcctagcaacataccagactcagatcatgaggatcgtgagcga
gagaagaaaaagcgcagccatccagagtcagaccaggaggagagagagaagaagaaacac
aagaagaaatccaagaaaaagaagcatgtttctcatagcgcatctagtgccagtgaagat
gaagagaagcagaaaagttccagccaaagtaaacctaaaaaacgcaagaaaaacaagggt
ggagataatggctcctcagacagtgacctcagtgagggagagttagagaggagaaggaac
caacttctacaacagctcgaggcagatcagtaa
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