Crassostrea angulata (Portugese oyster): 128163110
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Entry
128163110 CDS
T09348
Name
(RefSeq) integrin beta-3-like
KO
K06588
integrin beta 5
Organism
canu
Crassostrea angulata (Portugese oyster)
Pathway
canu04145
Phagosome
canu04148
Efferocytosis
canu04512
ECM-receptor interaction
canu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
canu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
128163110
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
128163110
04148 Efferocytosis
128163110
09142 Cell motility
04820 Cytoskeleton in muscle cells
128163110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
canu04131
]
128163110
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
canu04515
]
128163110
Membrane trafficking [BR:
canu04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
128163110
Cell adhesion molecules [BR:
canu04515
]
Integrins
Integrin beta subunits
128163110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
I-EGF_1
EGF_2
Motif
Other DBs
NCBI-GeneID:
128163110
NCBI-ProteinID:
XP_052682576
EnsemblRapid:
LOC128163110
LinkDB
All DBs
Position
9:complement(3635650..3665459)
Genome browser
AA seq
797 aa
AA seq
DB search
MDVSIWRCLLLLGFAIYCVQCKCPSASKRCGDCLITKDCAWCKDRNFTETRCNTVANLTT
NNCANIVRRKQHSIQYIKNSNFSDGGPGQDSVQIKPQHVSIKLVPNVVLTDFQVSYKIAR
NFPLDLYFLNDPSFTMLPLQASLKSLAKSIANEIQNLTTDFQFGLGTAMDKVILPFTRTS
PKYLNDPCFGTIVTCEKAYSYRHRLKLTPRIEDFEAAVDDIRTTANFDKPEGLFDGLLQT
MVCGTKIGWREKARRMLLYASDINFHQAGDGRLAGILEPNDGTCHLNGDGYYTKAEVQDY
PSIGQIIQKAKENNINIIFVIGGNSSELNNQQVRNLFYDKLATLLPGGTPRASELSTDAR
NILDIVSANYRRLRETVKLVVNEDSEEIQVVMYTNCQTGGRLKDQTNVCSGLTTEKSATF
YPYIMSTFNTCPEKRNVTFTIFPEGLEERVQVDIEHVCDCDCQLQPEAEPDSEKCSYNGT
YECGICNCNPGWIGDQCECDDRGTAEEACGTSNGICNNAGNCTCRKCECFEGYSGDKCEC
NDKNCRSYERMLCGGPDRGRCDCGKCVCNANYTGEACECAVSTADCQKDNGTICSGNGEC
VCNRCQCKTGFRGKICDQCTSCPGTCKNNKDCAECVAFGTGLYNSTVCEKMCTNVKTAPL
LEPATPEGQVVNITIKSCITEDDQKCIINFNVYDSDSGKEVIVKDTRRCPPGSPDPIKIG
LSISGAIFLIGLLLLLIWKLLTMLYDSMEYSRFESEIQNPAWERSENPIYKECVTTVQNP
MHETQFKNDSSDEKLMQ
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atggatgtatcgatatggcgatgtttactacttttaggttttgcgatttattgtgtacag
tgcaagtgtccaagtgcgagcaagagatgtggggactgcttgatcaccaaggactgtgcc
tggtgcaaggatcggaatttcacggagacccggtgtaacactgtggctaatctaacgacc
aataactgtgccaacattgtcaggagaaagcaacatagtatacaatatattaagaacagt
aatttttctgatggcggaccagggcaagactctgtacaaatcaaaccacaacatgtctca
atcaagcttgttccaaacgtggtgcttacggatttccaggtttcctataaaattgccagg
aatttccccttggatttgtactttttgaatgacccttctttcacaatgttacctctgcag
gcttctttgaaatcgctggccaaatctattgccaatgaaatacagaatttgacgactgat
tttcagtttggtctgggaactgccatggataaggttattctcccattcactcgaacatct
ccaaaatatttaaacgatccatgcttcggaaccatagtcacgtgcgaaaaagcctactcc
tatcgccatcgtttgaaactgacgccaaggatagaagattttgaggcggctgtcgatgac
ataaggactacggctaatttcgataaacctgaggggttatttgacggtctgttacagact
atggtgtgcgggaccaagattggatggagggaaaaagccagacgtatgttgctgtacgcc
tccgatattaacttccaccaagctggagacggcaggctggcaggaattctagaaccaaat
gacggaacatgtcaccttaatggtgatgggtattataccaaggctgaggtccaggactac
ccttcgattggtcaaataattcaaaaggccaaagaaaacaacattaacattatttttgta
attggtggaaattcctcggagttgaacaatcaacaggtccggaatctgttttatgacaag
ttggctacgttactgcctggggggacacctcgagcttcagaactgtcaacagacgcacgc
aacatcttggatatcgtcagcgcaaactataggcgtctaagagagactgttaaattagtt
gtgaatgaagacagcgaggaaatacaggtggtaatgtacacaaactgccagaccggtggt
cgacttaaagaccagactaatgtatgttcaggactaaccacggaaaaatcggctactttt
tacccttacattatgtctacctttaacacttgtccggagaaaagaaatgtgacgttcacc
attttccccgaaggcctggaggaacgtgttcaggtggacatagaacacgtgtgtgactgt
gactgccagctccaaccagaggctgaaccagacagtgagaaatgtagttataacgggact
tacgagtgcggtatctgtaactgtaatcctggttggataggtgaccagtgcgagtgtgac
gacaggggcacagccgaggaggcctgtggcacgtccaatggcatttgcaacaacgcaggg
aactgcacctgccgaaagtgtgaatgttttgaaggatacagtggtgacaagtgtgaatgt
aatgataaaaattgcaggagctacgaacggatgctttgtggaggaccagatcgtggtcgg
tgtgactgcggtaagtgtgtgtgtaacgccaactacacgggagaggcctgtgaatgtgct
gtgtccacagctgactgtcaaaaggacaacgggacgatctgctctggtaatggggaatgt
gtgtgtaatcgatgccagtgtaaaactggtttccggggaaaaatttgtgaccaatgcaca
agttgtccaggcacctgtaaaaataacaaggactgtgccgagtgtgtagcatttggtact
ggactgtataattccaccgtctgtgagaagatgtgcaccaatgtcaaaactgccccttta
ttggaacctgcaacccccgagggacaagttgtcaatataactatcaagtcctgcatcaca
gaagacgaccagaagtgcatcatcaattttaatgtttatgatagtgacagtggcaaggag
gtgatcgttaaggacacaagacggtgtcctcctggttcaccggatccgataaaaatagga
ctaagtatttccggagcgattttcctgataggactcttgttgttattgatctggaaattg
ctgactatgttgtacgatagcatggagtattccagattcgagtccgaaatccaaaatcct
gcatgggagagatcggagaatcccatttacaaggaatgtgttacaaccgtgcaaaatcca
atgcacgaaacgcaattcaaaaacgatagttcagatgaaaaactgatgcaatga
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integrated database retrieval system