Crassostrea angulata (Portugese oyster): 128164101
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Entry
128164101 CDS
T09348
Name
(RefSeq) bifunctional 3'-5' exonuclease/ATP-dependent helicase WRN-like isoform X1
KO
K10900
werner syndrome ATP-dependent helicase [EC:
5.6.2.4
]
Organism
canu
Crassostrea angulata (Portugese oyster)
Brite
KEGG Orthology (KO) [BR:
canu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
canu03032
]
128164101
03400 DNA repair and recombination proteins [BR:
canu03400
]
128164101
Enzymes [BR:
canu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
128164101
DNA replication proteins [BR:
canu03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
128164101
DNA repair and recombination proteins [BR:
canu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
128164101
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
HTH_40
RQC
HRDC
RecQ_Zn_bind
ResIII
Sigma70_r4_2
Motif
Other DBs
NCBI-GeneID:
128164101
NCBI-ProteinID:
XP_052683796
EnsemblRapid:
LOC128164101
LinkDB
All DBs
Position
9:35876014..35893157
Genome browser
AA seq
1153 aa
AA seq
DB search
METDALIKKLQGLRKCVTGIISQLVSGDEIDNSTGSQQVCQYLDEAGKLLTNVDKILRGE
EIGGDTVLEEGIKNGPCCSCGKINGSGRRKEDSTVISGGIDSKKENDGAGFQSDRLSAGN
DCQNRPNSFSTRDDVKWSGIKLDDGNGRNISNSKQESQLVTDCDSDATDDDDTPLLHSTH
NSDQSHDSQGVLQVMESPDGGQDEDGFGSDDDFNDSILQEIDEAERSFNSNKNVEEDDGD
EDPQNHPSDPKYLEVLKKYFGYSKFRPMQWKIINSVLNEKRDSCVVMATGYGKSLCYQFP
SVFTQKTTVVISPLISLMQDQVMGLQAANIEACFLGSAQENSTQVRQDLKRGKYRVLYIT
PEYASSGGVNHLKDLDRDVGLDLIAIDEAHCVSQWGHDFRSAYRSLGQLKEAFPQVPVLA
LTATATQEVRLDICRSLKLRDPSIICTGFDRPNLFLSVGLKTDTAFDLRSQMTKQGNKFN
FDGPTIIYCPTKKATNEVAAIVKGMNIPSAPYHAGLSQADRNKAHRQFVNDQVQVIIATV
AFGMGIDKPDVRKVIHYGAPKDIESYYQEVGRAGRDGLPSQCHVFYTEKDFLTSRHFISE
VQNEKFREHKMKMLGKMQQYLKTTTCRRRLLLSHFENKKLDDIGGTTNCCDNCRKNLERS
RQQSYYDAKNWSSVLPPGADICDGEQDFTKEARNLFDAIQALGCRFGLATVVLFLVGSHS
QRTSRFTKLSGFGNGKYRKTNWWKSFGKALIYEGYLKEVAIPNSFGSTVELSSKGSVWRR
GASPLKLTPTTDMLAEMRPPVAVTVRYMPAPSVSLSWSTSVPPSASASDWNSTKEEVRKT
VSPQKPVVDEKTMRARADLYAMLVKKRNDLAQETGYTPHSIASNKVLLDLAKIRPSSKES
LLKLEDFPQAKVEKFGPTFIKILKDYCQEKDVKMDDFPEIKLTKNDTDLMRELLRLTETQ
RASYVLFNRDNKSVEEVASLRGLKTTTVVSHLCEAIKVGLEVDPVRVGVTSQIESLITRV
IRGPEINSVISKLTPIKDRLPDYIEYNQIRVVIAGLVQKYGQVMSPTGDLVLDAPSSQDL
TDNTNSEIDGASVKVGGASGVCDSGASATQSSQSMSQADTTETTGQKRKLPGWMDGKTKP
VMSKKMRSNSLFR
NT seq
3462 nt
NT seq
+upstream
nt +downstream
nt
atggagactgatgcgttgataaagaagttacaaggacttaggaaatgtgtgacgggcatt
ataagtcagctggtatccggggacgaaattgacaacagtacaggctctcagcaagtgtgt
cagtatttagatgaggcaggaaaactcctgaccaatgtcgacaaaattctccggggagaa
gaaattggtggtgacactgttttggaggaaggaataaaaaatggcccttgttgctcttgt
ggtaaaatcaatggcagtggaagaaggaaggaagattcgactgtgataagtggaggaatt
gattctaaaaaggagaatgatggtgcaggatttcaatctgacagactcagtgctggcaat
gactgtcagaatagaccaaattcatttagtacgagagatgatgtgaagtggagtgggatt
aaacttgatgatggaaacggcaggaatatttccaattcaaaacaggaaagccaattagta
acagattgcgactctgatgctaccgacgatgatgataccccacttctccattctacccac
aattcagatcaatcccatgattcacagggtgtcctacaagtgatggaatctccagatggt
ggtcaggatgaagatggctttggatctgatgatgatttcaatgacagcattctccaggag
attgatgaagcagagcggagctttaacagcaacaagaatgtagaagaggacgatggagat
gaggatccacagaatcatcccagtgatcccaaatacctggaagtgctgaagaagtacttt
ggatactcaaagtttaggccgatgcagtggaaaatcatcaactcggtcttgaatgaaaaa
agggacagctgtgttgtcatggcaacagggtatggtaaaagtttgtgttaccagttcccg
tctgtgtttacacagaaaacaacagtggttatctcccccttgatttccctgatgcaggat
caagttatgggactccaagctgccaatattgaagcctgctttttaggatcagctcaagaa
aattctacgcaagtgcgtcaagatctcaaaaggggtaaatatagagtgctgtacatcacc
ccggagtatgcctctagtggaggagtgaaccatctgaaagaccttgaccgagatgttggc
cttgacctgattgctatagacgaggctcactgtgtgtcacaatggggtcacgactttagg
tctgcctacaggtcattaggtcaactgaaagaagcattcccacaggtccctgtcctagca
ctgactgccacagctacgcaagaagttagattggacatctgcagaagtctcaaactacgg
gaccccagcatcatctgcacaggttttgacagacctaacctattcctctctgtgggtttg
aagacagacacagcctttgacctgcgctctcagatgacgaagcaggggaacaagtttaac
tttgatggtccgactattatctactgtcccaccaaaaaagccaccaacgaagtggctgca
attgttaaaggtatgaatattcctagtgccccataccacgccggactgtcccaggcggac
aggaataaggcacacagacagtttgtcaacgaccaagtacaggtcattatagcgactgtg
gcttttggtatgggcattgacaagccggatgtcagaaaggtgatacattatggagcaccc
aaggacatagagtcttactaccaggaagtggggagggcaggcagggacggactaccgagt
cagtgtcacgtcttctacacggagaaagacttcctgacttccaggcattttatcagtgag
gtacagaatgaaaaattcagagaacacaaaatgaagatgttggggaaaatgcagcaatat
ttaaagaccacaacatgccggcgaaggttgttgctatctcactttgagaacaagaagttg
gatgacatcgggggaaccactaactgttgtgataattgtcgtaaaaacctggagaggagt
cgacagcagagttactacgacgccaagaactggtcctcagtgctgccccctggtgctgat
atctgtgacggagagcaggatttcacgaaggaagcgcgaaatttgtttgatgccatacag
gctttgggctgtaggtttggacttgccactgtagttctgttccttgttggatctcactca
caaagaaccagcaggttcactaaactttcaggatttggcaatgggaagtacagaaaaaca
aattggtggaaaagttttggcaaagctctgatctacgagggatatctgaaagaggtggcg
atcccaaacagttttggctccactgtggaactgtccagtaaagggtcggtgtggaggagg
ggagcctcacccctgaagctgacccccactacggacatgcttgccgagatgaggccccca
gtggctgtgacagtcaggtacatgcctgcaccttctgtttctctgagttggagtacaagt
gtaccaccctccgcgtcggcgtctgattggaacagtaccaaggaggaagtcaggaagacg
gtgtcgccacagaaaccggtggtggatgagaagacaatgagagctcgggctgatttgtac
gccatgctggtgaagaagaggaatgacttggcccaggagacagggtacacacctcactcc
atcgccagcaataaggtgctactggacctagccaagatcagacccagtagcaaggagtca
ttgctgaaattggaggatttcccgcaggccaaagtggagaagtttggtccaacgttcatc
aagatccttaaagattactgccaagagaaggacgtcaagatggacgacttcccagaaatc
aaactgacaaagaatgacacggacctaatgagggaattgctccggttaacggaaacacag
agagcctcctacgtgttgttcaacagagacaacaaatctgtggaagaagtggcttcattg
cggggtcttaaaactacaaccgtcgtcagccatctttgtgaagccatcaaggtggggctg
gaggtggatccagtcagggtgggggtgacctcccagatagagagcctcattaccagggtc
atccgggggccagaaatcaactcagtgatcagcaaactgaccccaataaaggacagactg
ccagactacattgagtacaaccagataagggtggtcattgccggactcgtccagaagtat
ggtcaggtcatgtcacccacaggagatctggtgctggacgccccctcctctcaggacttg
acagacaatacaaactcggagattgatggcgccagtgttaaagttggcggtgctagtggt
gtctgtgacagtggtgctagtgcgacacagtcctctcagagtatgtcccaggcggacacc
acagaaaccacggggcagaagagaaagctaccgggatggatggacggaaaaaccaagcct
gtcatgtccaagaaaatgaggtccaacagcctgtttcgttag
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