Crassostrea angulata (Portugese oyster): 128164125
Help
Entry
128164125 CDS
T09348
Name
(RefSeq) chondroitin sulfate synthase 2-like
KO
K00747
chondroitin polymerizing factor [EC:
2.4.1.175
2.4.1.226
]
Organism
canu
Crassostrea angulata (Portugese oyster)
Pathway
canu00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
canu01100
Metabolic pathways
Module
canu_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
canu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
128164125
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
canu01003
]
128164125
Enzymes [BR:
canu01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
128164125
2.4.1.226 N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase
128164125
Glycosyltransferases [BR:
canu01003
]
Glycan extension
O-Glycan
128164125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CHGN
Fringe
Motif
Other DBs
NCBI-GeneID:
128164125
NCBI-ProteinID:
XP_052683831
EnsemblRapid:
LOC128164125
LinkDB
All DBs
Position
9:32187497..32193400
Genome browser
AA seq
776 aa
AA seq
DB search
MIHYHGIRSLLPVFIGIVLGFTLNVMVSPFLDETCDPSTIGQEQLVKLRETKSLYENEKT
SESEQPTVKVKNYEIPRPLKIESNPNKKPVRSRFVATELGIREKLFVAVLTSQDTVNSFA
LAVNKTTAHYVTKQMYFSTSKSGNVPAGMPLVSFSDKNSKHLPLHVLKYISEHFSHTYDY
YMFITDRTYIRAEKIIELVSHISISEDIHMGAVNIHAENNPDMCSLEGGVIISQSVLQKV
LAGLDWCLTNSPEANPSEIFGQCLYHSTKLPCSKHGGDKEYRHYKVEDFDYDDDISTLRE
DGRFNSSFSVYPMPDDLSLFKVHRYFCQLEVNLTRQEINKAKESIINLSYYTVDGIDSLS
WPIGTPEATRPKKRFDVIRWNYFTESHIFFEDDFTNMSPLNGVDKQDVQEVLQTAFKRAN
RLYDNKFSKFQLINGYRRFEPSRGMEYQLDLKLREKDTNIDVLKRFHLLRPLNKPELVPM
PYVTETSQVFLILPLFEKDVADGLHFLGEFQRNAIQIKDNSVLCLYLIYKKEKFSSDPFV
NVKSTVASITSQPNSNNKIMMKSVEMNLFSIKEMEFYDVIVSDFSASTLVSMVTPGMELE
LDYINRIRMNTIAGVQIYFPISYWQYKPNLAYDQKPYPDMVELTQKYGHFEPLSFFHCSF
YVSDFQKARRSLTANEVKHFSLIDMFLKYQKLHIFRAAEPALKNRWQNITCNEETNLQGE
HCLERRNQNLATRAQLAKLLFEYNEEDEEVDDEDDDDEAEEANFDKPFMMNALHKG
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atgatacattaccatggcattcgttcattattgccagtttttattggaatagttcttgga
tttacactcaatgtgatggtttccccatttttagatgaaacgtgtgatccgtcaacaata
ggccaagaacaacttgttaaattgagggaaacaaagtcactctatgaaaacgagaaaaca
agcgaaagtgaacaaccaactgtcaaagtgaaaaattatgaaataccccgaccgctgaag
attgagtcgaatccaaacaagaaacctgttcggtcaagatttgtggctacagaacttgga
atcagagagaaactctttgtagcagtgttaacaagtcaggacactgtcaattcatttgcc
cttgccgtcaacaaaaccacagcccattatgtgacaaaacaaatgtacttcagcacgtca
aaatcaggaaatgttccagctggaatgccccttgttagcttttccgataaaaacagcaaa
catttacctcttcacgtgctgaagtacatatcggaacatttttctcacacttatgactat
tacatgtttattactgacaggacatacattcgagctgagaagattattgaacttgtcagc
catatcagcatcagtgaggatattcatatgggcgccgtcaatattcatgctgaaaataat
cctgacatgtgttctctagaaggaggtgttattatatcacagtcagttctccagaaagta
ctggctggtttagattggtgcctgacaaattcacccgaggcaaaccccagcgagatcttc
ggtcagtgcctgtatcactcgactaagctgccttgttcaaagcatggaggggacaaggag
taccgtcactacaaggtggaagactttgattatgacgacgacatttcaacactccgagaa
gacgggcgatttaattcctcgttctccgtttatcccatgcccgacgatctgtcattattc
aaagtccacaggtacttctgccagctggaggttaatttgaccagacaggagataaacaaa
gccaaggagagcattattaacctgagttactacaccgtggacggaatcgactccttgtct
tggccaatcggtacacctgaggccaccagaccaaaaaagagatttgatgtcataagatgg
aactacttcactgagtctcatatcttctttgaggatgactttaccaatatgagtcctctg
aatggagttgacaagcaagatgtccaagaggtcctgcagacagcctttaaaagagctaat
agactttatgacaacaaattcagcaaatttcagttgatcaatggataccggcggttcgaa
ccttcgcgtggtatggagtaccagcttgatttgaagttgcgagagaaggacacaaatatt
gacgtattgaaaagatttcaccttctacgacccctcaacaaacctgaactggttcccatg
ccctacgttacagaaacgtctcaggttttcctgattctcccactttttgaaaaagacgtg
gcagacggattgcatttcctcggagaattccagagaaatgccatccaaattaaagacaat
tccgtcttgtgcctttacttgatttacaagaaggaaaaattctcctcggatccctttgtg
aatgtgaagtcgacagtcgcctcgataacgtcccagccaaattcgaacaataagatcatg
atgaaaagtgtggagatgaatttgttttccatcaaagaaatggaattctatgatgtgatt
gtttctgactttagtgccagcactttggtatccatggtaactccaggtatggaactggag
ctggattacattaaccggatacgcatgaatacgatcgcaggcgtacagatttatttcccg
atctcttactggcagtacaaaccgaatttagcatatgaccaaaaaccttacccagacatg
gtcgagttgacccaaaaatatggccattttgaacctctatctttctttcactgctcgttt
tacgtgtcggatttccagaaagctaggcgatctttgaccgccaatgaagttaaacacttc
tctctgatcgacatgtttctcaagtaccagaagctgcatatattcagagcagcagaacca
gcgctgaagaatcgctggcaaaatataacgtgtaatgaggaaacgaacctgcaaggtgaa
cactgcttggaaagacgcaaccagaatctggccactagggctcagctggcgaagcttttg
tttgagtataatgaggaggatgaagaagttgatgatgaagatgatgatgatgaggcagaa
gaagccaattttgataagccattcatgatgaatgctttacataagggttag
DBGET
integrated database retrieval system
