Crassostrea angulata (Portugese oyster): 128166849 Help Entry 128166849         CDS       T09348                                  Name (RefSeq) DNA ligase 1-like   KO K10747   DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] Organism canu  Crassostrea angulata (Portugese oyster) Pathway canu03030   DNA replication canu03410   Base excision repair canu03420   Nucleotide excision repair canu03430   Mismatch repair Brite KEGG Orthology (KO) [BR:canu00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     128166849    03410 Base excision repair     128166849    03420 Nucleotide excision repair     128166849    03430 Mismatch repair     128166849  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:canu03032]     128166849    03400 DNA repair and recombination proteins [BR:canu03400]     128166849 Enzymes [BR:canu01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      128166849     6.5.1.6  DNA ligase (ATP or NAD+)      128166849     6.5.1.7  DNA ligase (ATP, ADP or GTP)      128166849 DNA replication proteins [BR:canu03032]  Eukaryotic type   DNA Replication Elongation Factors    Other elongation factors     128166849  Prokaryotic type    Elongation factors (archaeal)     Other elongation factors      128166849 DNA repair and recombination proteins [BR:canu03400]  Eukaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     Long Patch-BER factors      128166849    NER (nucleotide excision repair)     Other NER factors      128166849    MMR (mismatch excision repair)     Other MMR factors      128166849 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C Motif Other DBs NCBI-GeneID:  128166849 NCBI-ProteinID:  XP_052688234 EnsemblRapid:  LOC128166849 LinkDB All DBs Position 10:4726185..4749931 Genome browser AA seq 937 aa AA seqDB search MQKSIKSFFSSPKPKKDETPTSKNAIEDEVKDERSPLKQNNGSPTKDSPVKATRKGRRCW VIESDDEEEGTKETEQENQSNSTDPVKVNGVEDKKTKSDEVEMVESPAKSPFGLPIRKTA RKSMTTPNNKKKSLSFSPQSESPAKKIKLEKEEEPVSNEKSNKNTEADEVKVEVKRETVE EDMEMEEAKETKTTPKSTKKSAKNQKKKKEEKSPSTKQNDASEEKKSSKTTKDTAEKKPQ KTFHSFFAPKTEPKVEDSSSEDKKSSDDKSVKKACLSEKREHGGYDPAKSNYHPIEDAVW TRNEKVPYLALAKTFEAIENISGRLKTIEILCNFFRSVIALSSSDLVQCVYLCLNKLAPA YEGLELGIGETVLMKAIAQATGRGIDKIKADAQEKGDLGLVAETSRSSQRTMFAPPKLTV PAVFNKLKEIAGMSGNAAMTKKIEKIKGMFVACRQCEARYLIRSLGGKLRIGLAEQSVLT ALGNAVFRTPPGQEFPPEVLDAGKGMGADTLKKKMEECTLVIKTTYCECPNYDAIIPALI KYGIEELPNHCKLTPGVPLKPMLAHPTKGVSEVFKRFDEADFTCEYKYDGERAQIHILEN GEVHIYSRNSENNTSKYPDIIARIPKVRNDSVTSCVIDSEAVAWDAEKKQIQPFQVLSHR KRKDADASEIKIQVCVYAFDLLFLNGKSLVKEPFRKRRELLHSSFKEVEGEFVFAKSMIS SNTDEIAEFLDESVKGNCEGLMVKTLDVDATYEIAKRSHNWLKLKKDYLDGVGDTLDLVV MGGFLGTGKRTGKYGGFLLGCYDEENEEFQSICKIGTGFTDADLEKHATFFKDHVTEKPK PYYRYDSSVEPDHWFDAVQVWEVKCADLSISPTHLAAAGIVDPEKGISLRFPRFLRIRDD KKAEDATSASQVAELYKSQQQIQNQQKSEKEEVEDFY NT seq 2814 nt NT seq  +upstreamnt  +downstreamnt atgcaaaagtccataaaatcatttttctcatctccaaagcccaagaaagatgaaacacct actagcaaaaatgctattgaagatgaagttaaggacgagcgatctcccctgaaacaaaat aatggatccccgacaaaggactcgcctgtaaaggcgacaagaaagggaaggagatgttgg gttattgagagtgatgacgaggaggagggaactaaggaaacagaacaggagaaccagtca aacagtactgacccggtcaaggttaatggtgttgaagacaagaagacaaagagtgatgaa gttgagatggttgaatcaccggcaaagtctccatttggacttccaatcagaaaaacagcc cggaaaagtatgacaacccccaataataagaagaagagtctgtcctttagtcctcagagt gaatcgccggccaagaaaatcaagctggagaaggaggaagagccagtctccaatgaaaag tcaaataaaaatacagaggctgatgaggtgaaagttgaggtcaagagggaaactgtggag gaagacatggagatggaggaggcaaaggaaactaaaacaacaccaaagtcaactaaaaaa tcagcgaagaaccagaaaaagaaaaaggaagagaaatctccgagtacaaaacaaaatgat gcttctgaagaaaagaaaagttcaaagaccacaaaagatactgcagaaaagaaaccacag aaaacttttcacagtttttttgcaccaaaaactgaaccaaaagtggaagattcatcaagt gaagataaaaaatccagtgatgataagagtgtaaagaaggcttgtttgtcagagaagaga gagcatggaggatatgatccagccaaatcaaactatcatcccatcgaagatgcagtctgg acacgaaatgaaaaagttccctacctggctctagccaagacttttgaagcaattgagaac atttctggaagactgaaaacaatagagattctctgcaacttcttccggtcggtaatagct ctgagctccagtgatctggttcagtgtgtgtacctttgtctgaacaagttagccccggcg tacgaaggtctggagctgggaataggggagacagttctgatgaaggccattgcccaggca acaggtcgaggaattgacaaaattaaagctgatgctcaggagaaaggggacctaggacta gtggctgagacgagtaggagttcccagagaacgatgtttgctcctccaaagttgactgta ccagcagtgtttaataagctcaaagagatagcaggcatgtcaggcaatgcggccatgaca aagaagatagaaaagattaagggtatgtttgtggcatgccgacagtgtgaggcacggtac ctgatccgctcgctgggcgggaagctccggatcggccttgcggagcagagtgtgctgacc gccctgggaaatgctgtgttcaggacacctccaggtcaagaatttcctccggaagtattg gatgctggtaaaggtatgggagctgataccttgaaaaagaaaatggaggaatgtactctt gtaatcaagacaacctactgtgagtgtccaaattatgatgccattatcccagctttgata aagtatggcattgaggaactaccaaaccattgtaaacttaccccgggtgttccactcaaa cccatgttagcacatcctaccaaaggagttagtgaagttttcaaacgttttgacgaggca gacttcacatgtgaatataaatatgacggagagagagcacagattcacattctggagaat ggcgaggtacacatatacagcaggaactcggagaacaacacaagcaagtacccagacatc atcgccaggatccccaaggtacgaaacgactcggtcacatcctgtgtcatcgactcggag gctgttgcctgggatgcagagaagaaacagatccagccattccaagttcttagccacagg aagaggaaggatgctgatgcctcagaaattaagatccaagtgtgtgtgtatgcctttgac ctgctgtttctcaatggaaagtccctggtgaaggagcctttcaggaagaggagagaactc ctgcactcttcattcaaagaagtggagggagagtttgtatttgccaagtccatgatttca tcaaacactgacgagatcgcagagtttcttgacgaatctgttaaaggaaactgtgaaggt ctcatggtgaaaactctggatgtggatgccacctatgaaattgccaaaagatctcacaac tggctcaagctgaagaaggactacttggacggggttggggacaccctagacctggtggtg atggggggattcctggggacaggaaagaggaccggcaaatacgggggattcctactgggc tgctacgacgaagaaaatgaagagtttcaatccatatgcaagattggaacaggatttact gatgctgatttagaaaaacatgccacatttttcaaggaccatgtcacagaaaagcctaaa ccatattatcgctacgattcctctgtagaaccagaccactggtttgatgcagtgcaggtt tgggaggtcaagtgtgctgacctctctatatctcccacacatctcgccgctgcaggaatc gttgatccagagaaaggtatatccttgaggtttcctcggttcctgagaattagagatgac aagaaagcggaggatgccacttcagcctcccaggtggcagaactctacaaaagccaacaa caaattcaaaatcaacaaaaatctgaaaaggaggaggttgaagacttttattga

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