Crassostrea angulata (Portugese oyster): 128167217
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Entry
128167217 CDS
T09348
Name
(RefSeq) E3 ubiquitin-protein ligase Midline-1-like
KO
K12026
tripartite motif-containing protein 56 [EC:
2.3.2.27
]
Organism
canu
Crassostrea angulata (Portugese oyster)
Brite
KEGG Orthology (KO) [BR:
canu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
canu04121
]
128167217
Enzymes [BR:
canu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128167217
Ubiquitin system [BR:
canu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
128167217
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-B_box
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_3
zf-RING_2
zf-RING_5
zf-C3HC4_2
YdjO
DUF4200
zf-RING_6
Endonuclease_7
Motif
Other DBs
NCBI-GeneID:
128167217
NCBI-ProteinID:
XP_052688757
EnsemblRapid:
LOC128167217
LinkDB
All DBs
Position
10:38751998..38754854
Genome browser
AA seq
744 aa
AA seq
DB search
MDLTTSFTEDFLTCSICCKVYTKPVCLPCYHVFCESCLQTLIRKSIVEDKKPLCPICKKS
FKSESKFEYDHALMSLIEELSVTGNLLCSFCQLRSEQKEVVSKCLTCNELLCDVCSGSRH
TFTTLTANHKVVSYKDFLAGKYEAESTSIACNKHLGMSLEFYCRECRIPFCKECFYFEHR
AHDYVNVSLVKTGIERETEKVLENLSKTSDELKQREFSLASIENEIIENEKTTLEQVAIT
FDNFLDKLTCHRQIAENKIKQNSKEEKQKISTLIRQNSQTQKELKGIVSFYEKLLSSKRD
SKIICLGLDFKKSLSVVETLGNSEVNVSFIDIKKSDEKDFNAFDLKILQSNKMLGTDGMF
IHSHICDATKKPWSSSAVVKETKDVVLAQAPVLSEPEHQNNHEICIVSSKQEHLLHPSRK
PEKVYSAQIKDNEGSSSTERGKIGKDLEQKIRAKNVSDDKTVPRMHKDTSKNSASNSSNT
PTPEEWKQAELDLIPECSVAIDIYGRGEKPQKIVYTNVTWIDRSTFVVTDNENAKLIVIK
FAGEHVERHLIPVEDAVTVAKFYGYLAVKTQTGKVKILTYPGLEQKQTFDGVSAIASQSS
KLILVTNSYIEIFCNGKIEKKFSFKERGKEFKFNRVFEACYLPNQTFVVTDACDRCLFFI
NSEGNISNRVFYVESGSYGAISCDKNNFVYLASYNEDVVNVYNTEATCVRIISLCGVLFV
RSIDVLLGNQMLIATQDIVRLYHL
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atggacttgactacaagttttacagaggatttcctaacatgctcaatctgttgtaaagtc
tacactaaaccagtgtgtctgccttgttatcatgtattctgtgaatcgtgtttgcagacg
ctaatcagaaaatcaattgttgaggacaaaaagcccctttgtccaatctgtaagaaatcg
tttaaatcagagtcgaaatttgaatacgatcacgcgcttatgagtttaatcgaggaactc
tcagttacagggaatctgctatgttcgttttgccagctacggtcagagcagaaagaggta
gtgtcaaaatgtttaacatgtaacgaattgctatgtgacgtttgcagtggttcaagacac
accttcacaactttaacagccaatcacaaagttgtttcttacaaagattttttggcggga
aaatatgaagcggagagtacaagcatcgcatgcaataagcacctcggaatgagccttgag
ttttattgccgggaatgtcggatacccttctgcaaagagtgcttttattttgaacacaga
gcacatgattatgtcaatgtatcactggtgaaaacagggatagaaagggagacagaaaag
gtactagaaaacttgagtaaaaccagtgatgaattaaaacaaagagaattttctttagct
tcaatagaaaacgaaataatagaaaatgaaaagacaactttagagcaagttgcaatcact
ttcgacaacttcctcgacaaattgacttgtcatcgtcagattgctgagaataaaatcaaa
caaaactccaaagaagaaaaacagaaaatcagtactttaattcgtcagaactcccaaacc
caaaaagaattaaaagggattgtttccttttacgaaaaactcctatcaagcaaacgagat
tctaaaatcatctgtttaggactagatttcaaaaagagtcttagtgtggtcgagactctt
ggtaattcagaagtgaatgtctctttcatagatatcaagaagtctgacgaaaaagacttc
aatgcatttgatttgaaaatcctccaatcgaataaaatgcttgggacagatggaatgttt
atccattctcacatttgtgatgcgacaaaaaaaccatggtcttcgtctgctgtagtgaag
gagacgaaagatgtagtgcttgcccaggcacccgttctttcagaaccagaacatcaaaac
aaccacgaaatatgtattgtttcgagtaaacaagaacatcttctacacccctcaagaaaa
cctgagaaagtatattctgctcaaatcaaagataatgaaggtagttctagtactgaacgt
ggcaaaattggcaaagacctagaacagaaaataagggcaaaaaacgtatcagatgacaag
actgttcctcgcatgcacaaagatacatctaaaaattctgcttcgaacagctcaaataca
ccgactccagaggagtggaagcaagctgaactggatctgataccagaatgttcagtcgca
atagatatttatgggagaggggaaaagccacaaaaaatagtctacactaatgtgacatgg
atagacagatcgacgtttgtggtaactgacaatgaaaacgcaaaactcattgtcataaag
tttgcaggggaacacgtggaacggcatttgatacctgtagaggatgctgttactgttgct
aagttttatggttatctcgctgtgaagacgcagacaggcaaggtaaaaatcttgacttac
cctggacttgaacaaaaacaaacgtttgatggagtaagcgctattgcgtcacagtcgtcg
aagttgatattggtgacaaatagttatatcgagatcttctgtaacggtaaaatcgagaaa
aagttttcttttaaagaaaggggaaaggaattcaaatttaatcgggttttcgaagcatgc
tatcttccaaaccagacatttgtagttacagatgcttgtgatcggtgtctgtttttcatc
aacagtgaaggcaacataagcaacagagtcttttacgtggagtctgggtcctatggagca
atttcatgtgataaaaacaactttgtctatctggctagctataatgaggacgttgtgaat
gtctacaacacagaggcgacatgtgtgagaataatttctttatgtggagttttgtttgta
agaagtatagatgtgcttttggggaatcaaatgttgattgcaactcaagacatagtcaga
ctataccacctctag
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