KEGG   Crassostrea angulata (Portugese oyster): 128180971
Entry
128180971         CDS       T09348                                 
Name
(RefSeq) cullin-4A-like
  KO
K10609  cullin 4
Organism
canu  Crassostrea angulata (Portugese oyster)
Pathway
canu03420  Nucleotide excision repair
canu04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:canu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    128180971
  09124 Replication and repair
   03420 Nucleotide excision repair
    128180971
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:canu04121]
    128180971
   03400 DNA repair and recombination proteins [BR:canu03400]
    128180971
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:canu04147]
    128180971
Ubiquitin system [BR:canu04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   Cul4 complex
    Cullin
     128180971
DNA repair and recombination proteins [BR:canu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      128180971
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      128180971
Exosome [BR:canu04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   128180971
SSDB
Motif
Pfam: Cullin Cullin_Nedd8 Nnf1
Other DBs
NCBI-GeneID: 128180971
NCBI-ProteinID: XP_052705147
EnsemblRapid: LOC128180971
LinkDB
Position
4:complement(32490521..32505128)
AA seq 807 aa
MPLSNTNKPNLQDEQKLDGDENRKKRKLSEGISPPNHKRARENIDESQMTDSQRRANFSA
ISSPSNGLNKHVSPLANNKPGATKKLVIKNFREKPRLPENFQQQTWEKLKESVEAIQRST
SIRWSLEELYQAVENMCSHKMSAQLYDQLKEVCDKHVRCNVEQFKAENVGFEQFLKNVDG
CWQAHCRQMIMIRSIFLFLDRTYVLQTSSVMSIWDMGLELFRTHVMFHPLVQKRTVDGIL
QLIERERTGEAVDRQLIKSLLRMLSDLQMYVDAFEHSFLEATESLYAAEGQQLMQERDVP
EYLAYVDKRLHEEMERLLHYLDMSTKKPLVSCVEKQLLEKHLTQILQKGLDQLLTENRIK
DLTLMYQLFSRVKDGLKEMCTAFATYIKVTGKTIVMNPDNDAEKDKDMVQNLLDFKDKMD
NVIDVCLSKNEKFVNALKESFETFINQRQNKPAELIAKYVDTKLKAGNKEATEEELERLM
DKIMVLFRFIHGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKQECGAAFTSKLEG
MFKDMECSKDFNLSFKQHMQHVDSPGGIEMTVNILTMGYWPTYTPMEVHLPASMVKLQEI
FKTFFYSKHSGKKLQWQSTLGHCVLKAKFAGGEKKELQVSLFQTLCLLLFNDGDEFSFEE
IKTATAIEEGELKRTLQSLACGKARVLLKNPKGKDVENGDKFLFNGGFKHKLCRIKINQI
QMKETPEENTTTTERVFQDRQYQVDAAIVRIMKTRKTLTHNLLISELYNQLKFPVKPADL
KKRIESLIDRDYMERDKENQNQYHYVA
NT seq 2424 nt   +upstreamnt  +downstreamnt
atgcctctctcaaatactaataaaccaaatctgcaggacgagcagaaattggacggcgac
gaaaaccggaagaagcgtaaattgagcgagggcatatcacccccaaatcacaaaagggct
cgtgaaaatattgacgaatcgcagatgactgactcacagagaagagccaatttctctgct
atctcaagtccaagcaatggactcaataaacatgtgtcgccactggctaataataaacca
ggagcgactaagaaactagtgatcaagaacttcagagaaaaacccagacttccagagaat
ttccagcagcagacatgggagaagttgaaggagtctgtggaggccatacagaggagtacg
tcgattcgctggagtctggaggagctgtatcaggccgtggagaacatgtgctcccacaaa
atgtccgcccagctgtacgaccagctgaaggaagtctgtgataaacatgtacgctgcaac
gtggaacagttcaaagctgaaaatgttggatttgagcagttcctgaagaatgtggatggt
tgttggcaagctcattgccgtcaaatgattatgataaggagtattttcctgttcttggac
agaacctatgtgttacagacctcatctgttatgtcaatatgggacatgggtttggaactg
ttccggacacacgtcatgttccacccactggtacagaagagaacagtggacggcattcta
cagctgatagaaagggagagaactggggaagctgtggatcgacagctgatcaagagtctg
ctcaggatgttgtcggacttacagatgtatgttgatgcctttgagcactcgttcctggaa
gccacagaaagtctgtatgcagccgagggccagcaactgatgcaggagagggatgttcca
gagtacttggcctatgtggacaaaagactccatgaagagatggagagattgctacattac
ctcgacatgtctaccaaaaaaccacttgtcagctgtgtggagaaacagctcctggagaaa
catttaacacaaatactccaaaagggtttggaccagctgttgacagagaacagaatcaag
gatttgaccttgatgtaccaattgttttccagagtcaaagatggcctcaaggaaatgtgc
actgcttttgccacctatatcaaggtaacaggtaaaaccattgtgatgaacccggacaat
gatgccgagaaggacaaggacatggtccagaacttgctggatttcaaggacaagatggac
aacgttatagacgtatgtctatctaagaacgagaaatttgtcaacgccctgaaagagagc
tttgaaacctttatcaatcaacggcagaataaaccggcggaattaattgccaagtatgta
gataccaaactgaaggctggaaataaggaagccactgaagaggaattagagcgactgatg
gataaaatcatggtgctatttaggtttatacatggcaaagatgtgtttgaggcattctac
aaaaaggatctggccaagcgcctcttggtaggaaagagtgcttctgtggatgctgagaaa
tcaatgttatccaaacttaagcaagaatgtggagcagcttttaccagcaagctagaggga
atgttcaaggacatggaatgttccaaagatttcaatttgtctttcaaacagcacatgcag
catgtggacagtcccggaggcattgagatgacagtaaatattctcaccatgggttactgg
cctacttacacccccatggaggtccatctgcctgcatctatggtgaagctacaggaaata
ttcaagaccttcttctatagtaaacacagcggaaagaagttgcaatggcagtctaccctg
gggcactgtgtcttgaaagcaaagtttgccgggggagagaagaaggagctacaggtttcg
ctgttccaaaccctctgtcttctgctgtttaatgatggagatgagttttcttttgaggaa
attaaaacagccactgctattgaggaaggtgaactgaagagaaccttacagtcccttgcc
tgtggcaaagccagggtccttctgaaaaacccaaagggcaaggatgttgagaatggagac
aaattcttgttcaacggtggatttaaacacaaactctgtcgtatcaagatcaaccaaatt
cagatgaaggaaacaccggaggagaacacgacaaccacagagcgagtgttccaggaccga
cagtatcaagtggatgctgccattgtcagaataatgaagaccaggaaaacactaacccac
aacctcctgatctcagaactgtataaccagctcaaattccctgtcaaacctgcagacttg
aagaaaagaatagaaagtttgattgatagagactatatggaaagagacaaagaaaatcaa
aatcagtatcactatgtggcttga

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