Crassostrea angulata (Portugese oyster): 128180971
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Entry
128180971 CDS
T09348
Name
(RefSeq) cullin-4A-like
KO
K10609
cullin 4
Organism
canu
Crassostrea angulata (Portugese oyster)
Pathway
canu03420
Nucleotide excision repair
canu04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
canu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
128180971
09124 Replication and repair
03420 Nucleotide excision repair
128180971
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
canu04121
]
128180971
03400 DNA repair and recombination proteins [BR:
canu03400
]
128180971
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
canu04147
]
128180971
Ubiquitin system [BR:
canu04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul4 complex
Cullin
128180971
DNA repair and recombination proteins [BR:
canu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
128180971
TCR (transcription coupled repair) factors
Cul4-CSA complex
128180971
Exosome [BR:
canu04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
128180971
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
Nnf1
Motif
Other DBs
NCBI-GeneID:
128180971
NCBI-ProteinID:
XP_052705147
EnsemblRapid:
LOC128180971
LinkDB
All DBs
Position
4:complement(32490521..32505128)
Genome browser
AA seq
807 aa
AA seq
DB search
MPLSNTNKPNLQDEQKLDGDENRKKRKLSEGISPPNHKRARENIDESQMTDSQRRANFSA
ISSPSNGLNKHVSPLANNKPGATKKLVIKNFREKPRLPENFQQQTWEKLKESVEAIQRST
SIRWSLEELYQAVENMCSHKMSAQLYDQLKEVCDKHVRCNVEQFKAENVGFEQFLKNVDG
CWQAHCRQMIMIRSIFLFLDRTYVLQTSSVMSIWDMGLELFRTHVMFHPLVQKRTVDGIL
QLIERERTGEAVDRQLIKSLLRMLSDLQMYVDAFEHSFLEATESLYAAEGQQLMQERDVP
EYLAYVDKRLHEEMERLLHYLDMSTKKPLVSCVEKQLLEKHLTQILQKGLDQLLTENRIK
DLTLMYQLFSRVKDGLKEMCTAFATYIKVTGKTIVMNPDNDAEKDKDMVQNLLDFKDKMD
NVIDVCLSKNEKFVNALKESFETFINQRQNKPAELIAKYVDTKLKAGNKEATEEELERLM
DKIMVLFRFIHGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKQECGAAFTSKLEG
MFKDMECSKDFNLSFKQHMQHVDSPGGIEMTVNILTMGYWPTYTPMEVHLPASMVKLQEI
FKTFFYSKHSGKKLQWQSTLGHCVLKAKFAGGEKKELQVSLFQTLCLLLFNDGDEFSFEE
IKTATAIEEGELKRTLQSLACGKARVLLKNPKGKDVENGDKFLFNGGFKHKLCRIKINQI
QMKETPEENTTTTERVFQDRQYQVDAAIVRIMKTRKTLTHNLLISELYNQLKFPVKPADL
KKRIESLIDRDYMERDKENQNQYHYVA
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
atgcctctctcaaatactaataaaccaaatctgcaggacgagcagaaattggacggcgac
gaaaaccggaagaagcgtaaattgagcgagggcatatcacccccaaatcacaaaagggct
cgtgaaaatattgacgaatcgcagatgactgactcacagagaagagccaatttctctgct
atctcaagtccaagcaatggactcaataaacatgtgtcgccactggctaataataaacca
ggagcgactaagaaactagtgatcaagaacttcagagaaaaacccagacttccagagaat
ttccagcagcagacatgggagaagttgaaggagtctgtggaggccatacagaggagtacg
tcgattcgctggagtctggaggagctgtatcaggccgtggagaacatgtgctcccacaaa
atgtccgcccagctgtacgaccagctgaaggaagtctgtgataaacatgtacgctgcaac
gtggaacagttcaaagctgaaaatgttggatttgagcagttcctgaagaatgtggatggt
tgttggcaagctcattgccgtcaaatgattatgataaggagtattttcctgttcttggac
agaacctatgtgttacagacctcatctgttatgtcaatatgggacatgggtttggaactg
ttccggacacacgtcatgttccacccactggtacagaagagaacagtggacggcattcta
cagctgatagaaagggagagaactggggaagctgtggatcgacagctgatcaagagtctg
ctcaggatgttgtcggacttacagatgtatgttgatgcctttgagcactcgttcctggaa
gccacagaaagtctgtatgcagccgagggccagcaactgatgcaggagagggatgttcca
gagtacttggcctatgtggacaaaagactccatgaagagatggagagattgctacattac
ctcgacatgtctaccaaaaaaccacttgtcagctgtgtggagaaacagctcctggagaaa
catttaacacaaatactccaaaagggtttggaccagctgttgacagagaacagaatcaag
gatttgaccttgatgtaccaattgttttccagagtcaaagatggcctcaaggaaatgtgc
actgcttttgccacctatatcaaggtaacaggtaaaaccattgtgatgaacccggacaat
gatgccgagaaggacaaggacatggtccagaacttgctggatttcaaggacaagatggac
aacgttatagacgtatgtctatctaagaacgagaaatttgtcaacgccctgaaagagagc
tttgaaacctttatcaatcaacggcagaataaaccggcggaattaattgccaagtatgta
gataccaaactgaaggctggaaataaggaagccactgaagaggaattagagcgactgatg
gataaaatcatggtgctatttaggtttatacatggcaaagatgtgtttgaggcattctac
aaaaaggatctggccaagcgcctcttggtaggaaagagtgcttctgtggatgctgagaaa
tcaatgttatccaaacttaagcaagaatgtggagcagcttttaccagcaagctagaggga
atgttcaaggacatggaatgttccaaagatttcaatttgtctttcaaacagcacatgcag
catgtggacagtcccggaggcattgagatgacagtaaatattctcaccatgggttactgg
cctacttacacccccatggaggtccatctgcctgcatctatggtgaagctacaggaaata
ttcaagaccttcttctatagtaaacacagcggaaagaagttgcaatggcagtctaccctg
gggcactgtgtcttgaaagcaaagtttgccgggggagagaagaaggagctacaggtttcg
ctgttccaaaccctctgtcttctgctgtttaatgatggagatgagttttcttttgaggaa
attaaaacagccactgctattgaggaaggtgaactgaagagaaccttacagtcccttgcc
tgtggcaaagccagggtccttctgaaaaacccaaagggcaaggatgttgagaatggagac
aaattcttgttcaacggtggatttaaacacaaactctgtcgtatcaagatcaaccaaatt
cagatgaaggaaacaccggaggagaacacgacaaccacagagcgagtgttccaggaccga
cagtatcaagtggatgctgccattgtcagaataatgaagaccaggaaaacactaacccac
aacctcctgatctcagaactgtataaccagctcaaattccctgtcaaacctgcagacttg
aagaaaagaatagaaagtttgattgatagagactatatggaaagagacaaagaaaatcaa
aatcagtatcactatgtggcttga
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integrated database retrieval system